RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 CAPN2P17655 700 aa14.35□□□□□ -0.11
USP30-201ENST00000257548 MARCKSP29966 332 aaPredicted RBP14.35□□□□□ -0.11
USP30-201ENST00000257548 IRX3P78415 501 aaPredicted RBP14.35□□□□□ -0.11
USP30-201ENST00000257548 AXDND1Q5T1B0 1012 aaPredicted RBP14.35□□□□□ -0.11
USP30-201ENST00000257548 KLHDC4Q8TBB5 520 aa14.35□□□□□ -0.11
USP30-201ENST00000257548 NCOA5Q9HCD5 579 aaKnown RBP14.35□□□□□ -0.11
USP30-201ENST00000257548 PUF60Q9UHX1 559 aaKnown RBP14.35□□□□□ -0.11
USP30-201ENST00000257548 RGS12O14924 1447 aa14.35□□□□□ -0.11
USP30-201ENST00000257548 ANKRD7Q92527 254 aa14.35□□□□□ -0.11
USP30-201ENST00000257548 RABEP2Q9H5N1 569 aa14.35□□□□□ -0.11
USP30-201ENST00000257548 YTHDC2Q9H6S0 1430 aaKnown RBP14.35□□□□□ -0.11
USP30-201ENST00000257548 SBNO2Q9Y2G9 1366 aa14.35□□□□□ -0.11
USP30-201ENST00000257548 GSDMDP57764 484 aa14.35□□□□□ -0.11
USP30-201ENST00000257548 Q6ZUG5 572 aa14.35□□□□□ -0.11
USP30-201ENST00000257548 VPS18Q9P253 973 aa14.35□□□□□ -0.11
USP30-201ENST00000257548 CASQ1P31415 396 aa14.34□□□□□ -0.11
USP30-201ENST00000257548 KLHL10Q6JEL2 608 aa14.34□□□□□ -0.11
USP30-201ENST00000257548 SRRTQ9BXP5 876 aaKnown RBP14.34□□□□□ -0.11
USP30-201ENST00000257548 CCDC12Q8WUD4 166 aaPredicted RBP14.34□□□□□ -0.11
USP30-201ENST00000257548 SLFN14P0C7P3 912 aa14.33□□□□□ -0.11
USP30-201ENST00000257548 GTF2A1P52655 376 aaPredicted RBP14.33□□□□□ -0.11
USP30-201ENST00000257548 HAND2P61296 217 aa14.33□□□□□ -0.11
USP30-201ENST00000257548 CCDC129Q6ZRS4 1044 aa14.33□□□□□ -0.11
USP30-201ENST00000257548 DDX46Q7L014 1031 aaKnown RBP14.33□□□□□ -0.11
USP30-201ENST00000257548 DNAAF4Q8WXU2 420 aa14.33□□□□□ -0.11
USP30-201ENST00000257548 NEK1Q96PY6 1258 aa14.33□□□□□ -0.11
USP30-201ENST00000257548 RASSF4Q9H2L5 321 aa14.33□□□□□ -0.11
USP30-201ENST00000257548 UBASH3AP57075 661 aa14.33□□□□□ -0.12
USP30-201ENST00000257548 NEXNQ0ZGT2 675 aa14.33□□□□□ -0.12
USP30-201ENST00000257548 USP44Q9H0E7 712 aa14.33□□□□□ -0.12
USP30-201ENST00000257548 OAS2P29728 719 aaKnown RBP14.33□□□□□ -0.12
USP30-201ENST00000257548 CWF19L2Q2TBE0 894 aaKnown RBP14.33□□□□□ -0.12
USP30-201ENST00000257548 CCDC82Q8N4S0 544 aa14.33□□□□□ -0.12
USP30-201ENST00000257548 XPO4Q9C0E2 1151 aaKnown RBP14.33□□□□□ -0.12
USP30-201ENST00000257548 CHPF2Q9P2E5 772 aa14.33□□□□□ -0.12
USP30-201ENST00000257548 TSPOAP1O95153 1857 aa14.33□□□□□ -0.12
USP30-201ENST00000257548 HECW2Q9P2P5 1572 aa14.33□□□□□ -0.12
USP30-201ENST00000257548 QRICH2Q9H0J4 1663 aa14.32□□□□□ -0.12
USP30-201ENST00000257548 GNAT3A8MTJ3 354 aa14.32□□□□□ -0.12
USP30-201ENST00000257548 KIF4BQ2VIQ3 1234 aa14.32□□□□□ -0.12
USP30-201ENST00000257548 SIGLEC1Q9BZZ2 1709 aa14.32□□□□□ -0.12
USP30-201ENST00000257548 GLI2P10070 1586 aa14.32□□□□□ -0.12
USP30-201ENST00000257548 H0YHG0 523 aa14.32□□□□□ -0.12
USP30-201ENST00000257548 EVI5LQ96CN4 794 aa14.32□□□□□ -0.12
USP30-201ENST00000257548 LZTFL1Q9NQ48 299 aa14.32□□□□□ -0.12
USP30-201ENST00000257548 METP08581 1390 aa14.32□□□□□ -0.12
USP30-201ENST00000257548 NRXN1Q9ULB1 1477 aa14.32□□□□□ -0.12
USP30-201ENST00000257548 CLCN6P51797 869 aa14.32□□□□□ -0.12
USP30-201ENST00000257548 ZSCAN26Q16670 478 aa14.32□□□□□ -0.12
USP30-201ENST00000257548 APOBRQ0VD83 1088 aa14.31□□□□□ -0.12
USP30-201ENST00000257548 TXLNBQ8N3L3 684 aa14.31□□□□□ -0.12
USP30-201ENST00000257548 LSG1Q9H089 658 aaKnown RBP14.31□□□□□ -0.12
USP30-201ENST00000257548 JAKMIP3Q5VZ66 844 aa14.31□□□□□ -0.12
USP30-201ENST00000257548 OSBPL3Q9H4L5 887 aa14.31□□□□□ -0.12
USP30-201ENST00000257548 HDAC5Q9UQL6 1122 aa14.31□□□□□ -0.12
USP30-201ENST00000257548 HIP1O00291 1037 aa14.31□□□□□ -0.12
USP30-201ENST00000257548 RHOXF2BP0C7M4 288 aa14.31□□□□□ -0.12
USP30-201ENST00000257548 ZNF853P0CG23 659 aa14.31□□□□□ -0.12
USP30-201ENST00000257548 AKAP17AQ02040 695 aaKnown RBP14.31□□□□□ -0.12
USP30-201ENST00000257548 RALYLQ86SE5 291 aaKnown RBP14.31□□□□□ -0.12
USP30-201ENST00000257548 RHOXF2Q9BQY4 288 aa14.31□□□□□ -0.12
USP30-201ENST00000257548 DEF6Q9H4E7 631 aa14.31□□□□□ -0.12
USP30-201ENST00000257548 WASLO00401 505 aaPredicted RBP14.3□□□□□ -0.12
USP30-201ENST00000257548 CTAGE5O15320 804 aa14.3□□□□□ -0.12
USP30-201ENST00000257548 SLC27A2O14975 620 aa14.3□□□□□ -0.12
USP30-201ENST00000257548 NFXL1Q6ZNB6 911 aa14.3□□□□□ -0.12
USP30-201ENST00000257548 CCDC85AQ96PX6 553 aaPredicted RBP14.3□□□□□ -0.12
USP30-201ENST00000257548 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.3□□□□□ -0.12
USP30-201ENST00000257548 FKBP4Q02790 459 aaKnown RBP eCLIP14.3□□□□□ -0.12
USP30-201ENST00000257548 PPARDQ03181 441 aa14.3□□□□□ -0.12
USP30-201ENST00000257548 TSPYL1Q9H0U9 437 aa14.3□□□□□ -0.12
USP30-201ENST00000257548 CTIFO43310 598 aaKnown RBP14.29□□□□□ -0.12
USP30-201ENST00000257548 MPRIPQ6WCQ1 1025 aa14.29□□□□□ -0.12
USP30-201ENST00000257548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.29□□□□□ -0.12
USP30-201ENST00000257548 RASSF8Q8NHQ8 419 aa14.29□□□□□ -0.12
USP30-201ENST00000257548 CCP110O43303 1012 aa14.29□□□□□ -0.12
USP30-201ENST00000257548 SMC1AQ14683 1233 aaKnown RBP14.29□□□□□ -0.12
USP30-201ENST00000257548 C8orf76Q96K31 380 aa14.29□□□□□ -0.12
USP30-201ENST00000257548 DRC1Q96MC2 740 aa14.29□□□□□ -0.12
USP30-201ENST00000257548 CAMSAP1Q5T5Y3 1602 aa14.29□□□□□ -0.12
USP30-201ENST00000257548 PIP4K2AP48426 406 aaPredicted RBP14.29□□□□□ -0.12
USP30-201ENST00000257548 TRIM29Q14134 588 aa14.29□□□□□ -0.12
USP30-201ENST00000257548 NCBP3Q53F19 620 aaKnown RBP14.29□□□□□ -0.12
USP30-201ENST00000257548 C1orf141Q5JVX7 400 aa14.29□□□□□ -0.12
USP30-201ENST00000257548 ERC1Q8IUD2 1116 aa14.29□□□□□ -0.12
USP30-201ENST00000257548 MAP3K2Q9Y2U5 619 aa14.29□□□□□ -0.12
USP30-201ENST00000257548 MORC2Q9Y6X9 1032 aaPredicted RBP14.29□□□□□ -0.12
USP30-201ENST00000257548 ZSCAN12O43309 604 aa14.28□□□□□ -0.12
USP30-201ENST00000257548 GDAP1L1Q96MZ0 367 aa14.28□□□□□ -0.12
USP30-201ENST00000257548 USP28Q96RU2 1077 aa14.28□□□□□ -0.12
USP30-201ENST00000257548 PLEKHA4Q9H4M7 779 aa14.28□□□□□ -0.12
USP30-201ENST00000257548 PNMA6AP0CW24 399 aaPredicted RBP14.28□□□□□ -0.12
USP30-201ENST00000257548 TAF7LQ5H9L4 462 aa14.28□□□□□ -0.12
USP30-201ENST00000257548 MRPS27Q92552 414 aaKnown RBP14.28□□□□□ -0.12
USP30-201ENST00000257548 RPAP1Q9BWH6 1393 aaPredicted RBP14.28□□□□□ -0.12
USP30-201ENST00000257548 NEXMIFQ5QGS0 1516 aa14.28□□□□□ -0.12
USP30-201ENST00000257548 TRIM66O15016 1216 aa14.28□□□□□ -0.12
USP30-201ENST00000257548 CCDC150Q8NCX0 1101 aa14.28□□□□□ -0.12
USP30-201ENST00000257548 NOC3LQ8WTT2 800 aaKnown RBP14.28□□□□□ -0.12
USP30-201ENST00000257548 CHMP4CQ96CF2 233 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms