RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 COL15A1P39059 1388 aa19.83■□□□□ 0.77
UBQLN1-201ENST00000257468 PPP1R9BQ96SB3 815 aa19.83■□□□□ 0.76
UBQLN1-201ENST00000257468 ZBTB3Q9H5J0 574 aa19.83■□□□□ 0.76
UBQLN1-201ENST00000257468 TPCN1Q9ULQ1 816 aa19.83■□□□□ 0.76
UBQLN1-201ENST00000257468 FOXO4P98177 505 aa19.82■□□□□ 0.76
UBQLN1-201ENST00000257468 STRN4Q9NRL3 753 aa19.82■□□□□ 0.76
UBQLN1-201ENST00000257468 ATP5JP18859 108 aa19.82■□□□□ 0.76
UBQLN1-201ENST00000257468 CLCN1P35523 988 aa19.82■□□□□ 0.76
UBQLN1-201ENST00000257468 KCPQ6ZWJ8 1503 aa19.82■□□□□ 0.76
UBQLN1-201ENST00000257468 CCDC129Q6ZRS4 1044 aa19.81■□□□□ 0.76
UBQLN1-201ENST00000257468 SEC62Q99442 399 aaKnown RBP19.81■□□□□ 0.76
UBQLN1-201ENST00000257468 UBR2Q8IWV8 1755 aa19.81■□□□□ 0.76
UBQLN1-201ENST00000257468 NUP188Q5SRE5 1749 aa19.81■□□□□ 0.76
UBQLN1-201ENST00000257468 ANP32BQ92688 251 aaKnown RBP19.81■□□□□ 0.76
UBQLN1-201ENST00000257468 TJP1Q07157 1748 aa19.8■□□□□ 0.76
UBQLN1-201ENST00000257468 F13A1P00488 732 aa19.8■□□□□ 0.76
UBQLN1-201ENST00000257468 H7C1W4 665 aa19.79■□□□□ 0.76
UBQLN1-201ENST00000257468 TAF5LO75529 589 aa19.79■□□□□ 0.76
UBQLN1-201ENST00000257468 DDX46Q7L014 1031 aaKnown RBP19.79■□□□□ 0.76
UBQLN1-201ENST00000257468 RNF214Q8ND24 703 aa19.79■□□□□ 0.76
UBQLN1-201ENST00000257468 SHANK3Q9BYB0 1731 aa19.79■□□□□ 0.76
UBQLN1-201ENST00000257468 ZNF609O15014 1411 aa19.79■□□□□ 0.76
UBQLN1-201ENST00000257468 IL2RBP14784 551 aa19.79■□□□□ 0.76
UBQLN1-201ENST00000257468 ZSCAN31Q96LW9 406 aaPredicted RBP19.79■□□□□ 0.76
UBQLN1-201ENST00000257468 SH2B1Q9NRF2 756 aaPredicted RBP19.79■□□□□ 0.76
UBQLN1-201ENST00000257468 SLAIN2Q9P270 581 aa19.79■□□□□ 0.76
UBQLN1-201ENST00000257468 JCADQ9P266 1359 aa19.78■□□□□ 0.76
UBQLN1-201ENST00000257468 ERVV-2B6SEH9 535 aa19.78■□□□□ 0.76
UBQLN1-201ENST00000257468 SLFNL1Q499Z3 407 aa19.78■□□□□ 0.76
UBQLN1-201ENST00000257468 CWC25Q9NXE8 425 aaPredicted RBP19.78■□□□□ 0.76
UBQLN1-201ENST00000257468 SOS2Q07890 1332 aaPredicted RBP19.78■□□□□ 0.76
UBQLN1-201ENST00000257468 ZNF335Q9H4Z2 1342 aaPredicted RBP19.78■□□□□ 0.76
UBQLN1-201ENST00000257468 FIBPO43427 364 aa19.78■□□□□ 0.76
UBQLN1-201ENST00000257468 BLOC1S2Q6QNY1 142 aa19.78■□□□□ 0.76
UBQLN1-201ENST00000257468 ATG9AQ7Z3C6 839 aa19.78■□□□□ 0.76
UBQLN1-201ENST00000257468 ZNF594Q96JF6 807 aaPredicted RBP19.78■□□□□ 0.76
UBQLN1-201ENST00000257468 MTMR6Q9Y217 621 aa19.78■□□□□ 0.76
UBQLN1-201ENST00000257468 VPS37CA5D8V6 355 aaPredicted RBP19.77■□□□□ 0.76
UBQLN1-201ENST00000257468 NEUROD6Q96NK8 337 aa19.77■□□□□ 0.76
UBQLN1-201ENST00000257468 PAPPAQ13219 1627 aa19.77■□□□□ 0.76
UBQLN1-201ENST00000257468 PSMA5P28066 241 aa19.77■□□□□ 0.75
UBQLN1-201ENST00000257468 RNF20Q5VTR2 975 aa19.77■□□□□ 0.75
UBQLN1-201ENST00000257468 ZNF330Q9Y3S2 320 aaPredicted RBP19.77■□□□□ 0.75
UBQLN1-201ENST00000257468 ABCA3Q99758 1704 aa19.76■□□□□ 0.75
UBQLN1-201ENST00000257468 RPS6KB1P23443 525 aa19.76■□□□□ 0.75
UBQLN1-201ENST00000257468 TIMM10P62072 90 aa19.76■□□□□ 0.75
UBQLN1-201ENST00000257468 TOB2Q14106 344 aaPredicted RBP19.76■□□□□ 0.75
UBQLN1-201ENST00000257468 TMEM87AQ8NBN3 555 aa19.76■□□□□ 0.75
UBQLN1-201ENST00000257468 HAUS7Q99871 368 aa19.76■□□□□ 0.75
UBQLN1-201ENST00000257468 DNM1Q05193 864 aaKnown RBP19.76■□□□□ 0.75
UBQLN1-201ENST00000257468 LRRC24Q50LG9 513 aa19.76■□□□□ 0.75
UBQLN1-201ENST00000257468 STK3Q13188 491 aa19.75■□□□□ 0.75
UBQLN1-201ENST00000257468 NKX1-1Q15270 411 aaPredicted RBP19.75■□□□□ 0.75
UBQLN1-201ENST00000257468 CARD10Q9BWT7 1032 aa19.75■□□□□ 0.75
UBQLN1-201ENST00000257468 TOGARAM1Q9Y4F4 1720 aa19.74■□□□□ 0.75
UBQLN1-201ENST00000257468 SYAP1Q96A49 352 aaPredicted RBP19.74■□□□□ 0.75
UBQLN1-201ENST00000257468 EVA1CP58658 441 aa19.73■□□□□ 0.75
UBQLN1-201ENST00000257468 TSPY26PQ9H489 355 aa19.73■□□□□ 0.75
UBQLN1-201ENST00000257468 GOLIM4O00461 696 aa19.73■□□□□ 0.75
UBQLN1-201ENST00000257468 USPL1Q5W0Q7 1092 aa19.73■□□□□ 0.75
UBQLN1-201ENST00000257468 PUS3Q9BZE2 481 aaKnown RBP19.73■□□□□ 0.75
UBQLN1-201ENST00000257468 NHSL1Q5SYE7 1610 aa19.72■□□□□ 0.75
UBQLN1-201ENST00000257468 TNS2Q63HR2 1409 aa19.72■□□□□ 0.75
UBQLN1-201ENST00000257468 FERMT3Q86UX7 667 aa19.72■□□□□ 0.75
UBQLN1-201ENST00000257468 PDLIM2Q96JY6 352 aa19.72■□□□□ 0.75
UBQLN1-201ENST00000257468 HMG20BQ9P0W2 317 aa19.72■□□□□ 0.75
UBQLN1-201ENST00000257468 MCMDC2Q4G0Z9 681 aa19.72■□□□□ 0.75
UBQLN1-201ENST00000257468 CDC37L1Q7L3B6 337 aa19.72■□□□□ 0.75
UBQLN1-201ENST00000257468 CCDC191Q8NCU4 936 aa19.72■□□□□ 0.75
UBQLN1-201ENST00000257468 CCDC85AQ96PX6 553 aaPredicted RBP19.72■□□□□ 0.75
UBQLN1-201ENST00000257468 CYP21A2P08686 494 aa19.71■□□□□ 0.75
UBQLN1-201ENST00000257468 LARP1BQ659C4 914 aaKnown RBP19.71■□□□□ 0.75
UBQLN1-201ENST00000257468 FAM173BQ6P4H8 233 aa19.71■□□□□ 0.75
UBQLN1-201ENST00000257468 KBTBD3Q8NAB2 608 aa19.71■□□□□ 0.75
UBQLN1-201ENST00000257468 UBE2HP62256 183 aa19.71■□□□□ 0.75
UBQLN1-201ENST00000257468 TSGA10IPQ3SY00 556 aa19.71■□□□□ 0.75
UBQLN1-201ENST00000257468 ASAP1Q9ULH1 1129 aa19.71■□□□□ 0.75
UBQLN1-201ENST00000257468 ATP6V1DQ9Y5K8 247 aa19.71■□□□□ 0.75
UBQLN1-201ENST00000257468 LRRC2Q9BYS8 371 aa19.7■□□□□ 0.74
UBQLN1-201ENST00000257468 PAG1Q9NWQ8 432 aa19.7■□□□□ 0.74
UBQLN1-201ENST00000257468 TMOD3Q9NYL9 352 aa19.7■□□□□ 0.74
UBQLN1-201ENST00000257468 EYA2O00167 538 aa19.69■□□□□ 0.74
UBQLN1-201ENST00000257468 IL15P40933 162 aaPredicted RBP19.69■□□□□ 0.74
UBQLN1-201ENST00000257468 RFX7Q2KHR2 1363 aa19.69■□□□□ 0.74
UBQLN1-201ENST00000257468 ANKRD1Q15327 319 aa19.69■□□□□ 0.74
UBQLN1-201ENST00000257468 ZSCAN30Q86W11 494 aa19.69■□□□□ 0.74
UBQLN1-201ENST00000257468 NEK1Q96PY6 1258 aa19.69■□□□□ 0.74
UBQLN1-201ENST00000257468 A0A0G2JLW4 131 aa19.68■□□□□ 0.74
UBQLN1-201ENST00000257468 CCDC183Q5T5S1 534 aa19.68■□□□□ 0.74
UBQLN1-201ENST00000257468 DNAJC10Q8IXB1 793 aa19.68■□□□□ 0.74
UBQLN1-201ENST00000257468 A0A1B0GUL7 405 aa19.68■□□□□ 0.74
UBQLN1-201ENST00000257468 PHF14O94880 888 aa19.68■□□□□ 0.74
UBQLN1-201ENST00000257468 STOX1Q6ZVD7 989 aa19.68■□□□□ 0.74
UBQLN1-201ENST00000257468 NAP1L5Q96NT1 182 aaPredicted RBP19.68■□□□□ 0.74
UBQLN1-201ENST00000257468 ALDH8A1Q9H2A2 487 aaPredicted RBP19.68■□□□□ 0.74
UBQLN1-201ENST00000257468 U3KPZ7 1027 aaPredicted RBP19.68■□□□□ 0.74
UBQLN1-201ENST00000257468 Q6ZUG5 572 aa19.67■□□□□ 0.74
UBQLN1-201ENST00000257468 ISCA1Q9BUE6 129 aa19.67■□□□□ 0.74
UBQLN1-201ENST00000257468 PALLDQ8WX93 1383 aa19.67■□□□□ 0.74
UBQLN1-201ENST00000257468 SH3TC1Q8TE82 1336 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms