RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 RASSF8Q8NHQ8 419 aa11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 C8orf76Q96K31 380 aa11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 NBPF4Q96M43 638 aa11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 TM6SF1Q9BZW5 370 aa11.8□□□□□ -0.52
SEMA6A-201ENST00000257414 RPS6KB1P23443 525 aa11.79□□□□□ -0.52
SEMA6A-201ENST00000257414 REREQ9P2R6 1566 aa11.79□□□□□ -0.52
SEMA6A-201ENST00000257414 MCMDC2Q4G0Z9 681 aa11.79□□□□□ -0.52
SEMA6A-201ENST00000257414 TSC1Q92574 1164 aa11.79□□□□□ -0.52
SEMA6A-201ENST00000257414 SUCLG2Q96I99 432 aa11.79□□□□□ -0.52
SEMA6A-201ENST00000257414 PDLIM2Q96JY6 352 aa11.79□□□□□ -0.52
SEMA6A-201ENST00000257414 DDX21Q9NR30 783 aaKnown RBP eCLIP11.79□□□□□ -0.52
SEMA6A-201ENST00000257414 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
SEMA6A-201ENST00000257414 ADCK5Q3MIX3 580 aa11.79□□□□□ -0.52
SEMA6A-201ENST00000257414 TBC1D2BQ9UPU7 963 aa11.79□□□□□ -0.52
SEMA6A-201ENST00000257414 DIP2CQ9Y2E4 1556 aa11.78□□□□□ -0.52
SEMA6A-201ENST00000257414 ERICH2A1L162 156 aa11.78□□□□□ -0.52
SEMA6A-201ENST00000257414 SFPQP23246 707 aaKnown RBP eCLIP11.78□□□□□ -0.52
SEMA6A-201ENST00000257414 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.78□□□□□ -0.52
SEMA6A-201ENST00000257414 SNRKQ9NRH2 765 aa11.78□□□□□ -0.52
SEMA6A-201ENST00000257414 CD163L1Q9NR16 1453 aa11.78□□□□□ -0.52
SEMA6A-201ENST00000257414 BIN1O00499 593 aa11.78□□□□□ -0.52
SEMA6A-201ENST00000257414 PES1O00541 588 aaKnown RBP11.78□□□□□ -0.52
SEMA6A-201ENST00000257414 NEMFO60524 1076 aa11.78□□□□□ -0.52
SEMA6A-201ENST00000257414 TPM1P09493 284 aa11.78□□□□□ -0.52
SEMA6A-201ENST00000257414 HAND2P61296 217 aa11.78□□□□□ -0.52
SEMA6A-201ENST00000257414 KIF18AQ8NI77 898 aa11.78□□□□□ -0.52
SEMA6A-201ENST00000257414 CCDC94Q9BW85 323 aaPredicted RBP11.78□□□□□ -0.52
SEMA6A-201ENST00000257414 CNNM1Q9NRU3 951 aa11.78□□□□□ -0.52
SEMA6A-201ENST00000257414 RRP12Q5JTH9 1297 aaKnown RBP11.77□□□□□ -0.52
SEMA6A-201ENST00000257414 ZSWIM6Q9HCJ5 1215 aa11.77□□□□□ -0.52
SEMA6A-201ENST00000257414 ZHX1Q9UKY1 873 aaPredicted RBP11.77□□□□□ -0.52
SEMA6A-201ENST00000257414 GOLGA8BA8MQT2 603 aa11.77□□□□□ -0.52
SEMA6A-201ENST00000257414 SNRPA1P09661 255 aaKnown RBP11.77□□□□□ -0.52
SEMA6A-201ENST00000257414 TFCP2Q12800 502 aa11.77□□□□□ -0.52
SEMA6A-201ENST00000257414 LMBR1LQ6UX01 489 aa11.77□□□□□ -0.52
SEMA6A-201ENST00000257414 RAB11FIP4Q86YS3 637 aa11.77□□□□□ -0.52
SEMA6A-201ENST00000257414 STK11IPQ8N1F8 1099 aa11.77□□□□□ -0.52
SEMA6A-201ENST00000257414 CCP110O43303 1012 aa11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 POLR3DP05423 398 aaPredicted RBP11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 CCDC129Q6ZRS4 1044 aa11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 FAM177A1Q8N128 213 aaPredicted RBP11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 PI4K2BQ8TCG2 481 aa11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 TPCN1Q9ULQ1 816 aa11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 SMTNL1A8MU46 457 aa11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 GCP02774 474 aa11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 LIG1P18858 919 aa11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 CEP135Q66GS9 1140 aa11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 KIF6Q6ZMV9 814 aa11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 LEO1Q8WVC0 666 aaPredicted RBP11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 SYTL4Q96C24 671 aaPredicted RBP11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 EAF2Q96CJ1 260 aaPredicted RBP11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 ZBTB3Q9H5J0 574 aa11.77□□□□□ -0.53
SEMA6A-201ENST00000257414 CPS1P31327 1500 aa11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 AK9Q5TCS8 1911 aa11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 LARGE1O95461 756 aa11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 KRT28Q7Z3Y7 464 aa11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 TTC6Q86TZ1 520 aa11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 IFNL2Q8IZJ0 200 aa11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 CBX8Q9HC52 389 aa11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 A0A0D9SFI3 127 aa11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 SKILP12757 684 aa11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 APOBRQ0VD83 1088 aa11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 DHX8Q14562 1220 aaKnown RBP11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 TOM1L2Q6ZVM7 507 aa11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 EDC3Q96F86 508 aaKnown RBP11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 NDUFB9Q9Y6M9 179 aa11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 KIF2AO00139 706 aaPredicted RBP11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 CFAP100Q494V2 611 aa11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 NFATC2IPQ8NCF5 419 aa11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 ORC3Q9UBD5 711 aaPredicted RBP11.76□□□□□ -0.53
SEMA6A-201ENST00000257414 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 JAK2O60674 1132 aa11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 SLC3A2P08195 630 aaKnown RBP11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 TEX35Q5T0J7 233 aa11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 CGNQ9P2M7 1197 aaKnown RBP11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 PAXBP1Q9Y5B6 917 aa11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 USP16Q9Y5T5 823 aa11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 MAP2P11137 1827 aaKnown RBP11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 PTPDC1A2A3K4 754 aa11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 IDH1O75874 414 aaKnown RBP11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 CDKL5O76039 1030 aa11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 CHST3Q7LGC8 479 aa11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 TMC6Q7Z403 805 aa11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 CLSTN2Q9H4D0 955 aa11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 FRMPD1Q5SYB0 1578 aa11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 CBFA2T2O43439 604 aa11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 AOPEPQ8N6M6 819 aa11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 CRB1P82279 1406 aa11.75□□□□□ -0.53
SEMA6A-201ENST00000257414 GSDMDP57764 484 aa11.74□□□□□ -0.53
SEMA6A-201ENST00000257414 POLA2Q14181 598 aa11.74□□□□□ -0.53
SEMA6A-201ENST00000257414 SART3Q15020 963 aaKnown RBP11.74□□□□□ -0.53
SEMA6A-201ENST00000257414 MRPS27Q92552 414 aaKnown RBP11.74□□□□□ -0.53
SEMA6A-201ENST00000257414 DBNDD2Q9BQY9 259 aa11.74□□□□□ -0.53
SEMA6A-201ENST00000257414 CWC25Q9NXE8 425 aaPredicted RBP11.74□□□□□ -0.53
SEMA6A-201ENST00000257414 GIGYF1O75420 1035 aaPredicted RBP11.74□□□□□ -0.53
SEMA6A-201ENST00000257414 ISM2Q6H9L7 571 aa11.74□□□□□ -0.53
SEMA6A-201ENST00000257414 ZSCAN25Q6NSZ9 544 aa11.74□□□□□ -0.53
SEMA6A-201ENST00000257414 DHX32Q7L7V1 743 aaKnown RBP11.74□□□□□ -0.53
SEMA6A-201ENST00000257414 AKAP2Q9Y2D5 859 aa11.74□□□□□ -0.53
SEMA6A-201ENST00000257414 ZNF213O14771 459 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms