RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 DNAJC5Q9H3Z4 198 aa18.66■□□□□ 0.58
RFX1-201ENST00000254325 PAG1Q9NWQ8 432 aa18.66■□□□□ 0.58
RFX1-201ENST00000254325 EYA2O00167 538 aa18.66■□□□□ 0.58
RFX1-201ENST00000254325 ATP5JP18859 108 aa18.66■□□□□ 0.58
RFX1-201ENST00000254325 CCDC129Q6ZRS4 1044 aa18.66■□□□□ 0.58
RFX1-201ENST00000254325 IL25Q9H293 177 aa18.66■□□□□ 0.58
RFX1-201ENST00000254325 DBNLQ9UJU6 430 aaKnown RBP18.66■□□□□ 0.58
RFX1-201ENST00000254325 MEGF6O75095 1541 aa18.66■□□□□ 0.58
RFX1-201ENST00000254325 BRD1O95696 1058 aa18.66■□□□□ 0.58
RFX1-201ENST00000254325 KRT85P78386 507 aa18.66■□□□□ 0.58
RFX1-201ENST00000254325 OVOS2A0A0G2JMS6 1433 aa18.66■□□□□ 0.58
RFX1-201ENST00000254325 GNL2Q13823 731 aaKnown RBP18.65■□□□□ 0.58
RFX1-201ENST00000254325 DNTTIP2Q5QJE6 756 aaKnown RBP18.65■□□□□ 0.58
RFX1-201ENST00000254325 CHMP4CQ96CF2 233 aa18.65■□□□□ 0.58
RFX1-201ENST00000254325 PTPN12Q05209 780 aaKnown RBP18.65■□□□□ 0.58
RFX1-201ENST00000254325 CPLX1O14810 134 aa18.65■□□□□ 0.58
RFX1-201ENST00000254325 SYT1P21579 422 aa18.65■□□□□ 0.58
RFX1-201ENST00000254325 CUL4AQ13619 759 aa18.65■□□□□ 0.58
RFX1-201ENST00000254325 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.65■□□□□ 0.58
RFX1-201ENST00000254325 TBC1D2BQ9UPU7 963 aa18.65■□□□□ 0.58
RFX1-201ENST00000254325 CNPY2Q9Y2B0 182 aa18.65■□□□□ 0.58
RFX1-201ENST00000254325 ADCK5Q3MIX3 580 aa18.64■□□□□ 0.57
RFX1-201ENST00000254325 USP48Q86UV5 1035 aa18.64■□□□□ 0.57
RFX1-201ENST00000254325 ANKRD18BA2A2Z9 1011 aa18.64■□□□□ 0.57
RFX1-201ENST00000254325 LRRC2Q9BYS8 371 aa18.64■□□□□ 0.57
RFX1-201ENST00000254325 KDM6AO15550 1401 aaPredicted RBP18.64■□□□□ 0.57
RFX1-201ENST00000254325 A0A1B0GUL7 405 aa18.63■□□□□ 0.57
RFX1-201ENST00000254325 PIP4K2BP78356 416 aa18.63■□□□□ 0.57
RFX1-201ENST00000254325 MPHOSPH8Q99549 860 aa18.63■□□□□ 0.57
RFX1-201ENST00000254325 ASAP1Q9ULH1 1129 aa18.63■□□□□ 0.57
RFX1-201ENST00000254325 IDH1O75874 414 aaKnown RBP18.63■□□□□ 0.57
RFX1-201ENST00000254325 FSD2A1L4K1 749 aa18.63■□□□□ 0.57
RFX1-201ENST00000254325 KAZALD1Q96I82 304 aa18.62■□□□□ 0.57
RFX1-201ENST00000254325 CTNNA3Q9UI47 895 aa18.62■□□□□ 0.57
RFX1-201ENST00000254325 F13A1P00488 732 aa18.62■□□□□ 0.57
RFX1-201ENST00000254325 GAS2L3Q86XJ1 694 aa18.62■□□□□ 0.57
RFX1-201ENST00000254325 TM6SF1Q9BZW5 370 aa18.62■□□□□ 0.57
RFX1-201ENST00000254325 NBPF26B4DH59 902 aa18.62■□□□□ 0.57
RFX1-201ENST00000254325 TCIRG1Q13488 830 aa18.62■□□□□ 0.57
RFX1-201ENST00000254325 NBPF14Q5TI25 921 aa18.62■□□□□ 0.57
RFX1-201ENST00000254325 NBPF10Q6P3W6 841 aaKnown RBP18.62■□□□□ 0.57
RFX1-201ENST00000254325 NBPF15Q8N660 670 aa18.62■□□□□ 0.57
RFX1-201ENST00000254325 SF3A1Q15459 793 aaKnown RBP18.61■□□□□ 0.57
RFX1-201ENST00000254325 DCCP43146 1447 aa18.61■□□□□ 0.57
RFX1-201ENST00000254325 ESPNB1AK53 854 aa18.61■□□□□ 0.57
RFX1-201ENST00000254325 PRIM1P49642 420 aaKnown RBP18.61■□□□□ 0.57
RFX1-201ENST00000254325 CEBPZQ03701 1054 aaKnown RBP18.61■□□□□ 0.57
RFX1-201ENST00000254325 BRF1Q92994 677 aa18.61■□□□□ 0.57
RFX1-201ENST00000254325 ACSBG1Q96GR2 724 aa18.61■□□□□ 0.57
RFX1-201ENST00000254325 KBTBD3Q8NAB2 608 aa18.61■□□□□ 0.57
RFX1-201ENST00000254325 LRRC24Q50LG9 513 aa18.6■□□□□ 0.57
RFX1-201ENST00000254325 MAP4K1Q92918 833 aa18.6■□□□□ 0.57
RFX1-201ENST00000254325 SEC62Q99442 399 aaKnown RBP18.6■□□□□ 0.57
RFX1-201ENST00000254325 LETM1O95202 739 aaPredicted RBP18.6■□□□□ 0.57
RFX1-201ENST00000254325 ATP2B3Q16720 1220 aa18.6■□□□□ 0.57
RFX1-201ENST00000254325 USP42Q9H9J4 1324 aaKnown RBP18.6■□□□□ 0.57
RFX1-201ENST00000254325 HMGB1P09429 215 aaKnown RBP18.6■□□□□ 0.57
RFX1-201ENST00000254325 IMMTQ16891 758 aaKnown RBP18.6■□□□□ 0.57
RFX1-201ENST00000254325 DRC7Q8IY82 874 aa18.6■□□□□ 0.57
RFX1-201ENST00000254325 ZSWIM6Q9HCJ5 1215 aa18.6■□□□□ 0.57
RFX1-201ENST00000254325 Q6ZUG5 572 aa18.6■□□□□ 0.57
RFX1-201ENST00000254325 PDIA4P13667 645 aaKnown RBP18.59■□□□□ 0.57
RFX1-201ENST00000254325 RPS6KB1P23443 525 aa18.59■□□□□ 0.57
RFX1-201ENST00000254325 SLIT3O75094 1523 aa18.59■□□□□ 0.57
RFX1-201ENST00000254325 HAND2P61296 217 aa18.59■□□□□ 0.57
RFX1-201ENST00000254325 DNM1Q05193 864 aaKnown RBP18.59■□□□□ 0.57
RFX1-201ENST00000254325 ZSCAN25Q6NSZ9 544 aa18.59■□□□□ 0.57
RFX1-201ENST00000254325 SPATA32Q96LK8 384 aa18.59■□□□□ 0.57
RFX1-201ENST00000254325 UTYO14607 1347 aa18.59■□□□□ 0.57
RFX1-201ENST00000254325 LRSAM1Q6UWE0 723 aa18.59■□□□□ 0.57
RFX1-201ENST00000254325 ZNF589Q86UQ0 364 aaPredicted RBP18.59■□□□□ 0.57
RFX1-201ENST00000254325 DZIP3Q86Y13 1208 aaKnown RBP18.59■□□□□ 0.57
RFX1-201ENST00000254325 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.58■□□□□ 0.57
RFX1-201ENST00000254325 KIAA2012Q0VF49 1180 aa18.58■□□□□ 0.57
RFX1-201ENST00000254325 H7C1W4 665 aa18.58■□□□□ 0.57
RFX1-201ENST00000254325 CCT2P78371 535 aaKnown RBP18.58■□□□□ 0.57
RFX1-201ENST00000254325 HAUS7Q99871 368 aa18.58■□□□□ 0.57
RFX1-201ENST00000254325 ZDHHC9Q9Y397 364 aa18.58■□□□□ 0.57
RFX1-201ENST00000254325 IRS4O14654 1257 aaPredicted RBP18.58■□□□□ 0.56
RFX1-201ENST00000254325 DDB1Q16531 1140 aa18.58■□□□□ 0.56
RFX1-201ENST00000254325 ME3Q16798 604 aa18.58■□□□□ 0.56
RFX1-201ENST00000254325 CCDC183Q5T5S1 534 aa18.58■□□□□ 0.56
RFX1-201ENST00000254325 CPLX2Q6PUV4 134 aaKnown RBP18.58■□□□□ 0.56
RFX1-201ENST00000254325 NFXL1Q6ZNB6 911 aa18.58■□□□□ 0.56
RFX1-201ENST00000254325 TFIP11Q9UBB9 837 aaKnown RBP18.58■□□□□ 0.56
RFX1-201ENST00000254325 KIF1AQ12756 1690 aa18.58■□□□□ 0.56
RFX1-201ENST00000254325 RNF113AO15541 343 aaKnown RBP18.58■□□□□ 0.56
RFX1-201ENST00000254325 UBE2HP62256 183 aa18.57■□□□□ 0.56
RFX1-201ENST00000254325 VPS37DQ86XT2 251 aa18.57■□□□□ 0.56
RFX1-201ENST00000254325 PUS3Q9BZE2 481 aaKnown RBP18.57■□□□□ 0.56
RFX1-201ENST00000254325 CACNA1FO60840 1977 aa18.57■□□□□ 0.56
RFX1-201ENST00000254325 PPFIA3O75145 1194 aa18.57■□□□□ 0.56
RFX1-201ENST00000254325 GPT2Q8TD30 523 aa18.57■□□□□ 0.56
RFX1-201ENST00000254325 PIGBQ92521 554 aa18.57■□□□□ 0.56
RFX1-201ENST00000254325 CPDO75976 1380 aa18.56■□□□□ 0.56
RFX1-201ENST00000254325 NECTIN1Q15223 517 aa18.56■□□□□ 0.56
RFX1-201ENST00000254325 ADAMTSL3P82987 1691 aa18.56■□□□□ 0.56
RFX1-201ENST00000254325 TAF5LO75529 589 aa18.56■□□□□ 0.56
RFX1-201ENST00000254325 FAM208AQ9UK61 1670 aaKnown RBP18.56■□□□□ 0.56
RFX1-201ENST00000254325 TMEM63CQ9P1W3 806 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms