RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 ARHGEF10O15013 1369 aa22.3■■□□□ 1.16
PPFIA1-201ENST00000253925 MINDY4BA8MYZ0 360 aa22.3■■□□□ 1.16
PPFIA1-201ENST00000253925 SHROOM2Q13796 1616 aa22.3■■□□□ 1.16
PPFIA1-201ENST00000253925 BIN1O00499 593 aa22.3■■□□□ 1.16
PPFIA1-201ENST00000253925 CCDC186Q7Z3E2 898 aa22.3■■□□□ 1.16
PPFIA1-201ENST00000253925 USP19O94966 1318 aa22.3■■□□□ 1.16
PPFIA1-201ENST00000253925 RNMTO43148 476 aaKnown RBP22.3■■□□□ 1.16
PPFIA1-201ENST00000253925 TMCO3Q6UWJ1 677 aa22.3■■□□□ 1.16
PPFIA1-201ENST00000253925 KCNG4Q8TDN1 519 aa22.3■■□□□ 1.16
PPFIA1-201ENST00000253925 EIF3JO75822 258 aaKnown RBP22.29■■□□□ 1.16
PPFIA1-201ENST00000253925 CDR1P51861 262 aa22.29■■□□□ 1.16
PPFIA1-201ENST00000253925 TMC6Q7Z403 805 aa22.29■■□□□ 1.16
PPFIA1-201ENST00000253925 KLF18A0A0U1RQI7 1052 aa22.29■■□□□ 1.16
PPFIA1-201ENST00000253925 METAP2P50579 478 aaKnown RBP eCLIP22.29■■□□□ 1.16
PPFIA1-201ENST00000253925 PPP4R3BQ5MIZ7 849 aa22.29■■□□□ 1.16
PPFIA1-201ENST00000253925 SNX14Q9Y5W7 946 aa22.29■■□□□ 1.16
PPFIA1-201ENST00000253925 AATKQ6ZMQ8 1374 aa22.28■■□□□ 1.16
PPFIA1-201ENST00000253925 MRPS27Q92552 414 aaKnown RBP22.28■■□□□ 1.16
PPFIA1-201ENST00000253925 RDXP35241 583 aaKnown RBP22.28■■□□□ 1.16
PPFIA1-201ENST00000253925 SKIDA1Q1XH10 827 aa22.28■■□□□ 1.16
PPFIA1-201ENST00000253925 GCP02774 474 aa22.28■■□□□ 1.16
PPFIA1-201ENST00000253925 LUC7LQ9NQ29 371 aaKnown RBP22.28■■□□□ 1.16
PPFIA1-201ENST00000253925 KIF1BO60333 1816 aa22.27■■□□□ 1.16
PPFIA1-201ENST00000253925 URI1O94763 535 aaPredicted RBP22.27■■□□□ 1.16
PPFIA1-201ENST00000253925 TMEM67Q5HYA8 995 aa22.27■■□□□ 1.16
PPFIA1-201ENST00000253925 IQCA1Q86XH1 822 aa22.27■■□□□ 1.16
PPFIA1-201ENST00000253925 CCDC150Q8NCX0 1101 aa22.27■■□□□ 1.16
PPFIA1-201ENST00000253925 BBXQ8WY36 941 aaPredicted RBP22.27■■□□□ 1.16
PPFIA1-201ENST00000253925 ZNF652Q9Y2D9 606 aa22.27■■□□□ 1.16
PPFIA1-201ENST00000253925 KCNA6P17658 529 aa22.27■■□□□ 1.16
PPFIA1-201ENST00000253925 GPTP24298 496 aa22.27■■□□□ 1.16
PPFIA1-201ENST00000253925 BICC1Q9H694 974 aaKnown RBP22.27■■□□□ 1.16
PPFIA1-201ENST00000253925 PPFIA3O75145 1194 aa22.27■■□□□ 1.16
PPFIA1-201ENST00000253925 CALRP27797 417 aaKnown RBP22.27■■□□□ 1.16
PPFIA1-201ENST00000253925 MICU3Q86XE3 530 aa22.27■■□□□ 1.16
PPFIA1-201ENST00000253925 CCDC82Q8N4S0 544 aa22.27■■□□□ 1.16
PPFIA1-201ENST00000253925 CHRNA2Q15822 529 aa22.26■■□□□ 1.15
PPFIA1-201ENST00000253925 CAVIN4Q5BKX8 364 aa22.26■■□□□ 1.15
PPFIA1-201ENST00000253925 CCDC102BQ68D86 513 aa22.26■■□□□ 1.15
PPFIA1-201ENST00000253925 TXLNBQ8N3L3 684 aa22.26■■□□□ 1.15
PPFIA1-201ENST00000253925 DNAJC25Q9H1X3 360 aa22.26■■□□□ 1.15
PPFIA1-201ENST00000253925 PAG1Q9NWQ8 432 aa22.26■■□□□ 1.15
PPFIA1-201ENST00000253925 FAM135BQ49AJ0 1406 aa22.26■■□□□ 1.15
PPFIA1-201ENST00000253925 CTCFLQ8NI51 663 aaPredicted RBP22.26■■□□□ 1.15
PPFIA1-201ENST00000253925 CCDC43Q96MW1 224 aaKnown RBP22.26■■□□□ 1.15
PPFIA1-201ENST00000253925 ANTXR1Q9H6X2 564 aa22.26■■□□□ 1.15
PPFIA1-201ENST00000253925 DEF6Q9H4E7 631 aa22.26■■□□□ 1.15
PPFIA1-201ENST00000253925 TET3O43151 1660 aa22.26■■□□□ 1.15
PPFIA1-201ENST00000253925 UNC13BO14795 1591 aa22.25■■□□□ 1.15
PPFIA1-201ENST00000253925 CPA1P15085 419 aa22.25■■□□□ 1.15
PPFIA1-201ENST00000253925 HSPA4P34932 840 aa22.25■■□□□ 1.15
PPFIA1-201ENST00000253925 CADPS2Q86UW7 1296 aa22.25■■□□□ 1.15
PPFIA1-201ENST00000253925 KLHL10Q6JEL2 608 aa22.25■■□□□ 1.15
PPFIA1-201ENST00000253925 SPDYE4A6NLX3 237 aa22.25■■□□□ 1.15
PPFIA1-201ENST00000253925 CEP135Q66GS9 1140 aa22.25■■□□□ 1.15
PPFIA1-201ENST00000253925 TRERF1Q96PN7 1200 aa22.25■■□□□ 1.15
PPFIA1-201ENST00000253925 BRD1O95696 1058 aa22.25■■□□□ 1.15
PPFIA1-201ENST00000253925 UQCRFS1P1P0C7P4 283 aa22.25■■□□□ 1.15
PPFIA1-201ENST00000253925 NFATC2IPQ8NCF5 419 aa22.25■■□□□ 1.15
PPFIA1-201ENST00000253925 SNW1Q13573 536 aaKnown RBP22.24■■□□□ 1.15
PPFIA1-201ENST00000253925 DHX32Q7L7V1 743 aaKnown RBP22.24■■□□□ 1.15
PPFIA1-201ENST00000253925 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.24■■□□□ 1.15
PPFIA1-201ENST00000253925 CTDP1Q9Y5B0 961 aaPredicted RBP22.24■■□□□ 1.15
PPFIA1-201ENST00000253925 CFAP74Q9C0B2 1584 aa22.24■■□□□ 1.15
PPFIA1-201ENST00000253925 SSH2Q76I76 1423 aa22.24■■□□□ 1.15
PPFIA1-201ENST00000253925 MLH3Q9UHC1 1453 aa22.24■■□□□ 1.15
PPFIA1-201ENST00000253925 KRT18P05783 430 aaKnown RBP22.24■■□□□ 1.15
PPFIA1-201ENST00000253925 SYKP43405 635 aa22.23■■□□□ 1.15
PPFIA1-201ENST00000253925 CROCC2H7BZ55 1655 aa22.23■■□□□ 1.15
PPFIA1-201ENST00000253925 IKQ13123 557 aaPredicted RBP22.23■■□□□ 1.15
PPFIA1-201ENST00000253925 ZFYVE16Q7Z3T8 1539 aa22.23■■□□□ 1.15
PPFIA1-201ENST00000253925 NBPF7P0C2Y1 421 aaPredicted RBP22.23■■□□□ 1.15
PPFIA1-201ENST00000253925 ATP7BP35670 1465 aa22.23■■□□□ 1.15
PPFIA1-201ENST00000253925 EIF5P55010 431 aaKnown RBP22.23■■□□□ 1.15
PPFIA1-201ENST00000253925 ATP2B3Q16720 1220 aa22.23■■□□□ 1.15
PPFIA1-201ENST00000253925 KIF5CO60282 957 aa22.22■■□□□ 1.15
PPFIA1-201ENST00000253925 SKILP12757 684 aa22.22■■□□□ 1.15
PPFIA1-201ENST00000253925 TFCP2Q12800 502 aa22.22■■□□□ 1.15
PPFIA1-201ENST00000253925 RAB11FIP4Q86YS3 637 aa22.22■■□□□ 1.15
PPFIA1-201ENST00000253925 GOLGA6L9A6NEM1 432 aa22.22■■□□□ 1.15
PPFIA1-201ENST00000253925 KANK3Q6NY19 840 aa22.22■■□□□ 1.15
PPFIA1-201ENST00000253925 PIBF1Q8WXW3 757 aa22.22■■□□□ 1.15
PPFIA1-201ENST00000253925 RANBP6O60518 1105 aaKnown RBP22.22■■□□□ 1.15
PPFIA1-201ENST00000253925 MFSD6Q6ZSS7 791 aa22.22■■□□□ 1.15
PPFIA1-201ENST00000253925 ZCRB1Q8TBF4 217 aaKnown RBP22.22■■□□□ 1.15
PPFIA1-201ENST00000253925 SSH3Q8TE77 659 aa22.22■■□□□ 1.15
PPFIA1-201ENST00000253925 RPS6KB1P23443 525 aa22.21■■□□□ 1.15
PPFIA1-201ENST00000253925 CASQ1P31415 396 aa22.21■■□□□ 1.15
PPFIA1-201ENST00000253925 DCAF5Q96JK2 942 aa22.21■■□□□ 1.15
PPFIA1-201ENST00000253925 ALG1Q9BT22 464 aa22.21■■□□□ 1.15
PPFIA1-201ENST00000253925 GBP3Q9H0R5 595 aa22.21■■□□□ 1.15
PPFIA1-201ENST00000253925 RNF113AO15541 343 aaKnown RBP22.21■■□□□ 1.15
PPFIA1-201ENST00000253925 AXDND1Q5T1B0 1012 aaPredicted RBP22.21■■□□□ 1.15
PPFIA1-201ENST00000253925 IQCEQ6IPM2 695 aa22.21■■□□□ 1.15
PPFIA1-201ENST00000253925 CATIPQ7Z7H3 387 aa22.21■■□□□ 1.15
PPFIA1-201ENST00000253925 ZBTB43O43298 467 aa22.2■■□□□ 1.14
PPFIA1-201ENST00000253925 ATL3Q6DD88 541 aa22.2■■□□□ 1.14
PPFIA1-201ENST00000253925 CCDC144CPQ8IYA2 1237 aa22.2■■□□□ 1.14
PPFIA1-201ENST00000253925 SLC26A6Q9BXS9 759 aa22.2■■□□□ 1.14
PPFIA1-201ENST00000253925 USP44Q9H0E7 712 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms