RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 REM2Q8IYK8 340 aaPredicted RBP16.05■□□□□ 0.16
RFPL3-201ENST00000249007 PIAS4Q8N2W9 510 aaPredicted RBP16.05■□□□□ 0.16
RFPL3-201ENST00000249007 TRIOBPQ9H2D6 2365 aa16.05■□□□□ 0.16
RFPL3-201ENST00000249007 NUP98P52948 1817 aa16.05■□□□□ 0.16
RFPL3-201ENST00000249007 UBN2Q6ZU65 1347 aa16.05■□□□□ 0.16
RFPL3-201ENST00000249007 KIAA0100Q14667 2235 aaKnown RBP16.04■□□□□ 0.16
RFPL3-201ENST00000249007 ERVV-1B6SEH8 477 aa16.04■□□□□ 0.16
RFPL3-201ENST00000249007 ADM5C9JUS6 153 aa16.04■□□□□ 0.16
RFPL3-201ENST00000249007 NGEFQ8N5V2 710 aa16.04■□□□□ 0.16
RFPL3-201ENST00000249007 DCPSQ96C86 337 aaKnown RBP16.04■□□□□ 0.16
RFPL3-201ENST00000249007 TBC1D10BQ4KMP7 808 aaPredicted RBP16.03■□□□□ 0.16
RFPL3-201ENST00000249007 SUSD4Q5VX71 490 aa16.03■□□□□ 0.16
RFPL3-201ENST00000249007 ZNF296Q8WUU4 475 aaPredicted RBP16.03■□□□□ 0.16
RFPL3-201ENST00000249007 MAP3K15Q6ZN16 1313 aa16.03■□□□□ 0.16
RFPL3-201ENST00000249007 YDJCA8MPS7 323 aa16.03■□□□□ 0.16
RFPL3-201ENST00000249007 FXR1P51114 621 aaKnown RBP eCLIP16.03■□□□□ 0.16
RFPL3-201ENST00000249007 MPNDQ8N594 471 aa16.03■□□□□ 0.16
RFPL3-201ENST00000249007 DPF2Q92785 391 aa16.03■□□□□ 0.16
RFPL3-201ENST00000249007 NLRP3Q96P20 1036 aa16.03■□□□□ 0.16
RFPL3-201ENST00000249007 ZBTB12Q9Y330 459 aaPredicted RBP16.03■□□□□ 0.16
RFPL3-201ENST00000249007 ABCC4O15439 1325 aa16.02■□□□□ 0.16
RFPL3-201ENST00000249007 EGFRP00533 1210 aa16.02■□□□□ 0.15
RFPL3-201ENST00000249007 FBXO46Q6PJ61 603 aaPredicted RBP16.02■□□□□ 0.15
RFPL3-201ENST00000249007 KIF6Q6ZMV9 814 aa16.02■□□□□ 0.15
RFPL3-201ENST00000249007 NTSR2O95665 410 aa16.01■□□□□ 0.15
RFPL3-201ENST00000249007 RASAL3Q86YV0 1011 aa16.01■□□□□ 0.15
RFPL3-201ENST00000249007 BBOX1O75936 387 aa16■□□□□ 0.15
RFPL3-201ENST00000249007 TBC1D8O95759 1140 aa16■□□□□ 0.15
RFPL3-201ENST00000249007 RBM26Q5T8P6 1007 aaKnown RBP16■□□□□ 0.15
RFPL3-201ENST00000249007 SULF1Q8IWU6 871 aa16■□□□□ 0.15
RFPL3-201ENST00000249007 SP8Q8IXZ3 490 aa16■□□□□ 0.15
RFPL3-201ENST00000249007 PHACTR3Q96KR7 559 aa16■□□□□ 0.15
RFPL3-201ENST00000249007 ZBTB3Q9H5J0 574 aa16■□□□□ 0.15
RFPL3-201ENST00000249007 COL3A1P02461 1466 aaPredicted RBP16■□□□□ 0.15
RFPL3-201ENST00000249007 PSMD14O00487 310 aa15.99■□□□□ 0.15
RFPL3-201ENST00000249007 EIF4G2P78344 907 aaKnown RBP eCLIP15.99■□□□□ 0.15
RFPL3-201ENST00000249007 TTLL7Q6ZT98 887 aa15.99■□□□□ 0.15
RFPL3-201ENST00000249007 MCM10Q7L590 875 aa15.99■□□□□ 0.15
RFPL3-201ENST00000249007 RTF1Q92541 710 aaKnown RBP15.99■□□□□ 0.15
RFPL3-201ENST00000249007 RANBP2P49792 3224 aaKnown RBP15.98■□□□□ 0.15
RFPL3-201ENST00000249007 PPP1R42Q7Z4L9 355 aa15.98■□□□□ 0.15
RFPL3-201ENST00000249007 ZNF34Q8IZ26 560 aa15.98■□□□□ 0.15
RFPL3-201ENST00000249007 GGA3Q9NZ52 723 aa15.98■□□□□ 0.15
RFPL3-201ENST00000249007 LAMB4A4D0S4 1761 aa15.98■□□□□ 0.15
RFPL3-201ENST00000249007 HSPA5P11021 654 aaKnown RBP15.97■□□□□ 0.15
RFPL3-201ENST00000249007 PRKAR2BP31323 418 aa15.97■□□□□ 0.15
RFPL3-201ENST00000249007 CDCA5Q96FF9 252 aa15.97■□□□□ 0.15
RFPL3-201ENST00000249007 GPR25O00155 361 aa15.97■□□□□ 0.15
RFPL3-201ENST00000249007 RPS12P25398 132 aaKnown RBP15.97■□□□□ 0.15
RFPL3-201ENST00000249007 RRP7AQ9Y3A4 280 aaKnown RBP15.97■□□□□ 0.15
RFPL3-201ENST00000249007 KIF4BQ2VIQ3 1234 aa15.96■□□□□ 0.14
RFPL3-201ENST00000249007 PARP10Q53GL7 1025 aa15.96■□□□□ 0.14
RFPL3-201ENST00000249007 NOM1Q5C9Z4 860 aaKnown RBP15.96■□□□□ 0.14
RFPL3-201ENST00000249007 MYL6BP14649 208 aa15.95■□□□□ 0.14
RFPL3-201ENST00000249007 FKBP1BP68106 108 aa15.95■□□□□ 0.14
RFPL3-201ENST00000249007 SLC10A5Q5PT55 438 aa15.95■□□□□ 0.14
RFPL3-201ENST00000249007 CC2D1BQ5T0F9 858 aaKnown RBP15.95■□□□□ 0.14
RFPL3-201ENST00000249007 GIGYF2Q6Y7W6 1299 aaKnown RBP15.95■□□□□ 0.14
RFPL3-201ENST00000249007 DBNDD1Q9H9R9 158 aa15.95■□□□□ 0.14
RFPL3-201ENST00000249007 TIMELESSQ9UNS1 1208 aa15.95■□□□□ 0.14
RFPL3-201ENST00000249007 DUOX1Q9NRD9 1551 aa15.95■□□□□ 0.14
RFPL3-201ENST00000249007 DCTN1Q14203 1278 aa15.94■□□□□ 0.14
RFPL3-201ENST00000249007 WASHC4Q2M389 1173 aa15.94■□□□□ 0.14
RFPL3-201ENST00000249007 UTP14AQ9BVJ6 771 aaKnown RBP15.94■□□□□ 0.14
RFPL3-201ENST00000249007 RSPH6AQ9H0K4 717 aa15.94■□□□□ 0.14
RFPL3-201ENST00000249007 ASTN2O75129 1339 aaPredicted RBP15.94■□□□□ 0.14
RFPL3-201ENST00000249007 PAPPA2Q9BXP8 1791 aa15.93■□□□□ 0.14
RFPL3-201ENST00000249007 POTEFA5A3E0 1075 aa15.93■□□□□ 0.14
RFPL3-201ENST00000249007 DDX46Q7L014 1031 aaKnown RBP15.93■□□□□ 0.14
RFPL3-201ENST00000249007 PCGF6Q9BYE7 350 aa15.93■□□□□ 0.14
RFPL3-201ENST00000249007 FKTNO75072 461 aa15.92■□□□□ 0.14
RFPL3-201ENST00000249007 GRAPQ13588 217 aa15.92■□□□□ 0.14
RFPL3-201ENST00000249007 TAF7Q15545 349 aaPredicted RBP15.92■□□□□ 0.14
RFPL3-201ENST00000249007 INTS3Q68E01 1043 aaKnown RBP15.92■□□□□ 0.14
RFPL3-201ENST00000249007 GRAPLQ8TC17 118 aaPredicted RBP15.92■□□□□ 0.14
RFPL3-201ENST00000249007 MIS18AQ9NYP9 233 aa15.92■□□□□ 0.14
RFPL3-201ENST00000249007 RTL9Q8NET4 1388 aa15.91■□□□□ 0.14
RFPL3-201ENST00000249007 COL6A3P12111 3177 aa15.91■□□□□ 0.14
RFPL3-201ENST00000249007 LAMB2P55268 1798 aa15.91■□□□□ 0.14
RFPL3-201ENST00000249007 ANKRD36CQ5JPF3 1778 aa15.91■□□□□ 0.14
RFPL3-201ENST00000249007 RIMBP2O15034 1052 aa15.91■□□□□ 0.14
RFPL3-201ENST00000249007 HCLS1P14317 486 aaPredicted RBP15.91■□□□□ 0.14
RFPL3-201ENST00000249007 TM4SF4P48230 202 aa15.91■□□□□ 0.14
RFPL3-201ENST00000249007 ANGEL2Q5VTE6 544 aaKnown RBP15.91■□□□□ 0.14
RFPL3-201ENST00000249007 TMC4Q7Z404 712 aa15.91■□□□□ 0.14
RFPL3-201ENST00000249007 KCNQ5Q9NR82 932 aa15.91■□□□□ 0.14
RFPL3-201ENST00000249007 COLQQ9Y215 455 aaPredicted RBP15.91■□□□□ 0.14
RFPL3-201ENST00000249007 ECE2O60344 883 aa15.9■□□□□ 0.14
RFPL3-201ENST00000249007 MOB2Q70IA6 237 aa15.9■□□□□ 0.14
RFPL3-201ENST00000249007 NSFL1CQ9UNZ2 370 aaKnown RBP15.9■□□□□ 0.14
RFPL3-201ENST00000249007 LRRC37AA6NMS7 1700 aa15.9■□□□□ 0.14
RFPL3-201ENST00000249007 TAF1P21675 1872 aa15.89■□□□□ 0.13
RFPL3-201ENST00000249007 UBE2Q2LH0YL09 131 aa15.89■□□□□ 0.13
RFPL3-201ENST00000249007 DLL1O00548 723 aa15.89■□□□□ 0.13
RFPL3-201ENST00000249007 HTATSF1O43719 755 aaKnown RBP15.89■□□□□ 0.13
RFPL3-201ENST00000249007 C6orf229H3BNL8 230 aa15.88■□□□□ 0.13
RFPL3-201ENST00000249007 SREBF2Q12772 1141 aa15.88■□□□□ 0.13
RFPL3-201ENST00000249007 SCARF1Q14162 830 aa15.88■□□□□ 0.13
RFPL3-201ENST00000249007 DOK7Q18PE1 504 aa15.88■□□□□ 0.13
RFPL3-201ENST00000249007 CFHR5Q9BXR6 569 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms