RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 ST5P78524 1137 aa14.32□□□□□ -0.12
TREM1-201ENST00000244709 POLA2Q14181 598 aa14.32□□□□□ -0.12
TREM1-201ENST00000244709 TTLL11Q8NHH1 800 aa14.32□□□□□ -0.12
TREM1-201ENST00000244709 SSH3Q8TE77 659 aa14.32□□□□□ -0.12
TREM1-201ENST00000244709 KDM2BQ8NHM5 1336 aa14.31□□□□□ -0.12
TREM1-201ENST00000244709 SPEF2Q9C093 1822 aa14.31□□□□□ -0.12
TREM1-201ENST00000244709 FAM161AQ3B820 660 aa14.31□□□□□ -0.12
TREM1-201ENST00000244709 RIC1Q4ADV7 1423 aa14.31□□□□□ -0.12
TREM1-201ENST00000244709 TAF1P21675 1872 aa14.31□□□□□ -0.12
TREM1-201ENST00000244709 MTFR1LQ9H019 292 aa14.3□□□□□ -0.12
TREM1-201ENST00000244709 GREM2Q9H772 168 aa14.3□□□□□ -0.12
TREM1-201ENST00000244709 RFX5P48382 616 aaPredicted RBP14.3□□□□□ -0.12
TREM1-201ENST00000244709 PA2G4Q9UQ80 394 aaKnown RBP14.3□□□□□ -0.12
TREM1-201ENST00000244709 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
TREM1-201ENST00000244709 COL11A2P13942 1736 aaPredicted RBP14.29□□□□□ -0.12
TREM1-201ENST00000244709 COL4A1P02462 1669 aa14.29□□□□□ -0.12
TREM1-201ENST00000244709 CCDC152Q4G0S7 254 aa14.29□□□□□ -0.12
TREM1-201ENST00000244709 KLHDC4Q8TBB5 520 aa14.29□□□□□ -0.12
TREM1-201ENST00000244709 NLRP3Q96P20 1036 aa14.29□□□□□ -0.12
TREM1-201ENST00000244709 ITGA6P23229 1130 aa14.28□□□□□ -0.12
TREM1-201ENST00000244709 SF3B3Q15393 1217 aaKnown RBP14.28□□□□□ -0.12
TREM1-201ENST00000244709 CENPQQ7L2Z9 268 aaPredicted RBP14.28□□□□□ -0.12
TREM1-201ENST00000244709 DCTPP1Q9H773 170 aa14.28□□□□□ -0.12
TREM1-201ENST00000244709 EXOC6BQ9Y2D4 811 aa14.28□□□□□ -0.12
TREM1-201ENST00000244709 LRP5O75197 1615 aa14.27□□□□□ -0.12
TREM1-201ENST00000244709 PTPN12Q05209 780 aaKnown RBP14.27□□□□□ -0.12
TREM1-201ENST00000244709 IFIT5Q13325 482 aaKnown RBP14.27□□□□□ -0.12
TREM1-201ENST00000244709 CCDC57Q2TAC2 916 aa14.27□□□□□ -0.12
TREM1-201ENST00000244709 ZNF594Q96JF6 807 aaPredicted RBP14.27□□□□□ -0.12
TREM1-201ENST00000244709 RTL9Q8NET4 1388 aa14.27□□□□□ -0.12
TREM1-201ENST00000244709 KIF13BQ9NQT8 1826 aa14.27□□□□□ -0.13
TREM1-201ENST00000244709 ANKRD18BA2A2Z9 1011 aa14.26□□□□□ -0.13
TREM1-201ENST00000244709 SMC5Q8IY18 1101 aa14.26□□□□□ -0.13
TREM1-201ENST00000244709 GCC1Q96CN9 775 aa14.26□□□□□ -0.13
TREM1-201ENST00000244709 BRIP1Q9BX63 1249 aa14.26□□□□□ -0.13
TREM1-201ENST00000244709 COPRSQ9NQ92 184 aa14.26□□□□□ -0.13
TREM1-201ENST00000244709 SEC31BQ9NQW1 1179 aa14.26□□□□□ -0.13
TREM1-201ENST00000244709 C10orf71Q711Q0 1435 aa14.26□□□□□ -0.13
TREM1-201ENST00000244709 SURF6O75683 361 aaKnown RBP14.26□□□□□ -0.13
TREM1-201ENST00000244709 POLD1P28340 1107 aa14.26□□□□□ -0.13
TREM1-201ENST00000244709 SIL1Q9H173 461 aa14.26□□□□□ -0.13
TREM1-201ENST00000244709 NOP58Q9Y2X3 529 aaKnown RBP14.26□□□□□ -0.13
TREM1-201ENST00000244709 CACNA1SQ13698 1873 aa14.26□□□□□ -0.13
TREM1-201ENST00000244709 APBB1O00213 710 aa14.25□□□□□ -0.13
TREM1-201ENST00000244709 SOCS7O14512 581 aa14.25□□□□□ -0.13
TREM1-201ENST00000244709 TAF7LQ5H9L4 462 aa14.25□□□□□ -0.13
TREM1-201ENST00000244709 SGIP1Q9BQI5 828 aa14.25□□□□□ -0.13
TREM1-201ENST00000244709 KLRG2A4D1S0 409 aaPredicted RBP14.24□□□□□ -0.13
TREM1-201ENST00000244709 CRY2Q49AN0 593 aa14.24□□□□□ -0.13
TREM1-201ENST00000244709 PDE6BP35913 854 aa14.23□□□□□ -0.13
TREM1-201ENST00000244709 PTGER2P43116 358 aa14.23□□□□□ -0.13
TREM1-201ENST00000244709 G3BP1Q13283 466 aaKnown RBP eCLIP14.23□□□□□ -0.13
TREM1-201ENST00000244709 OS9Q13438 667 aaPredicted RBP14.23□□□□□ -0.13
TREM1-201ENST00000244709 DDX46Q7L014 1031 aaKnown RBP14.23□□□□□ -0.13
TREM1-201ENST00000244709 RPGRQ92834 1020 aaKnown RBP14.23□□□□□ -0.13
TREM1-201ENST00000244709 PUS3Q9BZE2 481 aaKnown RBP14.23□□□□□ -0.13
TREM1-201ENST00000244709 A0A1B0GUL6 1792 aa14.23□□□□□ -0.13
TREM1-201ENST00000244709 DLEC1Q9Y238 1755 aa14.23□□□□□ -0.13
TREM1-201ENST00000244709 LRRC24Q50LG9 513 aa14.23□□□□□ -0.13
TREM1-201ENST00000244709 CELF1Q92879 486 aaKnown RBP14.23□□□□□ -0.13
TREM1-201ENST00000244709 CDC5LQ99459 802 aaKnown RBP14.23□□□□□ -0.13
TREM1-201ENST00000244709 KIAA1551Q9HCM1 1747 aa14.22□□□□□ -0.13
TREM1-201ENST00000244709 EYA2O00167 538 aa14.22□□□□□ -0.13
TREM1-201ENST00000244709 RAB11FIP3O75154 756 aa14.22□□□□□ -0.13
TREM1-201ENST00000244709 IGHMBP2P38935 993 aaKnown RBP14.22□□□□□ -0.13
TREM1-201ENST00000244709 HSP90AB4PQ58FF6 505 aa14.22□□□□□ -0.13
TREM1-201ENST00000244709 ANKRD45Q5TZF3 282 aa14.22□□□□□ -0.13
TREM1-201ENST00000244709 PDZRN3Q9UPQ7 1066 aa14.22□□□□□ -0.13
TREM1-201ENST00000244709 SMARCA5O60264 1052 aaPredicted RBP14.21□□□□□ -0.13
TREM1-201ENST00000244709 CIAO1O76071 339 aa14.21□□□□□ -0.13
TREM1-201ENST00000244709 SRGNP10124 158 aa14.21□□□□□ -0.13
TREM1-201ENST00000244709 NUCB1Q02818 461 aa14.21□□□□□ -0.13
TREM1-201ENST00000244709 GRAPQ13588 217 aa14.21□□□□□ -0.13
TREM1-201ENST00000244709 LDHAL6AQ6ZMR3 332 aa14.21□□□□□ -0.13
TREM1-201ENST00000244709 ATG9AQ7Z3C6 839 aa14.21□□□□□ -0.13
TREM1-201ENST00000244709 C2CD5Q86YS7 1000 aa14.21□□□□□ -0.13
TREM1-201ENST00000244709 ANKRD18AQ8IVF6 992 aa14.21□□□□□ -0.13
TREM1-201ENST00000244709 GRAPLQ8TC17 118 aaPredicted RBP14.21□□□□□ -0.13
TREM1-201ENST00000244709 RBM17Q96I25 401 aaKnown RBP14.21□□□□□ -0.13
TREM1-201ENST00000244709 SASH1O94885 1247 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 HOXA10P31260 410 aaPredicted RBP14.2□□□□□ -0.14
TREM1-201ENST00000244709 IL15P40933 162 aaPredicted RBP14.2□□□□□ -0.14
TREM1-201ENST00000244709 SKAP1Q86WV1 359 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 ERC1Q8IUD2 1116 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 RHPN1Q8TCX5 695 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 MPHOSPH8Q99549 860 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 LRRCC1Q9C099 1032 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 CNNM1Q9NRU3 951 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 FBXO3Q9UK99 471 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 NPR1P16066 1061 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 CHRNA5P30532 468 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 RPS8P62241 208 aaKnown RBP14.2□□□□□ -0.14
TREM1-201ENST00000244709 KIF1BPQ96EK5 621 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 MASTLQ96GX5 879 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 LNPKQ9C0E8 428 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 BCL11AQ9H165 835 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 SPON1Q9HCB6 807 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 RIPOR2Q9Y4F9 1068 aa14.2□□□□□ -0.14
TREM1-201ENST00000244709 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.2□□□□□ -0.14
TREM1-201ENST00000244709 H0YIN7 160 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms