RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 ZNF652Q9Y2D9 606 aa15.95■□□□□ 0.14
HIF3A-201ENST00000244302 TFCP2Q12800 502 aa15.94■□□□□ 0.14
HIF3A-201ENST00000244302 ATG9AQ7Z3C6 839 aa15.94■□□□□ 0.14
HIF3A-201ENST00000244302 EAF2Q96CJ1 260 aaPredicted RBP15.94■□□□□ 0.14
HIF3A-201ENST00000244302 SETDB2Q96T68 719 aa15.94■□□□□ 0.14
HIF3A-201ENST00000244302 PLA2G12BQ9BX93 195 aa15.94■□□□□ 0.14
HIF3A-201ENST00000244302 SALL3Q9BXA9 1300 aa15.94■□□□□ 0.14
HIF3A-201ENST00000244302 CTSWP56202 376 aa15.94■□□□□ 0.14
HIF3A-201ENST00000244302 KIF1BPQ96EK5 621 aa15.94■□□□□ 0.14
HIF3A-201ENST00000244302 CDHR2Q9BYE9 1310 aa15.94■□□□□ 0.14
HIF3A-201ENST00000244302 ANKRD36CQ5JPF3 1778 aa15.93■□□□□ 0.14
HIF3A-201ENST00000244302 PDE8AO60658 829 aa15.93■□□□□ 0.14
HIF3A-201ENST00000244302 RAB11FIP3O75154 756 aa15.93■□□□□ 0.14
HIF3A-201ENST00000244302 ITGA6P23229 1130 aa15.93■□□□□ 0.14
HIF3A-201ENST00000244302 PDE1AP54750 535 aa15.93■□□□□ 0.14
HIF3A-201ENST00000244302 PARP10Q53GL7 1025 aa15.93■□□□□ 0.14
HIF3A-201ENST00000244302 SLC51AQ86UW1 340 aa15.93■□□□□ 0.14
HIF3A-201ENST00000244302 MAP4K4O95819 1239 aaPredicted RBP15.92■□□□□ 0.14
HIF3A-201ENST00000244302 ABCC12Q96J65 1359 aa15.92■□□□□ 0.14
HIF3A-201ENST00000244302 TNS1Q9HBL0 1735 aaKnown RBP15.92■□□□□ 0.14
HIF3A-201ENST00000244302 UBR3Q6ZT12 1888 aa15.92■□□□□ 0.14
HIF3A-201ENST00000244302 CCDC57Q2TAC2 916 aa15.92■□□□□ 0.14
HIF3A-201ENST00000244302 COL4A1P02462 1669 aa15.91■□□□□ 0.14
HIF3A-201ENST00000244302 DEKP35659 375 aaKnown RBP15.91■□□□□ 0.14
HIF3A-201ENST00000244302 MSL1Q68DK7 614 aa15.91■□□□□ 0.14
HIF3A-201ENST00000244302 BCORQ6W2J9 1755 aa15.91■□□□□ 0.14
HIF3A-201ENST00000244302 NBPF5PQ86XG9 351 aaPredicted RBP15.91■□□□□ 0.14
HIF3A-201ENST00000244302 C4AP0C0L4 1744 aa15.91■□□□□ 0.14
HIF3A-201ENST00000244302 SNAP23O00161 211 aa15.91■□□□□ 0.14
HIF3A-201ENST00000244302 SSFA2P28290 1259 aa15.91■□□□□ 0.14
HIF3A-201ENST00000244302 GTF2E1P29083 439 aaPredicted RBP15.91■□□□□ 0.14
HIF3A-201ENST00000244302 TIMM10P62072 90 aa15.91■□□□□ 0.14
HIF3A-201ENST00000244302 IFIT5Q13325 482 aaKnown RBP15.91■□□□□ 0.14
HIF3A-201ENST00000244302 AACSQ86V21 672 aa15.91■□□□□ 0.14
HIF3A-201ENST00000244302 MX1P20591 662 aa15.9■□□□□ 0.14
HIF3A-201ENST00000244302 UTRNP46939 3433 aa15.9■□□□□ 0.14
HIF3A-201ENST00000244302 PNPLA7Q6ZV29 1317 aa15.89■□□□□ 0.14
HIF3A-201ENST00000244302 WTIPA6NIX2 430 aaPredicted RBP15.89■□□□□ 0.13
HIF3A-201ENST00000244302 DDR1Q08345 913 aa15.89■□□□□ 0.13
HIF3A-201ENST00000244302 TTC22Q5TAA0 569 aa15.89■□□□□ 0.13
HIF3A-201ENST00000244302 EYA2O00167 538 aa15.89■□□□□ 0.13
HIF3A-201ENST00000244302 HELBQ8NG08 1087 aaPredicted RBP15.89■□□□□ 0.13
HIF3A-201ENST00000244302 NDUFB9Q9Y6M9 179 aa15.89■□□□□ 0.13
HIF3A-201ENST00000244302 ADRA2BP18089 450 aa15.88■□□□□ 0.13
HIF3A-201ENST00000244302 TM4SF1P30408 202 aa15.88■□□□□ 0.13
HIF3A-201ENST00000244302 HSP90AB4PQ58FF6 505 aa15.88■□□□□ 0.13
HIF3A-201ENST00000244302 CLASRPQ8N2M8 674 aaKnown RBP15.88■□□□□ 0.13
HIF3A-201ENST00000244302 SDSP20132 328 aa15.88■□□□□ 0.13
HIF3A-201ENST00000244302 TAF7LQ5H9L4 462 aa15.88■□□□□ 0.13
HIF3A-201ENST00000244302 SCN7AQ01118 1682 aa15.88■□□□□ 0.13
HIF3A-201ENST00000244302 TAF1P21675 1872 aa15.87■□□□□ 0.13
HIF3A-201ENST00000244302 ANKRD18BA2A2Z9 1011 aa15.87■□□□□ 0.13
HIF3A-201ENST00000244302 LDHAL6AQ6ZMR3 332 aa15.87■□□□□ 0.13
HIF3A-201ENST00000244302 PI4K2BQ8TCG2 481 aa15.87■□□□□ 0.13
HIF3A-201ENST00000244302 TNNI3KQ59H18 835 aa15.86■□□□□ 0.13
HIF3A-201ENST00000244302 BMP2KLQ5H9B9 411 aa15.86■□□□□ 0.13
HIF3A-201ENST00000244302 TPTE2Q6XPS3 522 aa15.86■□□□□ 0.13
HIF3A-201ENST00000244302 DBNDD2Q9BQY9 259 aa15.86■□□□□ 0.13
HIF3A-201ENST00000244302 DBNLQ9UJU6 430 aaKnown RBP15.86■□□□□ 0.13
HIF3A-201ENST00000244302 RIPOR2Q9Y4F9 1068 aa15.86■□□□□ 0.13
HIF3A-201ENST00000244302 FPGT-TNNI3KV9GXZ4 949 aa15.86■□□□□ 0.13
HIF3A-201ENST00000244302 IFIT2P09913 472 aaKnown RBP15.86■□□□□ 0.13
HIF3A-201ENST00000244302 SLC15A2Q16348 729 aa15.86■□□□□ 0.13
HIF3A-201ENST00000244302 PRR5LQ6MZQ0 368 aa15.86■□□□□ 0.13
HIF3A-201ENST00000244302 ERC1Q8IUD2 1116 aa15.86■□□□□ 0.13
HIF3A-201ENST00000244302 OSBPL3Q9H4L5 887 aa15.86■□□□□ 0.13
HIF3A-201ENST00000244302 STAP2Q9UGK3 403 aa15.86■□□□□ 0.13
HIF3A-201ENST00000244302 DDX60Q8IY21 1712 aaKnown RBP15.85■□□□□ 0.13
HIF3A-201ENST00000244302 NPHP1O15259 732 aa15.85■□□□□ 0.13
HIF3A-201ENST00000244302 TAF5LO75529 589 aa15.85■□□□□ 0.13
HIF3A-201ENST00000244302 SERPINB2P05120 415 aa15.85■□□□□ 0.13
HIF3A-201ENST00000244302 NBR1Q14596 966 aa15.85■□□□□ 0.13
HIF3A-201ENST00000244302 SLC10A5Q5PT55 438 aa15.85■□□□□ 0.13
HIF3A-201ENST00000244302 CELF1Q92879 486 aaKnown RBP15.85■□□□□ 0.13
HIF3A-201ENST00000244302 DDRGK1Q96HY6 314 aa15.85■□□□□ 0.13
HIF3A-201ENST00000244302 NEUROD6Q96NK8 337 aa15.85■□□□□ 0.13
HIF3A-201ENST00000244302 ADORA1P30542 326 aa15.85■□□□□ 0.13
HIF3A-201ENST00000244302 SF3B2Q13435 895 aaKnown RBP15.85■□□□□ 0.13
HIF3A-201ENST00000244302 EDC3Q96F86 508 aaKnown RBP15.85■□□□□ 0.13
HIF3A-201ENST00000244302 CNNM1Q9NRU3 951 aa15.85■□□□□ 0.13
HIF3A-201ENST00000244302 CARMIL3Q8ND23 1372 aa15.85■□□□□ 0.13
HIF3A-201ENST00000244302 POLRMTO00411 1230 aaKnown RBP15.84■□□□□ 0.13
HIF3A-201ENST00000244302 IL15P40933 162 aaPredicted RBP15.84■□□□□ 0.13
HIF3A-201ENST00000244302 TUBGCP6Q96RT7 1819 aa15.84■□□□□ 0.13
HIF3A-201ENST00000244302 CCDC152Q4G0S7 254 aa15.83■□□□□ 0.13
HIF3A-201ENST00000244302 TBC1D9Q6ZT07 1266 aa15.83■□□□□ 0.13
HIF3A-201ENST00000244302 RILPL2Q969X0 211 aa15.83■□□□□ 0.13
HIF3A-201ENST00000244302 BOLA2Q9H3K6 86 aa15.83■□□□□ 0.13
HIF3A-201ENST00000244302 TRIM6-TRIM34B2RNG4 842 aa15.83■□□□□ 0.12
HIF3A-201ENST00000244302 BAG6P46379 1132 aa15.83■□□□□ 0.12
HIF3A-201ENST00000244302 CNBD1Q8NA66 436 aa15.83■□□□□ 0.12
HIF3A-201ENST00000244302 NYXQ9GZU5 481 aa15.83■□□□□ 0.12
HIF3A-201ENST00000244302 SF3B3Q15393 1217 aaKnown RBP15.82■□□□□ 0.12
HIF3A-201ENST00000244302 METTL24Q5JXM2 366 aa15.82■□□□□ 0.12
HIF3A-201ENST00000244302 NLRP3Q96P20 1036 aa15.82■□□□□ 0.12
HIF3A-201ENST00000244302 CEP126Q9P2H0 1117 aa15.82■□□□□ 0.12
HIF3A-201ENST00000244302 MYH3P11055 1940 aa15.82■□□□□ 0.12
HIF3A-201ENST00000244302 A0A1B0GUL7 405 aa15.82■□□□□ 0.12
HIF3A-201ENST00000244302 RGL2O15211 777 aa15.82■□□□□ 0.12
HIF3A-201ENST00000244302 CIAO1O76071 339 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms