RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 PPP1R9BQ96SB3 815 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 CCDC175P0C221 793 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 PAFAH1B1P43034 410 aa8.63□□□□□ -1.03
RIF1-201ENST00000243326 UTP14AQ9BVJ6 771 aaKnown RBP8.63□□□□□ -1.03
RIF1-201ENST00000243326 CEP63Q96MT8 703 aa8.62□□□□□ -1.03
RIF1-201ENST00000243326 BCL2L12Q9HB09 334 aa8.62□□□□□ -1.03
RIF1-201ENST00000243326 KIF2AO00139 706 aaPredicted RBP8.62□□□□□ -1.03
RIF1-201ENST00000243326 METAP2P50579 478 aaKnown RBP eCLIP8.62□□□□□ -1.03
RIF1-201ENST00000243326 LARP1Q6PKG0 1096 aaKnown RBP8.62□□□□□ -1.03
RIF1-201ENST00000243326 WWC3Q9ULE0 1092 aa8.62□□□□□ -1.03
RIF1-201ENST00000243326 PAXBP1Q9Y5B6 917 aa8.62□□□□□ -1.03
RIF1-201ENST00000243326 PRXQ9BXM0 1461 aa8.62□□□□□ -1.03
RIF1-201ENST00000243326 RTL1A6NKG5 1358 aa8.62□□□□□ -1.03
RIF1-201ENST00000243326 ARHGEF11O15085 1522 aa8.62□□□□□ -1.03
RIF1-201ENST00000243326 LRMPQ12912 555 aa8.62□□□□□ -1.03
RIF1-201ENST00000243326 LUC7LQ9NQ29 371 aaKnown RBP8.62□□□□□ -1.03
RIF1-201ENST00000243326 BMP2KLQ5H9B9 411 aa8.62□□□□□ -1.03
RIF1-201ENST00000243326 GAS2L3Q86XJ1 694 aa8.62□□□□□ -1.03
RIF1-201ENST00000243326 PYCARDQ9ULZ3 195 aa8.62□□□□□ -1.03
RIF1-201ENST00000243326 SEC31AO94979 1220 aaKnown RBP8.62□□□□□ -1.03
RIF1-201ENST00000243326 SH2B1Q9NRF2 756 aaPredicted RBP8.62□□□□□ -1.03
RIF1-201ENST00000243326 NCAPD3P42695 1498 aa8.62□□□□□ -1.03
RIF1-201ENST00000243326 FCHSD2O94868 740 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 KIF4AO95239 1232 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 NCOA5Q9HCD5 579 aaKnown RBP8.61□□□□□ -1.03
RIF1-201ENST00000243326 ZNF213O14771 459 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 GTPBP4Q9BZE4 634 aaKnown RBP8.61□□□□□ -1.03
RIF1-201ENST00000243326 SMC1AQ14683 1233 aaKnown RBP8.61□□□□□ -1.03
RIF1-201ENST00000243326 GOLGA1Q92805 767 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 ALG1Q9BT22 464 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 SLC39A6Q13433 755 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 CCDC150Q8NCX0 1101 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 CCDC114Q96M63 670 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 CTNND2Q9UQB3 1225 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 SMAP1Q8IYB5 467 aaPredicted RBP8.61□□□□□ -1.03
RIF1-201ENST00000243326 PI4KAP2A4QPH2 592 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 MSL1Q68DK7 614 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 UBE3BQ7Z3V4 1068 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 PI4KAP1Q8N8J0 262 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 INCENPQ9NQS7 918 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 HECW1Q76N89 1606 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 MCM5P33992 734 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 G2E3Q7L622 706 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
RIF1-201ENST00000243326 PPP2R3AQ06190 1150 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 TMEM63CQ9P1W3 806 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 ARID4AP29374 1257 aaPredicted RBP8.61□□□□□ -1.03
RIF1-201ENST00000243326 U3KPZ7 1027 aaPredicted RBP8.61□□□□□ -1.03
RIF1-201ENST00000243326 OAS2P29728 719 aaKnown RBP8.61□□□□□ -1.03
RIF1-201ENST00000243326 OTUD6BQ8N6M0 293 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 ANKRD65E5RJM6 399 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 RHPN1Q8TCX5 695 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 OGFRQ9NZT2 677 aa8.61□□□□□ -1.03
RIF1-201ENST00000243326 UVSSAQ2YD98 709 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 TSG101Q99816 390 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 FAM200AQ8TCP9 573 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 KRT13P13646 458 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 UBLCP1Q8WVY7 318 aaPredicted RBP8.6□□□□□ -1.03
RIF1-201ENST00000243326 TRIM31Q9BZY9 425 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 PROSER2Q86WR7 435 aaPredicted RBP8.6□□□□□ -1.03
RIF1-201ENST00000243326 NBPF11Q86T75 865 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 MKNK2Q9HBH9 465 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 GSDMDP57764 484 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 PLEKHM2Q8IWE5 1019 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 STAMQ92783 540 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 CBX8Q9HC52 389 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 CTAGE15A4D2H0 777 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 CTAGE8P0CG41 777 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 CTAGE6Q86UF2 777 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 CTAGE4Q8IX94 777 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 MRPS27Q92552 414 aaKnown RBP8.6□□□□□ -1.03
RIF1-201ENST00000243326 MYL10Q9BUA6 226 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 CTNNA3Q9UI47 895 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 ZPR1O75312 459 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 NEK1Q96PY6 1258 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 USP26Q9BXU7 913 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 VPS16Q9H269 839 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 KLHDC4Q8TBB5 520 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 PRC1O43663 620 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 MXRA7P84157 204 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 NRBP1Q9UHY1 535 aa8.6□□□□□ -1.03
RIF1-201ENST00000243326 ECHDC1Q9NTX5 307 aa8.59□□□□□ -1.03
RIF1-201ENST00000243326 IARSP41252 1262 aaKnown RBP8.59□□□□□ -1.03
RIF1-201ENST00000243326 HEATR3Q7Z4Q2 680 aa8.59□□□□□ -1.03
RIF1-201ENST00000243326 TRMT44Q8IYL2 757 aaKnown RBP8.59□□□□□ -1.03
RIF1-201ENST00000243326 CAMSAP2Q08AD1 1489 aa8.59□□□□□ -1.03
RIF1-201ENST00000243326 RASSF4Q9H2L5 321 aa8.59□□□□□ -1.03
RIF1-201ENST00000243326 KCNK9Q9NPC2 374 aa8.59□□□□□ -1.03
RIF1-201ENST00000243326 MSH6P52701 1360 aa8.59□□□□□ -1.03
RIF1-201ENST00000243326 CTAGE9A4FU28 777 aa8.59□□□□□ -1.03
RIF1-201ENST00000243326 CCDC91Q7Z6B0 441 aa8.59□□□□□ -1.03
RIF1-201ENST00000243326 TACO1Q9BSH4 297 aaKnown RBP8.59□□□□□ -1.03
RIF1-201ENST00000243326 DESI2Q9BSY9 194 aa8.59□□□□□ -1.03
RIF1-201ENST00000243326 CEP112Q8N8E3 955 aa8.59□□□□□ -1.03
RIF1-201ENST00000243326 LMBRD1Q9NUN5 540 aa8.59□□□□□ -1.03
RIF1-201ENST00000243326 A0A087WZG4 1122 aa8.59□□□□□ -1.03
RIF1-201ENST00000243326 CLNS1AP54105 237 aaKnown RBP8.59□□□□□ -1.03
RIF1-201ENST00000243326 CCDC6Q16204 474 aa8.59□□□□□ -1.03
RIF1-201ENST00000243326 CEP131Q9UPN4 1083 aa8.59□□□□□ -1.03
RIF1-201ENST00000243326 hCG_1642624A0A1W2PR95 340 aa8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms