RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 RBM8AQ9Y5S9 174 aaKnown RBP18.56■□□□□ 0.56
CTSD-201ENST00000236671 GRM8O00222 908 aa18.56■□□□□ 0.56
CTSD-201ENST00000236671 DNM1Q05193 864 aaKnown RBP18.56■□□□□ 0.56
CTSD-201ENST00000236671 KIAA2012Q0VF49 1180 aa18.56■□□□□ 0.56
CTSD-201ENST00000236671 CREB3L3Q68CJ9 461 aa18.56■□□□□ 0.56
CTSD-201ENST00000236671 LINS1Q8NG48 757 aa18.56■□□□□ 0.56
CTSD-201ENST00000236671 FUCA2Q9BTY2 467 aa18.56■□□□□ 0.56
CTSD-201ENST00000236671 SNRKQ9NRH2 765 aa18.56■□□□□ 0.56
CTSD-201ENST00000236671 UQCRHLA0A096LP55 91 aa18.55■□□□□ 0.56
CTSD-201ENST00000236671 DTNBO60941 627 aa18.55■□□□□ 0.56
CTSD-201ENST00000236671 UQCRHP07919 91 aa18.55■□□□□ 0.56
CTSD-201ENST00000236671 RXRBP28702 533 aa18.55■□□□□ 0.56
CTSD-201ENST00000236671 NMIQ13287 307 aaPredicted RBP18.55■□□□□ 0.56
CTSD-201ENST00000236671 KLHL34Q8N239 644 aa18.55■□□□□ 0.56
CTSD-201ENST00000236671 EAF2Q96CJ1 260 aaPredicted RBP18.55■□□□□ 0.56
CTSD-201ENST00000236671 FAM227BQ96M60 508 aa18.55■□□□□ 0.56
CTSD-201ENST00000236671 ZKSCAN1P17029 563 aaPredicted RBP18.55■□□□□ 0.56
CTSD-201ENST00000236671 TPRNQ4KMQ1 711 aa18.55■□□□□ 0.56
CTSD-201ENST00000236671 MAP4K1Q92918 833 aa18.55■□□□□ 0.56
CTSD-201ENST00000236671 BICC1Q9H694 974 aaKnown RBP18.55■□□□□ 0.56
CTSD-201ENST00000236671 ADAMTS7Q9UKP4 1686 aa18.54■□□□□ 0.56
CTSD-201ENST00000236671 SHANK3Q9BYB0 1731 aa18.54■□□□□ 0.56
CTSD-201ENST00000236671 ADCY5O95622 1261 aa18.54■□□□□ 0.56
CTSD-201ENST00000236671 RBM6P78332 1123 aaKnown RBP18.54■□□□□ 0.56
CTSD-201ENST00000236671 DDX54Q8TDD1 881 aaKnown RBP18.54■□□□□ 0.56
CTSD-201ENST00000236671 TPCN1Q9ULQ1 816 aa18.54■□□□□ 0.56
CTSD-201ENST00000236671 HIP1O00291 1037 aa18.53■□□□□ 0.56
CTSD-201ENST00000236671 SEPT12Q8IYM1 358 aa18.53■□□□□ 0.56
CTSD-201ENST00000236671 TLR7Q9NYK1 1049 aaKnown RBP18.53■□□□□ 0.56
CTSD-201ENST00000236671 THSD7AQ9UPZ6 1657 aa18.53■□□□□ 0.56
CTSD-201ENST00000236671 SASS6Q6UVJ0 657 aa18.53■□□□□ 0.56
CTSD-201ENST00000236671 NECAB1Q8N987 351 aa18.53■□□□□ 0.56
CTSD-201ENST00000236671 DISP2A7MBM2 1401 aa18.53■□□□□ 0.56
CTSD-201ENST00000236671 SLC27A2O14975 620 aa18.52■□□□□ 0.56
CTSD-201ENST00000236671 IL2RBP14784 551 aa18.52■□□□□ 0.56
CTSD-201ENST00000236671 COL9A3Q14050 684 aaPredicted RBP18.52■□□□□ 0.56
CTSD-201ENST00000236671 PDIA6Q15084 440 aa18.52■□□□□ 0.56
CTSD-201ENST00000236671 GIMAP6Q6P9H5 292 aa18.52■□□□□ 0.56
CTSD-201ENST00000236671 CCDC8Q9H0W5 538 aaPredicted RBP18.52■□□□□ 0.56
CTSD-201ENST00000236671 DDX21Q9NR30 783 aaKnown RBP eCLIP18.52■□□□□ 0.56
CTSD-201ENST00000236671 MRC1P22897 1456 aa18.52■□□□□ 0.56
CTSD-201ENST00000236671 A0A0D9SFI3 127 aa18.52■□□□□ 0.55
CTSD-201ENST00000236671 VPS37CA5D8V6 355 aaPredicted RBP18.52■□□□□ 0.55
CTSD-201ENST00000236671 G3BP1Q13283 466 aaKnown RBP eCLIP18.52■□□□□ 0.55
CTSD-201ENST00000236671 MED23Q9ULK4 1368 aa18.52■□□□□ 0.55
CTSD-201ENST00000236671 DDX58O95786 925 aaKnown RBP18.51■□□□□ 0.55
CTSD-201ENST00000236671 RBM10P98175 930 aaKnown RBP18.51■□□□□ 0.55
CTSD-201ENST00000236671 KDM4AO75164 1064 aa18.5■□□□□ 0.55
CTSD-201ENST00000236671 KCNJ4P48050 445 aa18.5■□□□□ 0.55
CTSD-201ENST00000236671 ILDR2Q71H61 639 aa18.5■□□□□ 0.55
CTSD-201ENST00000236671 MPNDQ8N594 471 aa18.5■□□□□ 0.55
CTSD-201ENST00000236671 PIBF1Q8WXW3 757 aa18.5■□□□□ 0.55
CTSD-201ENST00000236671 IGKV5-2P06315 115 aa18.5■□□□□ 0.55
CTSD-201ENST00000236671 PSMA5P28066 241 aa18.5■□□□□ 0.55
CTSD-201ENST00000236671 RAPGEF4Q8WZA2 1011 aa18.5■□□□□ 0.55
CTSD-201ENST00000236671 ZNF830Q96NB3 372 aaPredicted RBP18.5■□□□□ 0.55
CTSD-201ENST00000236671 PARP4Q9UKK3 1724 aaKnown RBP18.5■□□□□ 0.55
CTSD-201ENST00000236671 DYNC1I1O14576 645 aa18.49■□□□□ 0.55
CTSD-201ENST00000236671 AIMP1Q12904 312 aaKnown RBP18.49■□□□□ 0.55
CTSD-201ENST00000236671 BARGINQ6ZT62 677 aa18.49■□□□□ 0.55
CTSD-201ENST00000236671 CDC37L1Q7L3B6 337 aa18.49■□□□□ 0.55
CTSD-201ENST00000236671 FSD1Q9BTV5 496 aa18.49■□□□□ 0.55
CTSD-201ENST00000236671 BOLA2Q9H3K6 86 aa18.49■□□□□ 0.55
CTSD-201ENST00000236671 TAF6LQ9Y6J9 622 aa18.49■□□□□ 0.55
CTSD-201ENST00000236671 C5P01031 1676 aa18.48■□□□□ 0.55
CTSD-201ENST00000236671 LARP1BQ659C4 914 aaKnown RBP18.48■□□□□ 0.55
CTSD-201ENST00000236671 SIL1Q9H173 461 aa18.48■□□□□ 0.55
CTSD-201ENST00000236671 PDIA4P13667 645 aaKnown RBP18.47■□□□□ 0.55
CTSD-201ENST00000236671 TTC6Q86TZ1 520 aa18.47■□□□□ 0.55
CTSD-201ENST00000236671 ALDH8A1Q9H2A2 487 aaPredicted RBP18.47■□□□□ 0.55
CTSD-201ENST00000236671 TTC12Q9H892 705 aaPredicted RBP18.47■□□□□ 0.55
CTSD-201ENST00000236671 FAM13BQ9NYF5 915 aa18.47■□□□□ 0.55
CTSD-201ENST00000236671 THRAP3Q9Y2W1 955 aaKnown RBP18.47■□□□□ 0.55
CTSD-201ENST00000236671 AP5Z1O43299 807 aa18.47■□□□□ 0.55
CTSD-201ENST00000236671 ONECUT3O60422 494 aaPredicted RBP18.47■□□□□ 0.55
CTSD-201ENST00000236671 RPS6KB1P23443 525 aa18.47■□□□□ 0.55
CTSD-201ENST00000236671 DDB1Q16531 1140 aa18.47■□□□□ 0.55
CTSD-201ENST00000236671 RNF20Q5VTR2 975 aa18.47■□□□□ 0.55
CTSD-201ENST00000236671 BLOC1S2Q6QNY1 142 aa18.47■□□□□ 0.55
CTSD-201ENST00000236671 ELP1O95163 1332 aa18.46■□□□□ 0.55
CTSD-201ENST00000236671 NEURL1BA8MQ27 555 aa18.46■□□□□ 0.55
CTSD-201ENST00000236671 TATP17735 454 aaPredicted RBP18.46■□□□□ 0.55
CTSD-201ENST00000236671 KRT85P78386 507 aa18.46■□□□□ 0.55
CTSD-201ENST00000236671 TOB2Q14106 344 aaPredicted RBP18.46■□□□□ 0.55
CTSD-201ENST00000236671 ANKRD1Q15327 319 aa18.46■□□□□ 0.55
CTSD-201ENST00000236671 PKD1L3Q7Z443 1732 aa18.46■□□□□ 0.55
CTSD-201ENST00000236671 ZNF589Q86UQ0 364 aaPredicted RBP18.46■□□□□ 0.55
CTSD-201ENST00000236671 KLHDC4Q8TBB5 520 aa18.46■□□□□ 0.55
CTSD-201ENST00000236671 CYP27B1O15528 508 aa18.46■□□□□ 0.55
CTSD-201ENST00000236671 PDCP20941 246 aa18.46■□□□□ 0.55
CTSD-201ENST00000236671 NOLC1Q14978 699 aaKnown RBP eCLIP18.46■□□□□ 0.551e-8■□□□□ 8.1
CTSD-201ENST00000236671 RIC3Q7Z5B4 369 aa18.46■□□□□ 0.55
CTSD-201ENST00000236671 MARCH10Q8NA82 808 aaPredicted RBP18.46■□□□□ 0.55
CTSD-201ENST00000236671 TCEANC2Q96MN5 208 aa18.46■□□□□ 0.55
CTSD-201ENST00000236671 MAP7D2Q96T17 732 aa18.46■□□□□ 0.55
CTSD-201ENST00000236671 EPHA10Q5JZY3 1008 aa18.45■□□□□ 0.54
CTSD-201ENST00000236671 FERMT3Q86UX7 667 aa18.45■□□□□ 0.54
CTSD-201ENST00000236671 GCKRQ14397 625 aa18.44■□□□□ 0.54
CTSD-201ENST00000236671 TSGA10IPQ3SY00 556 aa18.44■□□□□ 0.54
CTSD-201ENST00000236671 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms