RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 PLA2G12BQ9BX93 195 aa19.35■□□□□ 0.69
ITGA4-201ENST00000233573 SNRKQ9NRH2 765 aa19.35■□□□□ 0.69
ITGA4-201ENST00000233573 FOXD4L1Q9NU39 408 aa19.35■□□□□ 0.69
ITGA4-201ENST00000233573 ATP5JP18859 108 aa19.34■□□□□ 0.69
ITGA4-201ENST00000233573 MCM4P33991 863 aa19.34■□□□□ 0.69
ITGA4-201ENST00000233573 NEK4P51957 841 aa19.34■□□□□ 0.69
ITGA4-201ENST00000233573 SMIM5Q71RC9 77 aa19.34■□□□□ 0.69
ITGA4-201ENST00000233573 SYNE4Q8N205 404 aa19.34■□□□□ 0.69
ITGA4-201ENST00000233573 RUFY2Q8WXA3 655 aa19.34■□□□□ 0.69
ITGA4-201ENST00000233573 FAM89AQ96GI7 184 aa19.34■□□□□ 0.69
ITGA4-201ENST00000233573 BOLA2Q9H3K6 86 aa19.34■□□□□ 0.69
ITGA4-201ENST00000233573 CHMP3Q9Y3E7 222 aa19.34■□□□□ 0.69
ITGA4-201ENST00000233573 NLRP10Q86W26 655 aa19.33■□□□□ 0.69
ITGA4-201ENST00000233573 GPR108Q9NPR9 543 aa19.33■□□□□ 0.69
ITGA4-201ENST00000233573 ZBTB38Q8NAP3 1195 aaPredicted RBP19.32■□□□□ 0.68
ITGA4-201ENST00000233573 UBN2Q6ZU65 1347 aa19.32■□□□□ 0.68
ITGA4-201ENST00000233573 HIP1O00291 1037 aa19.32■□□□□ 0.68
ITGA4-201ENST00000233573 CIAO1O76071 339 aa19.32■□□□□ 0.68
ITGA4-201ENST00000233573 IL27Q8NEV9 243 aa19.32■□□□□ 0.68
ITGA4-201ENST00000233573 TNPO1Q92973 898 aaKnown RBP19.32■□□□□ 0.68
ITGA4-201ENST00000233573 DBNDD2Q9BQY9 259 aa19.32■□□□□ 0.68
ITGA4-201ENST00000233573 CDHR2Q9BYE9 1310 aa19.32■□□□□ 0.68
ITGA4-201ENST00000233573 ERVV-1B6SEH8 477 aa19.31■□□□□ 0.68
ITGA4-201ENST00000233573 EYA2O00167 538 aa19.31■□□□□ 0.68
ITGA4-201ENST00000233573 IL15P40933 162 aaPredicted RBP19.31■□□□□ 0.68
ITGA4-201ENST00000233573 MCM2P49736 904 aa19.31■□□□□ 0.68
ITGA4-201ENST00000233573 SNX14Q9Y5W7 946 aa19.31■□□□□ 0.68
ITGA4-201ENST00000233573 CAMTA2O94983 1202 aa19.31■□□□□ 0.68
ITGA4-201ENST00000233573 CSF1RP07333 972 aa19.31■□□□□ 0.68
ITGA4-201ENST00000233573 PTH1RQ03431 593 aa19.31■□□□□ 0.68
ITGA4-201ENST00000233573 GSE1Q14687 1217 aa19.31■□□□□ 0.68
ITGA4-201ENST00000233573 HSP90AB3PQ58FF7 597 aa19.31■□□□□ 0.68
ITGA4-201ENST00000233573 KIAA1211Q6ZU35 1233 aa19.31■□□□□ 0.68
ITGA4-201ENST00000233573 KCNB2Q92953 911 aa19.31■□□□□ 0.68
ITGA4-201ENST00000233573 LY75O60449 1722 aa19.3■□□□□ 0.68
ITGA4-201ENST00000233573 NMIQ13287 307 aaPredicted RBP19.3■□□□□ 0.68
ITGA4-201ENST00000233573 LRRC24Q50LG9 513 aa19.3■□□□□ 0.68
ITGA4-201ENST00000233573 ZNF594Q96JF6 807 aaPredicted RBP19.3■□□□□ 0.68
ITGA4-201ENST00000233573 FAM227BQ96M60 508 aa19.3■□□□□ 0.68
ITGA4-201ENST00000233573 CCNL1Q9UK58 526 aaPredicted RBP19.3■□□□□ 0.68
ITGA4-201ENST00000233573 ZNF609O15014 1411 aa19.3■□□□□ 0.68
ITGA4-201ENST00000233573 KRT27Q7Z3Y8 459 aa19.29■□□□□ 0.68
ITGA4-201ENST00000233573 RASEFQ8IZ41 740 aa19.29■□□□□ 0.68
ITGA4-201ENST00000233573 CCDC85AQ96PX6 553 aaPredicted RBP19.29■□□□□ 0.68
ITGA4-201ENST00000233573 TMX3Q96JJ7 454 aa19.29■□□□□ 0.68
ITGA4-201ENST00000233573 RFX7Q2KHR2 1363 aa19.29■□□□□ 0.68
ITGA4-201ENST00000233573 MED23Q9ULK4 1368 aa19.29■□□□□ 0.68
ITGA4-201ENST00000233573 MYH3P11055 1940 aa19.28■□□□□ 0.68
ITGA4-201ENST00000233573 A0A0D9SFI3 127 aa19.28■□□□□ 0.68
ITGA4-201ENST00000233573 ZNF34Q8IZ26 560 aa19.28■□□□□ 0.68
ITGA4-201ENST00000233573 HAUS7Q99871 368 aa19.28■□□□□ 0.68
ITGA4-201ENST00000233573 FSD1Q9BTV5 496 aa19.28■□□□□ 0.68
ITGA4-201ENST00000233573 PUS3Q9BZE2 481 aaKnown RBP19.28■□□□□ 0.68
ITGA4-201ENST00000233573 CWC22Q9HCG8 908 aaKnown RBP19.28■□□□□ 0.68
ITGA4-201ENST00000233573 FBXO3Q9UK99 471 aa19.28■□□□□ 0.68
ITGA4-201ENST00000233573 FAM177BA6PVY3 158 aa19.28■□□□□ 0.68
ITGA4-201ENST00000233573 CYP2E1P05181 493 aaPredicted RBP19.28■□□□□ 0.68
ITGA4-201ENST00000233573 CUL4AQ13619 759 aa19.28■□□□□ 0.68
ITGA4-201ENST00000233573 CLEC17AQ6ZS10 378 aa19.28■□□□□ 0.68
ITGA4-201ENST00000233573 ZGPATQ8N5A5 531 aaKnown RBP19.28■□□□□ 0.68
ITGA4-201ENST00000233573 EDC3Q96F86 508 aaKnown RBP19.28■□□□□ 0.68
ITGA4-201ENST00000233573 UPF3BQ9BZI7 483 aaKnown RBP19.28■□□□□ 0.68
ITGA4-201ENST00000233573 TRMT112Q9UI30 125 aaKnown RBP19.28■□□□□ 0.68
ITGA4-201ENST00000233573 CCDC171Q6TFL3 1326 aa19.28■□□□□ 0.68
ITGA4-201ENST00000233573 CNTNAP4Q9C0A0 1308 aa19.28■□□□□ 0.68
ITGA4-201ENST00000233573 TAF1LQ8IZX4 1826 aa19.27■□□□□ 0.68
ITGA4-201ENST00000233573 BCORQ6W2J9 1755 aa19.27■□□□□ 0.68
ITGA4-201ENST00000233573 NECTIN1Q15223 517 aa19.26■□□□□ 0.67
ITGA4-201ENST00000233573 AMIGO3Q86WK7 504 aa19.26■□□□□ 0.67
ITGA4-201ENST00000233573 MAP4K1Q92918 833 aa19.26■□□□□ 0.67
ITGA4-201ENST00000233573 TTC14Q96N46 770 aa19.26■□□□□ 0.67
ITGA4-201ENST00000233573 BCL11BQ9C0K0 894 aaPredicted RBP19.26■□□□□ 0.67
ITGA4-201ENST00000233573 SSFA2P28290 1259 aa19.26■□□□□ 0.67
ITGA4-201ENST00000233573 CCDC57Q2TAC2 916 aa19.26■□□□□ 0.67
ITGA4-201ENST00000233573 ZNF772Q68DY9 489 aaPredicted RBP19.26■□□□□ 0.67
ITGA4-201ENST00000233573 SUSD4Q5VX71 490 aa19.25■□□□□ 0.67
ITGA4-201ENST00000233573 GNPATO15228 680 aa19.24■□□□□ 0.67
ITGA4-201ENST00000233573 TRIM37O94972 964 aa19.24■□□□□ 0.67
ITGA4-201ENST00000233573 TIMM10P62072 90 aa19.24■□□□□ 0.67
ITGA4-201ENST00000233573 RBM6P78332 1123 aaKnown RBP19.24■□□□□ 0.67
ITGA4-201ENST00000233573 TTLL11Q8NHH1 800 aa19.24■□□□□ 0.67
ITGA4-201ENST00000233573 NDUFB9Q9Y6M9 179 aa19.24■□□□□ 0.67
ITGA4-201ENST00000233573 IRS4O14654 1257 aaPredicted RBP19.24■□□□□ 0.67
ITGA4-201ENST00000233573 FAM196AQ6ZSG2 479 aa19.24■□□□□ 0.67
ITGA4-201ENST00000233573 LRRC4BQ9NT99 713 aa19.24■□□□□ 0.67
ITGA4-201ENST00000233573 A0A1B0GUL7 405 aa19.23■□□□□ 0.67
ITGA4-201ENST00000233573 DDX11L8A8MPP1 907 aa19.23■□□□□ 0.67
ITGA4-201ENST00000233573 NUCB2P80303 420 aa19.23■□□□□ 0.67
ITGA4-201ENST00000233573 NIP7Q9Y221 180 aaKnown RBP eCLIP19.23■□□□□ 0.67
ITGA4-201ENST00000233573 SPEF2Q9C093 1822 aa19.23■□□□□ 0.67
ITGA4-201ENST00000233573 PRPF40BQ6NWY9 871 aaKnown RBP19.23■□□□□ 0.67
ITGA4-201ENST00000233573 ZNF589Q86UQ0 364 aaPredicted RBP19.23■□□□□ 0.67
ITGA4-201ENST00000233573 INTS4Q96HW7 963 aaKnown RBP19.23■□□□□ 0.67
ITGA4-201ENST00000233573 NEUROD6Q96NK8 337 aa19.23■□□□□ 0.67
ITGA4-201ENST00000233573 GBP4Q96PP9 640 aa19.23■□□□□ 0.67
ITGA4-201ENST00000233573 RBM8AQ9Y5S9 174 aaKnown RBP19.23■□□□□ 0.67
ITGA4-201ENST00000233573 C4BP0C0L5 1744 aa19.22■□□□□ 0.67
ITGA4-201ENST00000233573 CTSWP56202 376 aa19.22■□□□□ 0.67
ITGA4-201ENST00000233573 IFIT5Q13325 482 aaKnown RBP19.22■□□□□ 0.67
ITGA4-201ENST00000233573 PKP1Q13835 747 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms