RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 RFC4P35249 363 aa13.51□□□□□ -0.25
CCND1-201ENST00000227507 KCNF1Q9H3M0 494 aa13.51□□□□□ -0.25
CCND1-201ENST00000227507 BABAM1Q9NWV8 329 aa13.51□□□□□ -0.25
CCND1-201ENST00000227507 LRRFIP2Q9Y608 721 aaKnown RBP13.51□□□□□ -0.25
CCND1-201ENST00000227507 IGHMBP2P38935 993 aaKnown RBP13.51□□□□□ -0.25
CCND1-201ENST00000227507 NCBP1Q09161 790 aaKnown RBP13.51□□□□□ -0.25
CCND1-201ENST00000227507 GNL2Q13823 731 aaKnown RBP13.51□□□□□ -0.25
CCND1-201ENST00000227507 XAGE3Q8WTP9 111 aa13.5□□□□□ -0.25
CCND1-201ENST00000227507 DNAJC2Q99543 621 aaKnown RBP13.5□□□□□ -0.25
CCND1-201ENST00000227507 CCDC158Q5M9N0 1113 aa13.5□□□□□ -0.25
CCND1-201ENST00000227507 COPS6Q7L5N1 327 aa13.5□□□□□ -0.25
CCND1-201ENST00000227507 GTF3C6Q969F1 213 aa13.5□□□□□ -0.25
CCND1-201ENST00000227507 TIGD1Q96MW7 591 aa13.5□□□□□ -0.25
CCND1-201ENST00000227507 GNL3LQ9NVN8 582 aaKnown RBP13.5□□□□□ -0.25
CCND1-201ENST00000227507 FAM193AP78312 1265 aa13.5□□□□□ -0.25
CCND1-201ENST00000227507 DLC1Q96QB1 1528 aa13.5□□□□□ -0.25
CCND1-201ENST00000227507 SMTNL1A8MU46 457 aa13.5□□□□□ -0.25
CCND1-201ENST00000227507 CUL4AQ13619 759 aa13.5□□□□□ -0.25
CCND1-201ENST00000227507 FAM177A1Q8N128 213 aaPredicted RBP13.5□□□□□ -0.25
CCND1-201ENST00000227507 CARD10Q9BWT7 1032 aa13.5□□□□□ -0.25
CCND1-201ENST00000227507 CYP46A1Q9Y6A2 500 aa13.5□□□□□ -0.25
CCND1-201ENST00000227507 IQSEC2Q5JU85 1478 aa13.49□□□□□ -0.25
CCND1-201ENST00000227507 NRDCO43847 1150 aa13.49□□□□□ -0.25
CCND1-201ENST00000227507 ZNF790Q6PG37 636 aa13.49□□□□□ -0.25
CCND1-201ENST00000227507 CNTROBQ8N137 903 aa13.49□□□□□ -0.25
CCND1-201ENST00000227507 TBC1D2BQ9UPU7 963 aa13.49□□□□□ -0.25
CCND1-201ENST00000227507 ATP5J2-PTCD1G3V325 749 aa13.49□□□□□ -0.25
CCND1-201ENST00000227507 WASHC4Q2M389 1173 aa13.49□□□□□ -0.25
CCND1-201ENST00000227507 FSD1Q9BTV5 496 aa13.49□□□□□ -0.25
CCND1-201ENST00000227507 LGR6Q9HBX8 967 aa13.49□□□□□ -0.25
CCND1-201ENST00000227507 CWC25Q9NXE8 425 aaPredicted RBP13.49□□□□□ -0.25
CCND1-201ENST00000227507 SOS1Q07889 1333 aaPredicted RBP13.49□□□□□ -0.25
CCND1-201ENST00000227507 PNMA6EA0A0J9YXQ4 647 aa13.49□□□□□ -0.25
CCND1-201ENST00000227507 ELF2Q15723 593 aa13.49□□□□□ -0.25
CCND1-201ENST00000227507 TRPC5Q9UL62 973 aaPredicted RBP13.49□□□□□ -0.25
CCND1-201ENST00000227507 ERBB3P21860 1342 aa13.49□□□□□ -0.25
CCND1-201ENST00000227507 WDR17Q8IZU2 1322 aa13.49□□□□□ -0.25
CCND1-201ENST00000227507 ANAPC15P60006 121 aa13.48□□□□□ -0.25
CCND1-201ENST00000227507 CERKQ8TCT0 537 aa13.48□□□□□ -0.25
CCND1-201ENST00000227507 SPTLC3Q9NUV7 552 aa13.48□□□□□ -0.25
CCND1-201ENST00000227507 ZNF215Q9UL58 517 aaPredicted RBP13.48□□□□□ -0.25
CCND1-201ENST00000227507 AP5Z1O43299 807 aa13.48□□□□□ -0.25
CCND1-201ENST00000227507 LIG1P18858 919 aa13.48□□□□□ -0.25
CCND1-201ENST00000227507 DDX11Q96FC9 970 aa13.48□□□□□ -0.25
CCND1-201ENST00000227507 SLC52A2Q9HAB3 445 aa13.48□□□□□ -0.25
CCND1-201ENST00000227507 C1orf167Q5SNV9 1468 aa13.48□□□□□ -0.25
CCND1-201ENST00000227507 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
CCND1-201ENST00000227507 SKILP12757 684 aa13.48□□□□□ -0.25
CCND1-201ENST00000227507 CBX8Q9HC52 389 aa13.48□□□□□ -0.25
CCND1-201ENST00000227507 CDC42BPGQ6DT37 1551 aa13.47□□□□□ -0.25
CCND1-201ENST00000227507 QRICH2Q9H0J4 1663 aa13.47□□□□□ -0.25
CCND1-201ENST00000227507 PPP1R42Q7Z4L9 355 aa13.47□□□□□ -0.25
CCND1-201ENST00000227507 PAXBP1Q9Y5B6 917 aa13.47□□□□□ -0.25
CCND1-201ENST00000227507 IFIT5Q13325 482 aaKnown RBP13.47□□□□□ -0.25
CCND1-201ENST00000227507 TTC39AQ5SRH9 613 aa13.47□□□□□ -0.25
CCND1-201ENST00000227507 UBE3BQ7Z3V4 1068 aa13.47□□□□□ -0.25
CCND1-201ENST00000227507 RNF20Q5VTR2 975 aa13.47□□□□□ -0.25
CCND1-201ENST00000227507 RASEFQ8IZ41 740 aa13.47□□□□□ -0.25
CCND1-201ENST00000227507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCND1-201ENST00000227507 IGSF1Q8N6C5 1336 aa13.47□□□□□ -0.25
CCND1-201ENST00000227507 MROH1Q8NDA8 1641 aa13.46□□□□□ -0.25
CCND1-201ENST00000227507 CHL1O00533 1208 aa13.46□□□□□ -0.25
CCND1-201ENST00000227507 KSR2Q6VAB6 950 aa13.46□□□□□ -0.25
CCND1-201ENST00000227507 SMC2O95347 1197 aa13.46□□□□□ -0.25
CCND1-201ENST00000227507 KIF18AQ8NI77 898 aa13.46□□□□□ -0.25
CCND1-201ENST00000227507 ST7Q9NRC1 585 aa13.46□□□□□ -0.25
CCND1-201ENST00000227507 USP16Q9Y5T5 823 aa13.46□□□□□ -0.25
CCND1-201ENST00000227507 ZSCAN25Q6NSZ9 544 aa13.46□□□□□ -0.26
CCND1-201ENST00000227507 AACSQ86V21 672 aa13.46□□□□□ -0.26
CCND1-201ENST00000227507 MNS1Q8NEH6 495 aa13.46□□□□□ -0.26
CCND1-201ENST00000227507 SNX14Q9Y5W7 946 aa13.46□□□□□ -0.26
CCND1-201ENST00000227507 TMEM131LA2VDJ0 1609 aa13.46□□□□□ -0.26
CCND1-201ENST00000227507 TNS3Q68CZ2 1445 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 A0A087WWV3 80 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 PHKG2P15735 406 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 PIP4K2AP48426 406 aaPredicted RBP13.45□□□□□ -0.26
CCND1-201ENST00000227507 ARID5BQ14865 1188 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 RGS22Q8NE09 1264 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 RTCBQ9Y3I0 505 aaKnown RBP13.45□□□□□ -0.26
CCND1-201ENST00000227507 ERVV-2B6SEH9 535 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 RAB11FIP3O75154 756 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 HOXB7P09629 217 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 METTL24Q5JXM2 366 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 KIF1BPQ96EK5 621 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 TEX35Q5T0J7 233 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 RUFY3Q7L099 469 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 SDF4Q9BRK5 362 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 QTRT2Q9H974 415 aaKnown RBP13.45□□□□□ -0.26
CCND1-201ENST00000227507 DDX21Q9NR30 783 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCND1-201ENST00000227507 CALCOCO1Q9P1Z2 691 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 CTNNA3Q9UI47 895 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 LARGE1O95461 756 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 GABPB1Q06547 395 aaPredicted RBP13.45□□□□□ -0.26
CCND1-201ENST00000227507 TRDNQ13061 729 aa13.45□□□□□ -0.26
CCND1-201ENST00000227507 CACTINQ8WUQ7 758 aaKnown RBP13.45□□□□□ -0.26
CCND1-201ENST00000227507 RNF216Q9NWF9 866 aaPredicted RBP13.45□□□□□ -0.26
CCND1-201ENST00000227507 NRXN1Q9ULB1 1477 aa13.44□□□□□ -0.26
CCND1-201ENST00000227507 CHMP4CQ96CF2 233 aa13.44□□□□□ -0.26
CCND1-201ENST00000227507 BRPF1P55201 1214 aaPredicted RBP13.44□□□□□ -0.26
CCND1-201ENST00000227507 SKIDA1Q1XH10 827 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms