RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 NEMFO60524 1076 aa18.24■□□□□ 0.51
VTN-201ENST00000226218 SLFN14P0C7P3 912 aa18.24■□□□□ 0.51
VTN-201ENST00000226218 RNF20Q5VTR2 975 aa18.24■□□□□ 0.51
VTN-201ENST00000226218 GTF3C6Q969F1 213 aa18.24■□□□□ 0.51
VTN-201ENST00000226218 EAF2Q96CJ1 260 aaPredicted RBP18.24■□□□□ 0.51
VTN-201ENST00000226218 HMG20BQ9P0W2 317 aa18.24■□□□□ 0.51
VTN-201ENST00000226218 IGSF3O75054 1194 aa18.23■□□□□ 0.51
VTN-201ENST00000226218 BICD2Q8TD16 824 aa18.23■□□□□ 0.51
VTN-201ENST00000226218 CHMP4AQ9BY43 222 aa18.23■□□□□ 0.51
VTN-201ENST00000226218 LAMA4Q16363 1823 aa18.23■□□□□ 0.51
VTN-201ENST00000226218 KCNQ3O43525 872 aa18.23■□□□□ 0.51
VTN-201ENST00000226218 ANXA1P04083 346 aa18.23■□□□□ 0.51
VTN-201ENST00000226218 USPL1Q5W0Q7 1092 aa18.23■□□□□ 0.51
VTN-201ENST00000226218 C11orf57Q6ZUT1 292 aaPredicted RBP18.23■□□□□ 0.51
VTN-201ENST00000226218 PODXL2Q9NZ53 605 aa18.23■□□□□ 0.51
VTN-201ENST00000226218 ERBB3P21860 1342 aa18.23■□□□□ 0.51
VTN-201ENST00000226218 JAK2O60674 1132 aa18.22■□□□□ 0.51
VTN-201ENST00000226218 LTKP29376 864 aa18.22■□□□□ 0.51
VTN-201ENST00000226218 NLRP6P59044 892 aa18.22■□□□□ 0.51
VTN-201ENST00000226218 CCZ1BP86790 482 aa18.22■□□□□ 0.51
VTN-201ENST00000226218 CCZ1P86791 482 aaPredicted RBP18.22■□□□□ 0.51
VTN-201ENST00000226218 NGDNQ8NEJ9 315 aaKnown RBP18.22■□□□□ 0.51
VTN-201ENST00000226218 ZNF397Q8NF99 534 aaPredicted RBP18.22■□□□□ 0.51
VTN-201ENST00000226218 KAZALD1Q96I82 304 aa18.22■□□□□ 0.51
VTN-201ENST00000226218 ARID5BQ14865 1188 aa18.22■□□□□ 0.51
VTN-201ENST00000226218 LGR6Q9HBX8 967 aa18.22■□□□□ 0.51
VTN-201ENST00000226218 UTYO14607 1347 aa18.22■□□□□ 0.51
VTN-201ENST00000226218 ADD1P35611 737 aaKnown RBP18.21■□□□□ 0.51
VTN-201ENST00000226218 TAF3Q5VWG9 929 aa18.21■□□□□ 0.51
VTN-201ENST00000226218 ZNF589Q86UQ0 364 aaPredicted RBP18.21■□□□□ 0.51
VTN-201ENST00000226218 BRF1Q92994 677 aa18.21■□□□□ 0.51
VTN-201ENST00000226218 TLR7Q9NYK1 1049 aaKnown RBP18.21■□□□□ 0.51
VTN-201ENST00000226218 RGPD2P0DJD1 1756 aa18.21■□□□□ 0.51
VTN-201ENST00000226218 COL15A1P39059 1388 aa18.2■□□□□ 0.5
VTN-201ENST00000226218 KMT5BQ4FZB7 885 aa18.2■□□□□ 0.5
VTN-201ENST00000226218 ZSCAN16Q9H4T2 348 aaPredicted RBP18.2■□□□□ 0.5
VTN-201ENST00000226218 ZNF215Q9UL58 517 aaPredicted RBP18.2■□□□□ 0.5
VTN-201ENST00000226218 MAP3K2Q9Y2U5 619 aa18.2■□□□□ 0.5
VTN-201ENST00000226218 TAF5LO75529 589 aa18.2■□□□□ 0.5
VTN-201ENST00000226218 STK3Q13188 491 aa18.2■□□□□ 0.5
VTN-201ENST00000226218 STX1AQ16623 288 aa18.2■□□□□ 0.5
VTN-201ENST00000226218 USHBP1Q8N6Y0 703 aa18.2■□□□□ 0.5
VTN-201ENST00000226218 SMARCC2Q8TAQ2 1214 aa18.2■□□□□ 0.5
VTN-201ENST00000226218 C9orf78Q9NZ63 289 aaPredicted RBP18.2■□□□□ 0.5
VTN-201ENST00000226218 NCAPD2Q15021 1401 aa18.19■□□□□ 0.5
VTN-201ENST00000226218 CTAGE5O15320 804 aa18.19■□□□□ 0.5
VTN-201ENST00000226218 SLFNL1Q499Z3 407 aa18.19■□□□□ 0.5
VTN-201ENST00000226218 ZNF771Q7L3S4 317 aaPredicted RBP18.19■□□□□ 0.5
VTN-201ENST00000226218 CCDC8Q9H0W5 538 aaPredicted RBP18.19■□□□□ 0.5
VTN-201ENST00000226218 DBF4Q9UBU7 674 aaPredicted RBP18.19■□□□□ 0.5
VTN-201ENST00000226218 ANKARQ7Z5J8 1434 aa18.19■□□□□ 0.5
VTN-201ENST00000226218 SIPA1L3O60292 1781 aaPredicted RBP18.19■□□□□ 0.5
VTN-201ENST00000226218 HEG1Q9ULI3 1381 aa18.19■□□□□ 0.5
VTN-201ENST00000226218 KSR2Q6VAB6 950 aa18.19■□□□□ 0.5
VTN-201ENST00000226218 DHX40Q8IX18 779 aaKnown RBP18.19■□□□□ 0.5
VTN-201ENST00000226218 SUCLG2Q96I99 432 aa18.19■□□□□ 0.5
VTN-201ENST00000226218 FSD1Q9BTV5 496 aa18.19■□□□□ 0.5
VTN-201ENST00000226218 HDAC5Q9UQL6 1122 aa18.19■□□□□ 0.5
VTN-201ENST00000226218 GOLGA6L19H0YKK7 550 aa18.18■□□□□ 0.5
VTN-201ENST00000226218 SNW1Q13573 536 aaKnown RBP18.18■□□□□ 0.5
VTN-201ENST00000226218 TERF2Q15554 542 aa18.18■□□□□ 0.5
VTN-201ENST00000226218 PTPN14Q15678 1187 aa18.18■□□□□ 0.5
VTN-201ENST00000226218 ERO1AQ96HE7 468 aa18.18■□□□□ 0.5
VTN-201ENST00000226218 RCOR1Q9UKL0 485 aa18.18■□□□□ 0.5
VTN-201ENST00000226218 CFAP45Q9UL16 551 aa18.18■□□□□ 0.5
VTN-201ENST00000226218 CCDC69A6NI79 296 aa18.17■□□□□ 0.5
VTN-201ENST00000226218 SKILP12757 684 aa18.17■□□□□ 0.5
VTN-201ENST00000226218 KRT32Q14532 448 aa18.17■□□□□ 0.5
VTN-201ENST00000226218 CWF19L2Q2TBE0 894 aaKnown RBP18.17■□□□□ 0.5
VTN-201ENST00000226218 CCAR2Q8N163 923 aaKnown RBP18.17■□□□□ 0.5
VTN-201ENST00000226218 KRT222Q8N1A0 295 aa18.17■□□□□ 0.5
VTN-201ENST00000226218 LTV1Q96GA3 475 aaPredicted RBP18.17■□□□□ 0.5
VTN-201ENST00000226218 BOLA2Q9H3K6 86 aa18.17■□□□□ 0.5
VTN-201ENST00000226218 GOLPH3LQ9H4A5 285 aa18.17■□□□□ 0.5
VTN-201ENST00000226218 ABCC6O95255 1503 aa18.17■□□□□ 0.5
VTN-201ENST00000226218 FAM69CQ0P6D2 419 aa18.17■□□□□ 0.5
VTN-201ENST00000226218 ENGASEQ8NFI3 743 aa18.17■□□□□ 0.5
VTN-201ENST00000226218 PROSER3Q2NL68 480 aa18.16■□□□□ 0.5
VTN-201ENST00000226218 ZNF592Q92610 1267 aa18.16■□□□□ 0.5
VTN-201ENST00000226218 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
VTN-201ENST00000226218 BICC1Q9H694 974 aaKnown RBP18.16■□□□□ 0.5
VTN-201ENST00000226218 USP16Q9Y5T5 823 aa18.16■□□□□ 0.5
VTN-201ENST00000226218 RFX7Q2KHR2 1363 aa18.16■□□□□ 0.5
VTN-201ENST00000226218 NFAT5O94916 1531 aa18.16■□□□□ 0.5
VTN-201ENST00000226218 PHRF1Q9P1Y6 1649 aaKnown RBP18.16■□□□□ 0.5
VTN-201ENST00000226218 GRM8O00222 908 aa18.16■□□□□ 0.5
VTN-201ENST00000226218 G3BP1Q13283 466 aaKnown RBP eCLIP18.16■□□□□ 0.5
VTN-201ENST00000226218 FBXO38Q6PIJ6 1188 aa18.16■□□□□ 0.5
VTN-201ENST00000226218 NEK1Q96PY6 1258 aa18.16■□□□□ 0.5
VTN-201ENST00000226218 AMOTL2Q9Y2J4 779 aa18.16■□□□□ 0.5
VTN-201ENST00000226218 CCAR1Q8IX12 1150 aaKnown RBP18.15■□□□□ 0.5
VTN-201ENST00000226218 OVOS2A0A0G2JMS6 1433 aa18.15■□□□□ 0.5
VTN-201ENST00000226218 BTBD11A6QL63 1104 aa18.14■□□□□ 0.5
VTN-201ENST00000226218 SCRN1Q12765 414 aa18.14■□□□□ 0.5
VTN-201ENST00000226218 NUTM2GQ5VZR2 741 aa18.14■□□□□ 0.5
VTN-201ENST00000226218 NAA16Q6N069 864 aaPredicted RBP18.14■□□□□ 0.5
VTN-201ENST00000226218 LINS1Q8NG48 757 aa18.14■□□□□ 0.5
VTN-201ENST00000226218 SLC26A8Q96RN1 970 aa18.14■□□□□ 0.5
VTN-201ENST00000226218 LLPHQ9BRT6 129 aaKnown RBP18.14■□□□□ 0.5
VTN-201ENST00000226218 OSBPL5Q9H0X9 879 aaPredicted RBP18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms