RNA–Protein interactions for RNA: ENST00000225831.4

CCL2-201, Transcript of C-C motif chemokine ligand 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL2, Length 741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2-201ENST00000225831 NBPF1Q3BBV0 1214 aa9.46□□□□□ -0.9
CCL2-201ENST00000225831 GPR161Q8N6U8 529 aaKnown RBP9.46□□□□□ -0.9
CCL2-201ENST00000225831 ZNF784Q8NCA9 323 aaPredicted RBP9.46□□□□□ -0.9
CCL2-201ENST00000225831 CDV3Q9UKY7 258 aaKnown RBP9.46□□□□□ -0.9
CCL2-201ENST00000225831 SBNO2Q9Y2G9 1366 aa9.46□□□□□ -0.9
CCL2-201ENST00000225831 RALGAPBQ86X10 1494 aa9.46□□□□□ -0.9
CCL2-201ENST00000225831 WNK3Q9BYP7 1800 aa9.45□□□□□ -0.9
CCL2-201ENST00000225831 ADD1P35611 737 aaKnown RBP9.45□□□□□ -0.9
CCL2-201ENST00000225831 NBPF8Q3BBV2 869 aa9.45□□□□□ -0.9
CCL2-201ENST00000225831 CDCA8Q53HL2 280 aa9.45□□□□□ -0.9
CCL2-201ENST00000225831 ZNF385CQ66K41 422 aaPredicted RBP9.45□□□□□ -0.9
CCL2-201ENST00000225831 GJD4Q96KN9 370 aaPredicted RBP9.45□□□□□ -0.9
CCL2-201ENST00000225831 PCMTD1Q96MG8 357 aaPredicted RBP9.45□□□□□ -0.9
CCL2-201ENST00000225831 HIRIP3Q9BW71 556 aaPredicted RBP9.45□□□□□ -0.9
CCL2-201ENST00000225831 ZNF395Q9H8N7 513 aaPredicted RBP9.45□□□□□ -0.9
CCL2-201ENST00000225831 CENPJQ9HC77 1338 aaPredicted RBP9.45□□□□□ -0.9
CCL2-201ENST00000225831 SRCAPQ6ZRS2 3230 aa9.44□□□□□ -0.9
CCL2-201ENST00000225831 ERVH48-1M5A8F1 160 aa9.44□□□□□ -0.9
CCL2-201ENST00000225831 LILRA1O75019 489 aa9.44□□□□□ -0.9
CCL2-201ENST00000225831 BRPF1P55201 1214 aaPredicted RBP9.44□□□□□ -0.9
CCL2-201ENST00000225831 DHX9Q08211 1270 aaKnown RBP9.44□□□□□ -0.9
CCL2-201ENST00000225831 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.44□□□□□ -0.9
CCL2-201ENST00000225831 KDF1Q8NAX2 398 aaPredicted RBP9.44□□□□□ -0.9
CCL2-201ENST00000225831 NGLY1Q96IV0 654 aa9.44□□□□□ -0.9
CCL2-201ENST00000225831 INSM2Q96T92 566 aaPredicted RBP9.44□□□□□ -0.9
CCL2-201ENST00000225831 GOPCQ9HD26 462 aa9.44□□□□□ -0.9
CCL2-201ENST00000225831 ATRNO75882 1429 aa9.44□□□□□ -0.9
CCL2-201ENST00000225831 MON2Q7Z3U7 1717 aa9.44□□□□□ -0.9
CCL2-201ENST00000225831 BCL9LQ86UU0 1499 aa9.43□□□□□ -0.9
CCL2-201ENST00000225831 SPATA31A3Q5VYP0 1347 aa9.43□□□□□ -0.9
CCL2-201ENST00000225831 EVC2Q86UK5 1308 aa9.43□□□□□ -0.9
CCL2-201ENST00000225831 PRR36Q9H6K5 1346 aa9.43□□□□□ -0.9
CCL2-201ENST00000225831 WASLO00401 505 aaPredicted RBP9.43□□□□□ -0.9
CCL2-201ENST00000225831 RXRBP28702 533 aa9.43□□□□□ -0.9
CCL2-201ENST00000225831 DZIP3Q86Y13 1208 aaKnown RBP9.43□□□□□ -0.9
CCL2-201ENST00000225831 LTN1O94822 1766 aa9.42□□□□□ -0.9
CCL2-201ENST00000225831 NRKQ7Z2Y5 1582 aa9.42□□□□□ -0.9
CCL2-201ENST00000225831 SLIT2O94813 1529 aa9.42□□□□□ -0.9
CCL2-201ENST00000225831 KRT28Q7Z3Y7 464 aa9.42□□□□□ -0.9
CCL2-201ENST00000225831 CNTNAP3BQ96NU0 1288 aa9.42□□□□□ -0.9
CCL2-201ENST00000225831 CNTNAP3Q9BZ76 1288 aa9.42□□□□□ -0.9
CCL2-201ENST00000225831 QTRT2Q9H974 415 aaKnown RBP9.42□□□□□ -0.9
CCL2-201ENST00000225831 PIK3C2AO00443 1686 aa9.42□□□□□ -0.9
CCL2-201ENST00000225831 SBNO1A3KN83 1393 aa9.41□□□□□ -0.9
CCL2-201ENST00000225831 SBF2Q86WG5 1849 aa9.41□□□□□ -0.9
CCL2-201ENST00000225831 ESPNB1AK53 854 aa9.41□□□□□ -0.9
CCL2-201ENST00000225831 ARHGEF15O94989 841 aa9.41□□□□□ -0.9
CCL2-201ENST00000225831 NBPF20Q3BBV1 942 aa9.41□□□□□ -0.9
CCL2-201ENST00000225831 PMFBP1Q8TBY8 1022 aa9.41□□□□□ -0.9
CCL2-201ENST00000225831 USP21Q9UK80 565 aa9.41□□□□□ -0.9
CCL2-201ENST00000225831 ARHGEF10O15013 1369 aa9.4□□□□□ -0.9
CCL2-201ENST00000225831 BRD4O60885 1362 aaPredicted RBP9.4□□□□□ -0.9
CCL2-201ENST00000225831 RGPD1P0DJD0 1748 aa9.4□□□□□ -0.9
CCL2-201ENST00000225831 FBXO45P0C2W1 286 aa9.4□□□□□ -0.9
CCL2-201ENST00000225831 RBM6P78332 1123 aaKnown RBP9.4□□□□□ -0.9
CCL2-201ENST00000225831 EIF4G2P78344 907 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCL2-201ENST00000225831 PSME1Q06323 249 aa9.4□□□□□ -0.9
CCL2-201ENST00000225831 TMEM259Q4ZIN3 620 aa9.4□□□□□ -0.9
CCL2-201ENST00000225831 FNBP4Q8N3X1 1017 aaPredicted RBP9.4□□□□□ -0.9
CCL2-201ENST00000225831 CCDC155Q8N6L0 562 aa9.4□□□□□ -0.9
CCL2-201ENST00000225831 POLMQ9NP87 494 aaPredicted RBP9.4□□□□□ -0.9
CCL2-201ENST00000225831 TNS1Q9HBL0 1735 aaKnown RBP9.39□□□□□ -0.91
CCL2-201ENST00000225831 LMO7Q8WWI1 1683 aa9.39□□□□□ -0.91
CCL2-201ENST00000225831 SLC35F4A4IF30 521 aa9.39□□□□□ -0.91
CCL2-201ENST00000225831 TMF1P82094 1093 aa9.39□□□□□ -0.91
CCL2-201ENST00000225831 FOXD4L5Q5VV16 416 aaPredicted RBP9.39□□□□□ -0.91
CCL2-201ENST00000225831 SVOPQ8N4V2 548 aa9.39□□□□□ -0.91
CCL2-201ENST00000225831 CYLDQ9NQC7 956 aa9.39□□□□□ -0.91
CCL2-201ENST00000225831 THSD7AQ9UPZ6 1657 aa9.39□□□□□ -0.91
CCL2-201ENST00000225831 ATAD2Q6PL18 1390 aa9.38□□□□□ -0.91
CCL2-201ENST00000225831 NINLQ9Y2I6 1382 aa9.38□□□□□ -0.91
CCL2-201ENST00000225831 GIGYF1O75420 1035 aaPredicted RBP9.38□□□□□ -0.91
CCL2-201ENST00000225831 ADH1AP07327 375 aa9.38□□□□□ -0.91
CCL2-201ENST00000225831 PNMA1Q8ND90 353 aa9.38□□□□□ -0.91
CCL2-201ENST00000225831 RNF217Q8TC41 542 aa9.38□□□□□ -0.91
CCL2-201ENST00000225831 CDK19Q9BWU1 502 aa9.38□□□□□ -0.91
CCL2-201ENST00000225831 TRPC5Q9UL62 973 aaPredicted RBP9.38□□□□□ -0.91
CCL2-201ENST00000225831 USP54Q70EL1 1684 aa9.38□□□□□ -0.91
CCL2-201ENST00000225831 COL18A1P39060 1754 aa9.37□□□□□ -0.91
CCL2-201ENST00000225831 ST20-MTHFSA0A0A6YYL1 179 aa9.37□□□□□ -0.91
CCL2-201ENST00000225831 ZBBXA8MT70 800 aa9.37□□□□□ -0.91
CCL2-201ENST00000225831 MSTNO14793 375 aa9.37□□□□□ -0.91
CCL2-201ENST00000225831 GPR37L1O60883 481 aa9.37□□□□□ -0.91
CCL2-201ENST00000225831 NUDT16Q96DE0 195 aaKnown RBP9.37□□□□□ -0.91
CCL2-201ENST00000225831 PCDHB9Q9Y5E1 797 aa9.37□□□□□ -0.91
CCL2-201ENST00000225831 USP47Q96K76 1375 aa9.37□□□□□ -0.91
CCL2-201ENST00000225831 SENP3-EIF4A1A0A087X0R7 540 aa9.36□□□□□ -0.91
CCL2-201ENST00000225831 SRPK2P78362 688 aaKnown RBP9.36□□□□□ -0.91
CCL2-201ENST00000225831 SCARF2Q96GP6 870 aaPredicted RBP9.36□□□□□ -0.91
CCL2-201ENST00000225831 PARP4Q9UKK3 1724 aaKnown RBP9.36□□□□□ -0.91
CCL2-201ENST00000225831 POLR3AO14802 1390 aaPredicted RBP9.36□□□□□ -0.91
CCL2-201ENST00000225831 RGPD2P0DJD1 1756 aa9.35□□□□□ -0.91
CCL2-201ENST00000225831 SLURP2P0DP57 97 aa9.35□□□□□ -0.91
CCL2-201ENST00000225831 PTGIRP43119 386 aa9.35□□□□□ -0.91
CCL2-201ENST00000225831 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
CCL2-201ENST00000225831 PPIP5K1Q6PFW1 1433 aa9.35□□□□□ -0.91
CCL2-201ENST00000225831 NGDNQ8NEJ9 315 aaKnown RBP9.35□□□□□ -0.91
CCL2-201ENST00000225831 WHAMMQ8TF30 809 aa9.35□□□□□ -0.91
CCL2-201ENST00000225831 TESK2Q96S53 571 aa9.35□□□□□ -0.91
CCL2-201ENST00000225831 KIF20BQ96Q89 1820 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms