RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 GPR108Q9NPR9 543 aa26.24■■□□□ 1.79
SMARCD2-201ENST00000225742 PAPPAQ13219 1627 aa26.24■■□□□ 1.79
SMARCD2-201ENST00000225742 TAF5LO75529 589 aa26.23■■□□□ 1.79
SMARCD2-201ENST00000225742 PDCP20941 246 aa26.23■■□□□ 1.79
SMARCD2-201ENST00000225742 NKX1-1Q15270 411 aaPredicted RBP26.23■■□□□ 1.79
SMARCD2-201ENST00000225742 HAUS7Q99871 368 aa26.23■■□□□ 1.79
SMARCD2-201ENST00000225742 LARP6Q9BRS8 491 aaKnown RBP26.23■■□□□ 1.79
SMARCD2-201ENST00000225742 UVSSAQ2YD98 709 aa26.23■■□□□ 1.79
SMARCD2-201ENST00000225742 GDPD2Q9HCC8 539 aa26.23■■□□□ 1.79
SMARCD2-201ENST00000225742 TPCN1Q9ULQ1 816 aa26.22■■□□□ 1.79
SMARCD2-201ENST00000225742 U3KPZ7 1027 aaPredicted RBP26.22■■□□□ 1.79
SMARCD2-201ENST00000225742 ATP5J2-PTCD1G3V325 749 aa26.21■■□□□ 1.79
SMARCD2-201ENST00000225742 PTCD1O75127 700 aaKnown RBP26.21■■□□□ 1.79
SMARCD2-201ENST00000225742 ST3GAL1Q11201 340 aa26.21■■□□□ 1.79
SMARCD2-201ENST00000225742 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.21■■□□□ 1.79
SMARCD2-201ENST00000225742 MSNP26038 577 aaKnown RBP26.21■■□□□ 1.79
SMARCD2-201ENST00000225742 CWC25Q9NXE8 425 aaPredicted RBP26.21■■□□□ 1.79
SMARCD2-201ENST00000225742 XIRP1Q702N8 1843 aaKnown RBP26.21■■□□□ 1.79
SMARCD2-201ENST00000225742 NBPF26B4DH59 902 aa26.2■■□□□ 1.78
SMARCD2-201ENST00000225742 MCM5P33992 734 aa26.2■■□□□ 1.78
SMARCD2-201ENST00000225742 FOXO4P98177 505 aa26.2■■□□□ 1.78
SMARCD2-201ENST00000225742 FOXD4L6Q3SYB3 417 aaPredicted RBP26.2■■□□□ 1.78
SMARCD2-201ENST00000225742 NBPF14Q5TI25 921 aa26.2■■□□□ 1.78
SMARCD2-201ENST00000225742 NBPF10Q6P3W6 841 aaKnown RBP26.2■■□□□ 1.78
SMARCD2-201ENST00000225742 FOXD4L3Q6VB84 417 aaPredicted RBP26.2■■□□□ 1.78
SMARCD2-201ENST00000225742 NBPF15Q8N660 670 aa26.2■■□□□ 1.78
SMARCD2-201ENST00000225742 PIP4K2AP48426 406 aaPredicted RBP26.19■■□□□ 1.78
SMARCD2-201ENST00000225742 NOL7Q9UMY1 257 aaKnown RBP26.19■■□□□ 1.78
SMARCD2-201ENST00000225742 KCPQ6ZWJ8 1503 aa26.19■■□□□ 1.78
SMARCD2-201ENST00000225742 LMBR1LQ6UX01 489 aa26.18■■□□□ 1.78
SMARCD2-201ENST00000225742 ZNF589Q86UQ0 364 aaPredicted RBP26.18■■□□□ 1.78
SMARCD2-201ENST00000225742 TJP1Q07157 1748 aa26.18■■□□□ 1.78
SMARCD2-201ENST00000225742 BRINP3Q76B58 766 aa26.18■■□□□ 1.78
SMARCD2-201ENST00000225742 CCDC191Q8NCU4 936 aa26.18■■□□□ 1.78
SMARCD2-201ENST00000225742 JARID2Q92833 1246 aaPredicted RBP26.18■■□□□ 1.78
SMARCD2-201ENST00000225742 PRDM11Q9NQV5 511 aa26.18■■□□□ 1.78
SMARCD2-201ENST00000225742 CCDC39Q9UFE4 941 aa26.18■■□□□ 1.78
SMARCD2-201ENST00000225742 MCMDC2Q4G0Z9 681 aa26.17■■□□□ 1.78
SMARCD2-201ENST00000225742 DBNDD2Q9BQY9 259 aa26.17■■□□□ 1.78
SMARCD2-201ENST00000225742 ATG3Q9NT62 314 aa26.17■■□□□ 1.78
SMARCD2-201ENST00000225742 PALLDQ8WX93 1383 aa26.17■■□□□ 1.78
SMARCD2-201ENST00000225742 SH3TC1Q8TE82 1336 aa26.16■■□□□ 1.78
SMARCD2-201ENST00000225742 IL15P40933 162 aaPredicted RBP26.16■■□□□ 1.78
SMARCD2-201ENST00000225742 LARP1BQ659C4 914 aaKnown RBP26.16■■□□□ 1.78
SMARCD2-201ENST00000225742 TOM1L2Q6ZVM7 507 aa26.16■■□□□ 1.78
SMARCD2-201ENST00000225742 NAP1L5Q96NT1 182 aaPredicted RBP26.16■■□□□ 1.78
SMARCD2-201ENST00000225742 COL5A2P05997 1499 aaPredicted RBP26.16■■□□□ 1.78
SMARCD2-201ENST00000225742 TNS2Q63HR2 1409 aa26.16■■□□□ 1.78
SMARCD2-201ENST00000225742 NECAB1Q8N987 351 aa26.16■■□□□ 1.78
SMARCD2-201ENST00000225742 KBTBD3Q8NAB2 608 aa26.16■■□□□ 1.78
SMARCD2-201ENST00000225742 CARD10Q9BWT7 1032 aa26.16■■□□□ 1.78
SMARCD2-201ENST00000225742 SOS2Q07890 1332 aaPredicted RBP26.15■■□□□ 1.78
SMARCD2-201ENST00000225742 TOB2Q14106 344 aaPredicted RBP26.15■■□□□ 1.78
SMARCD2-201ENST00000225742 ZNF609O15014 1411 aa26.15■■□□□ 1.78
SMARCD2-201ENST00000225742 SPEF2Q9C093 1822 aa26.14■■□□□ 1.78
SMARCD2-201ENST00000225742 FIBPO43427 364 aa26.14■■□□□ 1.77
SMARCD2-201ENST00000225742 CIAO1O76071 339 aa26.14■■□□□ 1.77
SMARCD2-201ENST00000225742 IL2RBP14784 551 aa26.14■■□□□ 1.77
SMARCD2-201ENST00000225742 ATG9AQ7Z3C6 839 aa26.14■■□□□ 1.77
SMARCD2-201ENST00000225742 EDC3Q96F86 508 aaKnown RBP26.14■■□□□ 1.77
SMARCD2-201ENST00000225742 NEK1Q96PY6 1258 aa26.14■■□□□ 1.77
SMARCD2-201ENST00000225742 HELLSQ9NRZ9 838 aa26.14■■□□□ 1.77
SMARCD2-201ENST00000225742 VPS37CA5D8V6 355 aaPredicted RBP26.13■■□□□ 1.77
SMARCD2-201ENST00000225742 DNM1Q05193 864 aaKnown RBP26.13■■□□□ 1.77
SMARCD2-201ENST00000225742 DDX54Q8TDD1 881 aaKnown RBP26.13■■□□□ 1.77
SMARCD2-201ENST00000225742 DNAJC2Q99543 621 aaKnown RBP26.13■■□□□ 1.77
SMARCD2-201ENST00000225742 ELP1O95163 1332 aa26.12■■□□□ 1.77
SMARCD2-201ENST00000225742 ZNF500O60304 480 aaPredicted RBP26.12■■□□□ 1.77
SMARCD2-201ENST00000225742 TTLL7Q6ZT98 887 aa26.12■■□□□ 1.77
SMARCD2-201ENST00000225742 KRT85P78386 507 aa26.11■■□□□ 1.77
SMARCD2-201ENST00000225742 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.11■■□□□ 1.77
SMARCD2-201ENST00000225742 SHANK3Q9BYB0 1731 aa26.11■■□□□ 1.77
SMARCD2-201ENST00000225742 HMGB1P09429 215 aaKnown RBP26.11■■□□□ 1.77
SMARCD2-201ENST00000225742 RNF214Q8ND24 703 aa26.11■■□□□ 1.77
SMARCD2-201ENST00000225742 FBXO3Q9UK99 471 aa26.11■■□□□ 1.77
SMARCD2-201ENST00000225742 ABCA3Q99758 1704 aa26.1■■□□□ 1.77
SMARCD2-201ENST00000225742 EYA2O00167 538 aa26.1■■□□□ 1.77
SMARCD2-201ENST00000225742 ZKSCAN5Q9Y2L8 839 aa26.1■■□□□ 1.77
SMARCD2-201ENST00000225742 CHMP3Q9Y3E7 222 aa26.1■■□□□ 1.77
SMARCD2-201ENST00000225742 OFD1O75665 1012 aa26.09■■□□□ 1.77
SMARCD2-201ENST00000225742 DSCC1Q9BVC3 393 aa26.09■■□□□ 1.77
SMARCD2-201ENST00000225742 PAG1Q9NWQ8 432 aa26.09■■□□□ 1.77
SMARCD2-201ENST00000225742 TAF6LQ9Y6J9 622 aa26.09■■□□□ 1.77
SMARCD2-201ENST00000225742 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.08■■□□□ 1.77
SMARCD2-201ENST00000225742 GTF3C6Q969F1 213 aa26.08■■□□□ 1.77
SMARCD2-201ENST00000225742 A1BGP04217 495 aa26.07■■□□□ 1.76
SMARCD2-201ENST00000225742 ISCA1Q9BUE6 129 aa26.07■■□□□ 1.76
SMARCD2-201ENST00000225742 SCAND2PQ9GZW5 306 aaPredicted RBP26.07■■□□□ 1.76
SMARCD2-201ENST00000225742 TRIM28Q13263 835 aaKnown RBP26.07■■□□□ 1.76
SMARCD2-201ENST00000225742 DDX46Q7L014 1031 aaKnown RBP26.07■■□□□ 1.76
SMARCD2-201ENST00000225742 TEX13AQ9BXU3 409 aaPredicted RBP26.07■■□□□ 1.76
SMARCD2-201ENST00000225742 ZMYM1Q5SVZ6 1142 aa26.06■■□□□ 1.76
SMARCD2-201ENST00000225742 NEUROD6Q96NK8 337 aa26.06■■□□□ 1.76
SMARCD2-201ENST00000225742 LLPHQ9BRT6 129 aaKnown RBP26.06■■□□□ 1.76
SMARCD2-201ENST00000225742 CYP21A2P08686 494 aa26.05■■□□□ 1.76
SMARCD2-201ENST00000225742 LRRFIP1Q32MZ4 808 aaKnown RBP26.05■■□□□ 1.76
SMARCD2-201ENST00000225742 CDC37L1Q7L3B6 337 aa26.05■■□□□ 1.76
SMARCD2-201ENST00000225742 FUCA2Q9BTY2 467 aa26.05■■□□□ 1.76
SMARCD2-201ENST00000225742 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.05■■□□□ 1.76
SMARCD2-201ENST00000225742 TERF1P54274 439 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms