RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 IGF1RP08069 1367 aa16.96■□□□□ 0.3
UBR5-201ENST00000220959 LRPPRCP42704 1394 aaKnown RBP16.95■□□□□ 0.3
UBR5-201ENST00000220959 WTAPQ15007 396 aa16.95■□□□□ 0.3
UBR5-201ENST00000220959 NSRP1Q9H0G5 558 aaKnown RBP16.95■□□□□ 0.3
UBR5-201ENST00000220959 MRVI1Q9Y6F6 885 aa16.95■□□□□ 0.3
UBR5-201ENST00000220959 CCDC152Q4G0S7 254 aa16.95■□□□□ 0.3
UBR5-201ENST00000220959 B4DLN1 442 aa16.95■□□□□ 0.3
UBR5-201ENST00000220959 SH3BP5O60239 455 aa16.95■□□□□ 0.3
UBR5-201ENST00000220959 MRPL12P52815 198 aaKnown RBP16.95■□□□□ 0.3
UBR5-201ENST00000220959 UQCRFS1P1P0C7P4 283 aa16.95■□□□□ 0.3
UBR5-201ENST00000220959 FAM212AQ96EL1 285 aa16.95■□□□□ 0.3
UBR5-201ENST00000220959 RAPGEF3O95398 923 aa16.95■□□□□ 0.3
UBR5-201ENST00000220959 TAF12Q16514 161 aa16.95■□□□□ 0.3
UBR5-201ENST00000220959 SNRKQ9NRH2 765 aa16.95■□□□□ 0.3
UBR5-201ENST00000220959 PRG4Q92954 1404 aaPredicted RBP16.95■□□□□ 0.3
UBR5-201ENST00000220959 DPH6Q7L8W6 267 aa16.95■□□□□ 0.3
UBR5-201ENST00000220959 CASKIN1Q8WXD9 1431 aa16.94■□□□□ 0.3
UBR5-201ENST00000220959 MCM5P33992 734 aa16.94■□□□□ 0.3
UBR5-201ENST00000220959 PLS1Q14651 629 aa16.94■□□□□ 0.3
UBR5-201ENST00000220959 SNX16P57768 344 aa16.94■□□□□ 0.3
UBR5-201ENST00000220959 CCDC77Q9BR77 488 aa16.94■□□□□ 0.3
UBR5-201ENST00000220959 TXNDC16Q9P2K2 825 aa16.94■□□□□ 0.3
UBR5-201ENST00000220959 ATP2A1O14983 1001 aa16.94■□□□□ 0.3
UBR5-201ENST00000220959 GNG11P61952 73 aa16.93■□□□□ 0.3
UBR5-201ENST00000220959 CTAGE1Q96RT6 745 aa16.93■□□□□ 0.3
UBR5-201ENST00000220959 KRT23Q9C075 422 aa16.93■□□□□ 0.3
UBR5-201ENST00000220959 ECHDC1Q9NTX5 307 aa16.93■□□□□ 0.3
UBR5-201ENST00000220959 FOXO3O43524 673 aa16.93■□□□□ 0.3
UBR5-201ENST00000220959 SYKP43405 635 aa16.93■□□□□ 0.3
UBR5-201ENST00000220959 UBASH3AP57075 661 aa16.93■□□□□ 0.3
UBR5-201ENST00000220959 ZSCAN16Q9H4T2 348 aaPredicted RBP16.93■□□□□ 0.3
UBR5-201ENST00000220959 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
UBR5-201ENST00000220959 TMTC2Q8N394 836 aa16.93■□□□□ 0.3
UBR5-201ENST00000220959 ZSWIM4Q9H7M6 989 aa16.93■□□□□ 0.3
UBR5-201ENST00000220959 GTF2F1P35269 517 aaKnown RBP eCLIP16.92■□□□□ 0.32e-7■■■■■ 28.8
UBR5-201ENST00000220959 HEATR3Q7Z4Q2 680 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 ANAPC4Q9UJX5 808 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 HMG20BQ9P0W2 317 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 ZBTB16Q05516 673 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 NBPF6Q5VWK0 638 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 NBPF5PQ86XG9 351 aaPredicted RBP16.92■□□□□ 0.3
UBR5-201ENST00000220959 NBPF4Q96M43 638 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 HSPA4P34932 840 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 ZNF165P49910 485 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 CEP83Q9Y592 693 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 ADCY5O95622 1261 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 AFMP43652 599 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 PRDM10Q9NQV6 1147 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 CCDC160A6NGH7 325 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 TMEM110-MUSTN1A8MSY1 372 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 GNAQP50148 359 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 RRAGBQ5VZM2 374 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 ERICH3Q5RHP9 1530 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 BMP15O95972 392 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 EEF2P13639 858 aaKnown RBP16.92■□□□□ 0.3
UBR5-201ENST00000220959 CCDC117Q8IWD4 279 aaPredicted RBP16.92■□□□□ 0.3
UBR5-201ENST00000220959 CEP135Q66GS9 1140 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 RAB11FIP4Q86YS3 637 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 IFNL2Q8IZJ0 200 aa16.92■□□□□ 0.3
UBR5-201ENST00000220959 ABCC11Q96J66 1382 aa16.91■□□□□ 0.3
UBR5-201ENST00000220959 ATP2C2O75185 946 aa16.91■□□□□ 0.3
UBR5-201ENST00000220959 C6orf50Q9HD87 102 aa16.91■□□□□ 0.3
UBR5-201ENST00000220959 IPO4Q8TEX9 1081 aaKnown RBP16.91■□□□□ 0.3
UBR5-201ENST00000220959 GDPD2Q9HCC8 539 aa16.91■□□□□ 0.3
UBR5-201ENST00000220959 RBM25P49756 843 aaKnown RBP16.91■□□□□ 0.3
UBR5-201ENST00000220959 SETDB2Q96T68 719 aa16.91■□□□□ 0.3
UBR5-201ENST00000220959 GJC1P36383 396 aa16.91■□□□□ 0.3
UBR5-201ENST00000220959 GPATCH11Q8N954 259 aa16.91■□□□□ 0.3
UBR5-201ENST00000220959 SMC6Q96SB8 1091 aa16.91■□□□□ 0.3
UBR5-201ENST00000220959 F8W031 263 aaPredicted RBP16.91■□□□□ 0.3
UBR5-201ENST00000220959 TPD52P55327 224 aaPredicted RBP16.91■□□□□ 0.3
UBR5-201ENST00000220959 STMN4Q9H169 189 aaPredicted RBP16.91■□□□□ 0.3
UBR5-201ENST00000220959 PHF8Q9UPP1 1060 aa16.91■□□□□ 0.3
UBR5-201ENST00000220959 ZBTB43O43298 467 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 CALM1P0DP23 149 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 CALM2P0DP24 149 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 CALM3P0DP25 149 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 KIAA1524Q8TCG1 905 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 CYP7A1P22680 504 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 KRT28Q7Z3Y7 464 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 CCDC14Q49A88 953 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 SMARCC2Q8TAQ2 1214 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 FAM13AO94988 1023 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 UBE2HP62256 183 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 SMC1BQ8NDV3 1235 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 CFTRP13569 1480 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 GAS8O95995 478 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 SSFA2P28290 1259 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 TRERF1Q96PN7 1200 aa16.9■□□□□ 0.3
UBR5-201ENST00000220959 ESR2Q92731 530 aa16.89■□□□□ 0.3
UBR5-201ENST00000220959 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.3
UBR5-201ENST00000220959 PLCB3Q01970 1234 aa16.89■□□□□ 0.29
UBR5-201ENST00000220959 MSANTD4Q8NCY6 345 aa16.89■□□□□ 0.29
UBR5-201ENST00000220959 NAIPQ13075 1403 aa16.89■□□□□ 0.29
UBR5-201ENST00000220959 FLIIQ13045 1269 aa16.89■□□□□ 0.29
UBR5-201ENST00000220959 RTN1Q16799 776 aa16.89■□□□□ 0.29
UBR5-201ENST00000220959 GRIN2BQ13224 1484 aa16.89■□□□□ 0.29
UBR5-201ENST00000220959 UBE3BQ7Z3V4 1068 aa16.89■□□□□ 0.29
UBR5-201ENST00000220959 ALG1Q9BT22 464 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms