RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 PUF60Q9UHX1 559 aaKnown RBP20.48■□□□□ 0.87
EXTL3-201ENST00000220562 FBLN1P23142 703 aa20.48■□□□□ 0.87
EXTL3-201ENST00000220562 C14orf93Q9H972 538 aaKnown RBP20.48■□□□□ 0.87
EXTL3-201ENST00000220562 MYO1BO43795 1136 aa20.48■□□□□ 0.87
EXTL3-201ENST00000220562 RRAGBQ5VZM2 374 aa20.48■□□□□ 0.87
EXTL3-201ENST00000220562 SMARCC1Q92922 1105 aaPredicted RBP20.48■□□□□ 0.87
EXTL3-201ENST00000220562 STAMBPO95630 424 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 AFMP43652 599 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 LRSAM1Q6UWE0 723 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 ANKRD13DQ6ZTN6 518 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 LRRC27Q9C0I9 530 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 NGLY1Q96IV0 654 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 RMND1Q9NWS8 449 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 GSTO1P78417 241 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 KLHL40Q2TBA0 621 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 CCDC152Q4G0S7 254 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 MEIS3Q99687 375 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 KRT23Q9C075 422 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 ZSWIM4Q9H7M6 989 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 TSPY3P0CV98 308 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 TSPY8P0CW00 308 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 HCLS1P14317 486 aaPredicted RBP20.47■□□□□ 0.87
EXTL3-201ENST00000220562 HDAC1Q13547 482 aaPredicted RBP20.47■□□□□ 0.87
EXTL3-201ENST00000220562 SLC4A4Q9Y6R1 1079 aa20.47■□□□□ 0.87
EXTL3-201ENST00000220562 IFIT1BQ5T764 474 aaKnown RBP20.46■□□□□ 0.87
EXTL3-201ENST00000220562 RPRD2Q5VT52 1461 aaKnown RBP20.46■□□□□ 0.87
EXTL3-201ENST00000220562 GNG11P61952 73 aa20.46■□□□□ 0.87
EXTL3-201ENST00000220562 ANO6Q4KMQ2 910 aa20.46■□□□□ 0.87
EXTL3-201ENST00000220562 ALG1Q9BT22 464 aa20.46■□□□□ 0.87
EXTL3-201ENST00000220562 N4BP3O15049 544 aa20.46■□□□□ 0.87
EXTL3-201ENST00000220562 TTC21AQ8NDW8 1320 aa20.46■□□□□ 0.87
EXTL3-201ENST00000220562 TBCAO75347 108 aaKnown RBP20.46■□□□□ 0.87
EXTL3-201ENST00000220562 NF2P35240 595 aa20.46■□□□□ 0.87
EXTL3-201ENST00000220562 RFC4P35249 363 aa20.46■□□□□ 0.87
EXTL3-201ENST00000220562 UBASH3AP57075 661 aa20.46■□□□□ 0.87
EXTL3-201ENST00000220562 CHRNA2Q15822 529 aa20.46■□□□□ 0.87
EXTL3-201ENST00000220562 BICD1Q96G01 975 aa20.46■□□□□ 0.87
EXTL3-201ENST00000220562 GTF2F1P35269 517 aaKnown RBP eCLIP20.45■□□□□ 0.86
EXTL3-201ENST00000220562 ZNF622Q969S3 477 aaKnown RBP eCLIP20.45■□□□□ 0.86
EXTL3-201ENST00000220562 STAT6P42226 847 aa20.45■□□□□ 0.86
EXTL3-201ENST00000220562 Q6ZUG5 572 aa20.45■□□□□ 0.86
EXTL3-201ENST00000220562 RALGAPBQ86X10 1494 aa20.45■□□□□ 0.86
EXTL3-201ENST00000220562 ZBTB43O43298 467 aa20.45■□□□□ 0.86
EXTL3-201ENST00000220562 ST5P78524 1137 aa20.45■□□□□ 0.86
EXTL3-201ENST00000220562 USP48Q86UV5 1035 aa20.45■□□□□ 0.86
EXTL3-201ENST00000220562 ZNF830Q96NB3 372 aaPredicted RBP20.45■□□□□ 0.86
EXTL3-201ENST00000220562 SPDYE4A6NLX3 237 aa20.45■□□□□ 0.86
EXTL3-201ENST00000220562 CYP7A1P22680 504 aa20.45■□□□□ 0.86
EXTL3-201ENST00000220562 WDHD1O75717 1129 aaPredicted RBP20.44■□□□□ 0.86
EXTL3-201ENST00000220562 RBM8AQ9Y5S9 174 aaKnown RBP20.44■□□□□ 0.86
EXTL3-201ENST00000220562 CCDC175P0C221 793 aa20.44■□□□□ 0.86
EXTL3-201ENST00000220562 ESYT1Q9BSJ8 1104 aa20.44■□□□□ 0.86
EXTL3-201ENST00000220562 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.44■□□□□ 0.86
EXTL3-201ENST00000220562 HSP90AA4PQ58FG1 418 aa20.44■□□□□ 0.86
EXTL3-201ENST00000220562 TCEANC2Q96MN5 208 aa20.44■□□□□ 0.86
EXTL3-201ENST00000220562 RBM25P49756 843 aaKnown RBP20.43■□□□□ 0.86
EXTL3-201ENST00000220562 PAXBP1Q9Y5B6 917 aa20.43■□□□□ 0.86
EXTL3-201ENST00000220562 HEATR3Q7Z4Q2 680 aa20.43■□□□□ 0.86
EXTL3-201ENST00000220562 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.43■□□□□ 0.86
EXTL3-201ENST00000220562 TRERF1Q96PN7 1200 aa20.43■□□□□ 0.86
EXTL3-201ENST00000220562 STX8Q9UNK0 236 aa20.43■□□□□ 0.86
EXTL3-201ENST00000220562 XAGE3Q8WTP9 111 aa20.43■□□□□ 0.86
EXTL3-201ENST00000220562 MAP3K1Q13233 1512 aa20.43■□□□□ 0.86
EXTL3-201ENST00000220562 RTN1Q16799 776 aa20.43■□□□□ 0.86
EXTL3-201ENST00000220562 MCMDC2Q4G0Z9 681 aa20.43■□□□□ 0.86
EXTL3-201ENST00000220562 TICAM2Q86XR7 235 aa20.43■□□□□ 0.86
EXTL3-201ENST00000220562 NBPF6Q5VWK0 638 aa20.42■□□□□ 0.86
EXTL3-201ENST00000220562 NBPF5PQ86XG9 351 aaPredicted RBP20.42■□□□□ 0.86
EXTL3-201ENST00000220562 NBPF4Q96M43 638 aa20.42■□□□□ 0.86
EXTL3-201ENST00000220562 PDE1AP54750 535 aa20.42■□□□□ 0.86
EXTL3-201ENST00000220562 ARHGAP45Q92619 1136 aa20.42■□□□□ 0.86
EXTL3-201ENST00000220562 MRPL50Q8N5N7 158 aaKnown RBP20.42■□□□□ 0.86
EXTL3-201ENST00000220562 EHBP1Q8NDI1 1231 aa20.42■□□□□ 0.86
EXTL3-201ENST00000220562 TBC1D5Q92609 795 aa20.42■□□□□ 0.86
EXTL3-201ENST00000220562 CAVIN2O95810 425 aa20.42■□□□□ 0.86
EXTL3-201ENST00000220562 IFI16Q16666 785 aaKnown RBP20.42■□□□□ 0.86
EXTL3-201ENST00000220562 CCDC171Q6TFL3 1326 aa20.41■□□□□ 0.86
EXTL3-201ENST00000220562 ASXL1Q8IXJ9 1541 aa20.41■□□□□ 0.86
EXTL3-201ENST00000220562 HSF2BPO75031 334 aa20.41■□□□□ 0.86
EXTL3-201ENST00000220562 KCNG4Q8TDN1 519 aa20.41■□□□□ 0.86
EXTL3-201ENST00000220562 CCDC174Q6PII3 467 aa20.41■□□□□ 0.86
EXTL3-201ENST00000220562 CNNM2Q9H8M5 875 aa20.41■□□□□ 0.86
EXTL3-201ENST00000220562 PAXIP1Q6ZW49 1069 aaPredicted RBP20.41■□□□□ 0.86
EXTL3-201ENST00000220562 CTAGE1Q96RT6 745 aa20.41■□□□□ 0.86
EXTL3-201ENST00000220562 IQSEC3Q9UPP2 1182 aaPredicted RBP20.41■□□□□ 0.86
EXTL3-201ENST00000220562 ZFYP08048 801 aaPredicted RBP20.41■□□□□ 0.86
EXTL3-201ENST00000220562 LMAN1P49257 510 aa20.41■□□□□ 0.86
EXTL3-201ENST00000220562 CALCOCO1Q9P1Z2 691 aa20.41■□□□□ 0.86
EXTL3-201ENST00000220562 GIGYF2Q6Y7W6 1299 aaKnown RBP20.4■□□□□ 0.86
EXTL3-201ENST00000220562 ERMNQ8TAM6 284 aa20.4■□□□□ 0.86
EXTL3-201ENST00000220562 FANCAO15360 1455 aa20.4■□□□□ 0.86
EXTL3-201ENST00000220562 FSD2A1L4K1 749 aa20.4■□□□□ 0.86
EXTL3-201ENST00000220562 NBPF7P0C2Y1 421 aaPredicted RBP20.4■□□□□ 0.86
EXTL3-201ENST00000220562 MARCKSP29966 332 aaPredicted RBP20.4■□□□□ 0.86
EXTL3-201ENST00000220562 ESR2Q92731 530 aa20.4■□□□□ 0.86
EXTL3-201ENST00000220562 PPM1FP49593 454 aaPredicted RBP20.4■□□□□ 0.86
EXTL3-201ENST00000220562 C16orf71Q8IYS4 520 aaPredicted RBP20.4■□□□□ 0.86
EXTL3-201ENST00000220562 COMMD10Q9Y6G5 202 aa20.4■□□□□ 0.86
EXTL3-201ENST00000220562 GRIN2AQ12879 1464 aa20.39■□□□□ 0.86
EXTL3-201ENST00000220562 NMIQ13287 307 aaPredicted RBP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms