RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 LRP6O75581 1613 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 ZKSCAN1P17029 563 aaPredicted RBP9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 IL15P40933 162 aaPredicted RBP9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 PHLPP1O60346 1717 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 EYA2O00167 538 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 GPTP24298 496 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 HLFQ16534 295 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 HAUS7Q99871 368 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 SNRKQ9NRH2 765 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 ZBTB1Q9Y2K1 713 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 MAP3K15Q6ZN16 1313 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 ZNF609O15014 1411 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 BRD1O95696 1058 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 PRIM1P49642 420 aaKnown RBP9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 COL9A3Q14050 684 aaPredicted RBP9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 KCNB2Q92953 911 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 LMBRD1Q9NUN5 540 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 LIMCH1Q9UPQ0 1083 aa9.59□□□□□ -0.87
HMGXB4-201ENST00000216106 SLC27A2O14975 620 aa9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 LARGE1O95461 756 aa9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 CYP19A1P11511 503 aaPredicted RBP9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 CCDC57Q2TAC2 916 aa9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 KLHL40Q2TBA0 621 aa9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 SYNE4Q8N205 404 aa9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 SEC62Q99442 399 aaKnown RBP9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 ZSWIM6Q9HCJ5 1215 aa9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 PDRG1Q9NUG6 133 aa9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 CYP46A1Q9Y6A2 500 aa9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 XRCC6P12956 609 aaKnown RBP eCLIP9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 CCDC129Q6ZRS4 1044 aa9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 TAF6LQ9Y6J9 622 aa9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 NRAPQ86VF7 1730 aa9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 A0A1B0GUL7 405 aa9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 PRPF40AO75400 957 aaKnown RBP9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 GIGYF2Q6Y7W6 1299 aaKnown RBP9.58□□□□□ -0.88
HMGXB4-201ENST00000216106 ANKRD36CQ5JPF3 1778 aa9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 LTBP4Q8N2S1 1624 aa9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 GOLIM4O00461 696 aa9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 DTNBO60941 627 aa9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 PCCAP05165 728 aaPredicted RBP9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 NCLP19338 710 aaKnown RBP9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 TRIM28Q13263 835 aaKnown RBP9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 FOXD4L6Q3SYB3 417 aaPredicted RBP9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 VPS53Q5VIR6 699 aa9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 FOXD4L3Q6VB84 417 aaPredicted RBP9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 ZBTB38Q8NAP3 1195 aaPredicted RBP9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 TM6SF1Q9BZW5 370 aa9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 RPAP1Q9BWH6 1393 aaPredicted RBP9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 JCADQ9P266 1359 aa9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 NUTM2BA6NNL0 878 aaPredicted RBP9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 NUTM2EB1AL46 878 aaPredicted RBP9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 TAF5LO75529 589 aa9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 NUTM2AQ8IVF1 878 aaPredicted RBP9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 PANK2Q9BZ23 570 aa9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 NUP98P52948 1817 aa9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 CIAO1O76071 339 aa9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 SLFNL1Q499Z3 407 aa9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 TCEANC2Q96MN5 208 aa9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 GPR108Q9NPR9 543 aa9.57□□□□□ -0.88
HMGXB4-201ENST00000216106 TAF7LQ5H9L4 462 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 RNF20Q5VTR2 975 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 GAS2L3Q86XJ1 694 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 CCDC83Q8IWF9 413 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 KBTBD3Q8NAB2 608 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 ACSBG1Q96GR2 724 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 PAG1Q9NWQ8 432 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 SPATA31A1Q5TZJ5 1347 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 MYH3P11055 1940 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 RFX7Q2KHR2 1363 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 DDB1Q16531 1140 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 NLRP10Q86W26 655 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 TBC1D2BQ9UPU7 963 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 CAVIN1Q6NZI2 390 aaKnown RBP9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 CEP126Q9P2H0 1117 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 TCHHQ07283 1943 aa9.56□□□□□ -0.88
HMGXB4-201ENST00000216106 IFIT1P09914 478 aaKnown RBP9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 IFIT5Q13325 482 aaKnown RBP9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 GRPEL1Q9HAV7 217 aa9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 PSMA5P28066 241 aa9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 MCMDC2Q4G0Z9 681 aa9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 GPT2Q8TD30 523 aa9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 PLA2G12BQ9BX93 195 aa9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 SMC3Q9UQE7 1217 aa9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 PALLDQ8WX93 1383 aa9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 ADORA1P30542 326 aa9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 MRE11P49959 708 aa9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 PIP4K2BP78356 416 aa9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 ME3Q16798 604 aa9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 BLOC1S2Q6QNY1 142 aa9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 DZIP3Q86Y13 1208 aaKnown RBP9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 WDR33Q9C0J8 1336 aaKnown RBP9.55□□□□□ -0.88
HMGXB4-201ENST00000216106 CSF1RP07333 972 aa9.54□□□□□ -0.88
HMGXB4-201ENST00000216106 HSP90AB3PQ58FF7 597 aa9.54□□□□□ -0.88
HMGXB4-201ENST00000216106 NECAB1Q8N987 351 aa9.54□□□□□ -0.88
HMGXB4-201ENST00000216106 GREM2Q9H772 168 aa9.54□□□□□ -0.88
HMGXB4-201ENST00000216106 TPCN1Q9ULQ1 816 aa9.54□□□□□ -0.88
HMGXB4-201ENST00000216106 ST3GAL1Q11201 340 aa9.54□□□□□ -0.88
HMGXB4-201ENST00000216106 HMG20BQ9P0W2 317 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms