RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 ANO3Q9BYT9 981 aa20.5■□□□□ 0.87
CDK13-201ENST00000181839 SBNO2Q9Y2G9 1366 aa20.5■□□□□ 0.87
CDK13-201ENST00000181839 PPP2R5DQ14738 602 aa20.5■□□□□ 0.87
CDK13-201ENST00000181839 PTPN14Q15678 1187 aa20.5■□□□□ 0.87
CDK13-201ENST00000181839 ANO10Q9NW15 660 aa20.5■□□□□ 0.87
CDK13-201ENST00000181839 BRPF3Q9ULD4 1205 aa20.5■□□□□ 0.87
CDK13-201ENST00000181839 ANXA1P04083 346 aa20.5■□□□□ 0.87
CDK13-201ENST00000181839 HYPKQ9NX55 129 aa20.5■□□□□ 0.87
CDK13-201ENST00000181839 SMIM23A6NLE4 172 aa20.49■□□□□ 0.87
CDK13-201ENST00000181839 TOM1O60784 492 aa20.49■□□□□ 0.87
CDK13-201ENST00000181839 AMOTQ4VCS5 1084 aa20.49■□□□□ 0.87
CDK13-201ENST00000181839 MAK16Q9BXY0 300 aaKnown RBP20.49■□□□□ 0.87
CDK13-201ENST00000181839 CLIP2Q9UDT6 1046 aa20.49■□□□□ 0.87
CDK13-201ENST00000181839 MYCP01106 439 aaPredicted RBP20.49■□□□□ 0.87
CDK13-201ENST00000181839 NSD3Q9BZ95 1437 aa20.49■□□□□ 0.87
CDK13-201ENST00000181839 PTGS1P23219 599 aa20.49■□□□□ 0.87
CDK13-201ENST00000181839 IARSP41252 1262 aaKnown RBP20.49■□□□□ 0.87
CDK13-201ENST00000181839 PHF8Q9UPP1 1060 aa20.49■□□□□ 0.87
CDK13-201ENST00000181839 NAPAP54920 295 aa20.49■□□□□ 0.87
CDK13-201ENST00000181839 FNBP4Q8N3X1 1017 aaPredicted RBP20.49■□□□□ 0.87
CDK13-201ENST00000181839 PICK1Q9NRD5 415 aa20.49■□□□□ 0.87
CDK13-201ENST00000181839 ANKRD30BQ9BXX2 1392 aa20.48■□□□□ 0.87
CDK13-201ENST00000181839 IRX5P78411 483 aaPredicted RBP20.48■□□□□ 0.87
CDK13-201ENST00000181839 CTR9Q6PD62 1173 aa20.48■□□□□ 0.87
CDK13-201ENST00000181839 ZNF804AQ7Z570 1209 aa20.48■□□□□ 0.87
CDK13-201ENST00000181839 ERMNQ8TAM6 284 aa20.48■□□□□ 0.87
CDK13-201ENST00000181839 KRT9P35527 623 aa20.48■□□□□ 0.87
CDK13-201ENST00000181839 LRRC2Q9BYS8 371 aa20.48■□□□□ 0.87
CDK13-201ENST00000181839 CUX1P39880 1505 aa20.48■□□□□ 0.87
CDK13-201ENST00000181839 UIMC1Q96RL1 719 aa20.48■□□□□ 0.87
CDK13-201ENST00000181839 SPDYE3A6NKU9 549 aa20.48■□□□□ 0.87
CDK13-201ENST00000181839 ZSCAN12O43309 604 aa20.48■□□□□ 0.87
CDK13-201ENST00000181839 GPR162Q16538 588 aa20.47■□□□□ 0.87
CDK13-201ENST00000181839 KRT5P13647 590 aa20.47■□□□□ 0.87
CDK13-201ENST00000181839 PLIN2Q99541 437 aa20.47■□□□□ 0.87
CDK13-201ENST00000181839 CFAP57Q96MR6 1250 aa20.47■□□□□ 0.87
CDK13-201ENST00000181839 DMRT2Q9Y5R5 561 aa20.47■□□□□ 0.87
CDK13-201ENST00000181839 TMPOP42166 694 aaKnown RBP20.47■□□□□ 0.87
CDK13-201ENST00000181839 TRIM6Q9C030 488 aaPredicted RBP20.47■□□□□ 0.87
CDK13-201ENST00000181839 ZC3H12CQ9C0D7 883 aaKnown RBP20.47■□□□□ 0.87
CDK13-201ENST00000181839 NSFL1CQ9UNZ2 370 aaKnown RBP20.47■□□□□ 0.87
CDK13-201ENST00000181839 SYNJ2O15056 1496 aa20.47■□□□□ 0.87
CDK13-201ENST00000181839 GRPEL1Q9HAV7 217 aa20.46■□□□□ 0.87
CDK13-201ENST00000181839 CEP83Q9Y592 693 aa20.46■□□□□ 0.87
CDK13-201ENST00000181839 FAM170AA1A519 330 aa20.46■□□□□ 0.87
CDK13-201ENST00000181839 AAMPQ13685 434 aa20.46■□□□□ 0.87
CDK13-201ENST00000181839 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.46■□□□□ 0.87
CDK13-201ENST00000181839 RUSC2Q8N2Y8 1516 aa20.46■□□□□ 0.87
CDK13-201ENST00000181839 LRPPRCP42704 1394 aaKnown RBP20.46■□□□□ 0.87
CDK13-201ENST00000181839 DNAAF4Q8WXU2 420 aa20.46■□□□□ 0.87
CDK13-201ENST00000181839 WTAPQ15007 396 aa20.46■□□□□ 0.87
CDK13-201ENST00000181839 ANKRD24Q8TF21 1146 aa20.46■□□□□ 0.87
CDK13-201ENST00000181839 GTF3C6Q969F1 213 aa20.46■□□□□ 0.87
CDK13-201ENST00000181839 FAM114A1Q8IWE2 563 aa20.46■□□□□ 0.87
CDK13-201ENST00000181839 GDPD2Q9HCC8 539 aa20.46■□□□□ 0.87
CDK13-201ENST00000181839 SATB1Q01826 763 aa20.45■□□□□ 0.86
CDK13-201ENST00000181839 NAA15Q9BXJ9 866 aaKnown RBP20.45■□□□□ 0.86
CDK13-201ENST00000181839 TXNDC16Q9P2K2 825 aa20.45■□□□□ 0.86
CDK13-201ENST00000181839 PPP1R21Q6ZMI0 780 aa20.45■□□□□ 0.86
CDK13-201ENST00000181839 NLRP3Q96P20 1036 aa20.45■□□□□ 0.86
CDK13-201ENST00000181839 PRDM10Q9NQV6 1147 aa20.45■□□□□ 0.86
CDK13-201ENST00000181839 MAEAQ7L5Y9 396 aa20.45■□□□□ 0.86
CDK13-201ENST00000181839 C6orf163Q5TEZ5 329 aa20.45■□□□□ 0.86
CDK13-201ENST00000181839 CCT6BQ92526 530 aa20.45■□□□□ 0.86
CDK13-201ENST00000181839 CABLES1Q8TDN4 633 aa20.45■□□□□ 0.86
CDK13-201ENST00000181839 TMOD4Q9NZQ9 345 aa20.45■□□□□ 0.86
CDK13-201ENST00000181839 FGD5Q6ZNL6 1462 aa20.44■□□□□ 0.86
CDK13-201ENST00000181839 TTC36A6NLP5 189 aa20.44■□□□□ 0.86
CDK13-201ENST00000181839 SORBS3O60504 671 aa20.44■□□□□ 0.86
CDK13-201ENST00000181839 C6orf50Q9HD87 102 aa20.44■□□□□ 0.86
CDK13-201ENST00000181839 ZBTB24O43167 697 aaPredicted RBP20.44■□□□□ 0.86
CDK13-201ENST00000181839 GAS8O95995 478 aa20.44■□□□□ 0.86
CDK13-201ENST00000181839 TOP2AP11388 1531 aaKnown RBP20.44■□□□□ 0.86
CDK13-201ENST00000181839 NAA16Q6N069 864 aaPredicted RBP20.44■□□□□ 0.86
CDK13-201ENST00000181839 RTCBQ9Y3I0 505 aaKnown RBP20.44■□□□□ 0.86
CDK13-201ENST00000181839 RRAGBQ5VZM2 374 aa20.44■□□□□ 0.86
CDK13-201ENST00000181839 CCDC61Q9Y6R9 512 aa20.44■□□□□ 0.86
CDK13-201ENST00000181839 FAM169AQ9Y6X4 670 aa20.44■□□□□ 0.86
CDK13-201ENST00000181839 B4DLN1 442 aa20.43■□□□□ 0.86
CDK13-201ENST00000181839 CHMP2AO43633 222 aa20.43■□□□□ 0.86
CDK13-201ENST00000181839 HMGB1P09429 215 aaKnown RBP20.43■□□□□ 0.86
CDK13-201ENST00000181839 MRPL12P52815 198 aaKnown RBP20.43■□□□□ 0.86
CDK13-201ENST00000181839 UAP1Q16222 522 aaPredicted RBP20.43■□□□□ 0.86
CDK13-201ENST00000181839 FBF1Q8TES7 1133 aa20.43■□□□□ 0.86
CDK13-201ENST00000181839 AKNAQ7Z591 1439 aa20.43■□□□□ 0.86
CDK13-201ENST00000181839 ABL1P00519 1130 aa20.43■□□□□ 0.86
CDK13-201ENST00000181839 CNGA1P29973 690 aa20.43■□□□□ 0.86
CDK13-201ENST00000181839 MTERF4Q7Z6M4 381 aaKnown RBP20.43■□□□□ 0.86
CDK13-201ENST00000181839 MIGA1Q8NAN2 632 aa20.43■□□□□ 0.86
CDK13-201ENST00000181839 CCDC114Q96M63 670 aa20.43■□□□□ 0.86
CDK13-201ENST00000181839 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.43■□□□□ 0.86
CDK13-201ENST00000181839 EIF6P56537 245 aaKnown RBP20.43■□□□□ 0.86
CDK13-201ENST00000181839 CUL4BQ13620 913 aa20.43■□□□□ 0.86
CDK13-201ENST00000181839 PPANQ9NQ55 473 aaKnown RBP20.43■□□□□ 0.86
CDK13-201ENST00000181839 BRD4O60885 1362 aaPredicted RBP20.43■□□□□ 0.86
CDK13-201ENST00000181839 ERCC5P28715 1186 aaPredicted RBP20.42■□□□□ 0.86
CDK13-201ENST00000181839 GJB2P29033 226 aa20.42■□□□□ 0.86
CDK13-201ENST00000181839 TTLL3Q9Y4R7 772 aa20.42■□□□□ 0.86
CDK13-201ENST00000181839 DDX39AO00148 427 aaKnown RBP20.42■□□□□ 0.86
CDK13-201ENST00000181839 TTC12Q9H892 705 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms