RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 GPTP24298 496 aa17.34■□□□□ 0.37
RTFDC1-201ENST00000023939 DBNDD2Q9BQY9 259 aa17.34■□□□□ 0.37
RTFDC1-201ENST00000023939 BOLA2Q9H3K6 86 aa17.34■□□□□ 0.37
RTFDC1-201ENST00000023939 UBN2Q6ZU65 1347 aa17.33■□□□□ 0.37
RTFDC1-201ENST00000023939 CAMTA2O94983 1202 aa17.33■□□□□ 0.37
RTFDC1-201ENST00000023939 MCM2P49736 904 aa17.33■□□□□ 0.37
RTFDC1-201ENST00000023939 CTSWP56202 376 aa17.33■□□□□ 0.37
RTFDC1-201ENST00000023939 IFIT5Q13325 482 aaKnown RBP17.33■□□□□ 0.37
RTFDC1-201ENST00000023939 CWC27Q6UX04 472 aaKnown RBP17.33■□□□□ 0.37
RTFDC1-201ENST00000023939 KIAA1211Q6ZU35 1233 aa17.33■□□□□ 0.37
RTFDC1-201ENST00000023939 TTLL11Q8NHH1 800 aa17.33■□□□□ 0.37
RTFDC1-201ENST00000023939 HAUS7Q99871 368 aa17.33■□□□□ 0.37
RTFDC1-201ENST00000023939 PDE8AO60658 829 aa17.33■□□□□ 0.36
RTFDC1-201ENST00000023939 LRRC24Q50LG9 513 aa17.33■□□□□ 0.36
RTFDC1-201ENST00000023939 PARP10Q53GL7 1025 aa17.33■□□□□ 0.36
RTFDC1-201ENST00000023939 TRMT112Q9UI30 125 aaKnown RBP17.33■□□□□ 0.36
RTFDC1-201ENST00000023939 PALD1Q9ULE6 856 aa17.33■□□□□ 0.36
RTFDC1-201ENST00000023939 CNTNAP4Q9C0A0 1308 aa17.32■□□□□ 0.36
RTFDC1-201ENST00000023939 A0A0G2JS52 829 aa17.32■□□□□ 0.36
RTFDC1-201ENST00000023939 IRS4O14654 1257 aaPredicted RBP17.32■□□□□ 0.36
RTFDC1-201ENST00000023939 ONECUT3O60422 494 aaPredicted RBP17.32■□□□□ 0.36
RTFDC1-201ENST00000023939 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.32■□□□□ 0.36
RTFDC1-201ENST00000023939 KCNB2Q92953 911 aa17.32■□□□□ 0.36
RTFDC1-201ENST00000023939 ZNF594Q96JF6 807 aaPredicted RBP17.32■□□□□ 0.36
RTFDC1-201ENST00000023939 CEP126Q9P2H0 1117 aa17.32■□□□□ 0.36
RTFDC1-201ENST00000023939 MYH14Q7Z406 1995 aaKnown RBP17.32■□□□□ 0.36
RTFDC1-201ENST00000023939 NHSQ6T4R5 1651 aa17.31■□□□□ 0.36
RTFDC1-201ENST00000023939 SPRYD3Q8NCJ5 442 aa17.31■□□□□ 0.36
RTFDC1-201ENST00000023939 GJD4Q96KN9 370 aaPredicted RBP17.31■□□□□ 0.36
RTFDC1-201ENST00000023939 FSD1Q9BTV5 496 aa17.31■□□□□ 0.36
RTFDC1-201ENST00000023939 PUS3Q9BZE2 481 aaKnown RBP17.31■□□□□ 0.36
RTFDC1-201ENST00000023939 AKAP2Q9Y2D5 859 aa17.31■□□□□ 0.36
RTFDC1-201ENST00000023939 HSPA1LP34931 641 aa17.3■□□□□ 0.36
RTFDC1-201ENST00000023939 ATRNO75882 1429 aa17.3■□□□□ 0.36
RTFDC1-201ENST00000023939 MED23Q9ULK4 1368 aa17.3■□□□□ 0.36
RTFDC1-201ENST00000023939 RC3H1Q5TC82 1133 aaKnown RBP17.3■□□□□ 0.36
RTFDC1-201ENST00000023939 CLEC4GQ6UXB4 293 aa17.3■□□□□ 0.36
RTFDC1-201ENST00000023939 SYNE4Q8N205 404 aa17.3■□□□□ 0.36
RTFDC1-201ENST00000023939 MYH3P11055 1940 aa17.29■□□□□ 0.36
RTFDC1-201ENST00000023939 SH3TC1Q8TE82 1336 aa17.29■□□□□ 0.36
RTFDC1-201ENST00000023939 ANKRD18BA2A2Z9 1011 aa17.29■□□□□ 0.36
RTFDC1-201ENST00000023939 HSP90B1P14625 803 aaKnown RBP17.29■□□□□ 0.36
RTFDC1-201ENST00000023939 NMIQ13287 307 aaPredicted RBP17.29■□□□□ 0.36
RTFDC1-201ENST00000023939 UTP14AQ9BVJ6 771 aaKnown RBP17.29■□□□□ 0.36
RTFDC1-201ENST00000023939 RIPOR2Q9Y4F9 1068 aa17.29■□□□□ 0.36
RTFDC1-201ENST00000023939 LRP5O75197 1615 aa17.29■□□□□ 0.36
RTFDC1-201ENST00000023939 SPEF2Q9C093 1822 aa17.28■□□□□ 0.36
RTFDC1-201ENST00000023939 CCDC171Q6TFL3 1326 aa17.28■□□□□ 0.36
RTFDC1-201ENST00000023939 BCORQ6W2J9 1755 aa17.28■□□□□ 0.36
RTFDC1-201ENST00000023939 A0A1B0GUL7 405 aa17.28■□□□□ 0.36
RTFDC1-201ENST00000023939 FRAT2O75474 233 aaPredicted RBP17.28■□□□□ 0.36
RTFDC1-201ENST00000023939 HSP90AA1P07900 732 aaKnown RBP17.28■□□□□ 0.36
RTFDC1-201ENST00000023939 ITGA6P23229 1130 aa17.28■□□□□ 0.36
RTFDC1-201ENST00000023939 NEK4P51957 841 aa17.28■□□□□ 0.36
RTFDC1-201ENST00000023939 TAF7LQ5H9L4 462 aa17.28■□□□□ 0.36
RTFDC1-201ENST00000023939 MEX3CQ5U5Q3 659 aaKnown RBP17.28■□□□□ 0.36
RTFDC1-201ENST00000023939 SUSD4Q5VX71 490 aa17.28■□□□□ 0.36
RTFDC1-201ENST00000023939 LINC00116Q8NCU8 138 aa17.28■□□□□ 0.36
RTFDC1-201ENST00000023939 GREM2Q9H772 168 aa17.28■□□□□ 0.36
RTFDC1-201ENST00000023939 ZNF652Q9Y2D9 606 aa17.28■□□□□ 0.36
RTFDC1-201ENST00000023939 RIC1Q4ADV7 1423 aa17.27■□□□□ 0.36
RTFDC1-201ENST00000023939 TIMM10P62072 90 aa17.27■□□□□ 0.36
RTFDC1-201ENST00000023939 MAP4K1Q92918 833 aa17.27■□□□□ 0.36
RTFDC1-201ENST00000023939 FAM227BQ96M60 508 aa17.27■□□□□ 0.36
RTFDC1-201ENST00000023939 NEUROD6Q96NK8 337 aa17.27■□□□□ 0.36
RTFDC1-201ENST00000023939 SNX14Q9Y5W7 946 aa17.27■□□□□ 0.36
RTFDC1-201ENST00000023939 RTL9Q8NET4 1388 aa17.27■□□□□ 0.36
RTFDC1-201ENST00000023939 ABCC12Q96J65 1359 aa17.27■□□□□ 0.36
RTFDC1-201ENST00000023939 AFF2P51816 1311 aa17.27■□□□□ 0.36
RTFDC1-201ENST00000023939 KBTBD3Q8NAB2 608 aa17.27■□□□□ 0.35
RTFDC1-201ENST00000023939 CWC22Q9HCG8 908 aaKnown RBP17.27■□□□□ 0.35
RTFDC1-201ENST00000023939 TRPC5Q9UL62 973 aaPredicted RBP17.27■□□□□ 0.35
RTFDC1-201ENST00000023939 BTAF1O14981 1849 aa17.26■□□□□ 0.35
RTFDC1-201ENST00000023939 A0A0D9SFI3 127 aa17.26■□□□□ 0.35
RTFDC1-201ENST00000023939 PTH1RQ03431 593 aa17.26■□□□□ 0.35
RTFDC1-201ENST00000023939 NECTIN1Q15223 517 aa17.26■□□□□ 0.35
RTFDC1-201ENST00000023939 TM6SF1Q9BZW5 370 aa17.26■□□□□ 0.35
RTFDC1-201ENST00000023939 NTSR2O95665 410 aa17.25■□□□□ 0.35
RTFDC1-201ENST00000023939 RAB3GAP1Q15042 981 aa17.25■□□□□ 0.35
RTFDC1-201ENST00000023939 LDHAL6AQ6ZMR3 332 aa17.25■□□□□ 0.35
RTFDC1-201ENST00000023939 LAMB2P55268 1798 aa17.24■□□□□ 0.35
RTFDC1-201ENST00000023939 VGLL2Q8N8G2 317 aa17.24■□□□□ 0.35
RTFDC1-201ENST00000023939 EDC3Q96F86 508 aaKnown RBP17.24■□□□□ 0.35
RTFDC1-201ENST00000023939 PAG1Q9NWQ8 432 aa17.24■□□□□ 0.35
RTFDC1-201ENST00000023939 CUL4AQ13619 759 aa17.24■□□□□ 0.35
RTFDC1-201ENST00000023939 CCDC158Q5M9N0 1113 aa17.24■□□□□ 0.35
RTFDC1-201ENST00000023939 RASEFQ8IZ41 740 aa17.24■□□□□ 0.35
RTFDC1-201ENST00000023939 XAGE2Q96GT9 111 aa17.24■□□□□ 0.35
RTFDC1-201ENST00000023939 ZNF512BQ96KM6 892 aaPredicted RBP17.24■□□□□ 0.35
RTFDC1-201ENST00000023939 CCDC85AQ96PX6 553 aaPredicted RBP17.24■□□□□ 0.35
RTFDC1-201ENST00000023939 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
RTFDC1-201ENST00000023939 NIP7Q9Y221 180 aaKnown RBP eCLIP17.24■□□□□ 0.35
RTFDC1-201ENST00000023939 RPS6KA4O75676 772 aa17.23■□□□□ 0.35
RTFDC1-201ENST00000023939 IFIT1P09914 478 aaKnown RBP17.23■□□□□ 0.35
RTFDC1-201ENST00000023939 METTL24Q5JXM2 366 aa17.23■□□□□ 0.35
RTFDC1-201ENST00000023939 PTF1AQ7RTS3 328 aa17.23■□□□□ 0.35
RTFDC1-201ENST00000023939 TMX3Q96JJ7 454 aa17.23■□□□□ 0.35
RTFDC1-201ENST00000023939 SCN7AQ01118 1682 aa17.23■□□□□ 0.35
RTFDC1-201ENST00000023939 TAF5LO75529 589 aa17.22■□□□□ 0.35
RTFDC1-201ENST00000023939 ATP2B3Q16720 1220 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms