RNA–Protein interactions for RNA: ENSMUST00000110302.7

Clcn3-205, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

TSL 5 BASIC

Gene Clcn3, Length 3,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-205ENSMUST00000110302 Trip6Q9Z1Y4 480 aa10.22□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Arhgap33Q80YF9 1305 aa10.22□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Slc4a1P04919 929 aa10.22□□□□□ -0.77
Clcn3-205ENSMUST00000110302 RubcnlQ3TD16 648 aa10.22□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Fbxo41Q6NS60 873 aa10.22□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Susd4Q8BH32 490 aa10.22□□□□□ -0.77
Clcn3-205ENSMUST00000110302 SnrkQ8VDU5 748 aa10.22□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Vwa3bJ9JI28 736 aa10.22□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Taok3Q8BYC6 898 aa10.22□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Zcrb1Q9CZ96 217 aaKnown RBP10.22□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Kcnq5Q9JK45 933 aa10.22□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Mlh1Q9JK91 760 aa10.22□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Ftl2P49945 183 aa10.21□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Plekhf1Q3TB82 279 aa10.21□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Slc38a10Q5I012 1090 aa10.21□□□□□ -0.77
Clcn3-205ENSMUST00000110302 GptQ8QZR5 496 aa10.21□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Ncoa5Q91W39 579 aaKnown RBP10.21□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Gm13023A2A8N2 498 aa10.21□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Ppfibp2O35711 882 aa10.21□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Tmem266Q8BZB3 538 aa10.21□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Il1rapl2Q9ERS6 686 aa10.21□□□□□ -0.77
Clcn3-205ENSMUST00000110302 Gpr182P43142 395 aa10.21□□□□□ -0.78
Clcn3-205ENSMUST00000110302 AnlnQ8K298 1121 aaKnown RBP10.21□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Rbbp8nlA2ABX0 614 aa10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Hsp90b1P08113 802 aaKnown RBP10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Gsdma2Q32M21 443 aa10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Ifit2Q64112 472 aa10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 BccipQ9CWI3 316 aa10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Npc1l1Q6T3U4 1333 aa10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 AppP12023 770 aa10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Ddit3P35639 168 aa10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Dmrt2Q8BG36 561 aa10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Rrs1Q9CYH6 365 aaKnown RBP10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Fbxl16A2RT62 479 aa10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 MccE9PWI3 1003 aa10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Igflr1Q3U4N7 345 aa10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Slf2Q6P9P0 1278 aa10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Top1mtQ8R4U6 593 aa10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Ttc14Q9CSP9 761 aa10.2□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Neurod6P48986 337 aa10.19□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Timm10P62073 90 aa10.19□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Vps54Q5SPW0 977 aa10.19□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Utp18Q5SSI6 552 aaKnown RBP10.19□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Smarcc1P97496 1104 aa10.19□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Ddx11Q6AXC6 880 aa10.19□□□□□ -0.78
Clcn3-205ENSMUST00000110302 StrbpQ91WM1 672 aaKnown RBP10.19□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Rdm1Q9CQK3 281 aa10.19□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Lrrc43Q3V0L5 667 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Itga6Q61739 1091 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Plcd4Q8K3R3 807 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Il17raQ60943 864 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Cyp7a1Q64505 503 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Pdzrn3Q69ZS0 1063 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Jakmip1Q8BVL9 626 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Tshz3Q8CGV9 1081 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Cyp2c23E9Q5K4 494 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Plbd2Q3TCN2 594 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Zkscan8Q8BSL0 588 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Mb21d2Q8C525 428 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Krt25Q8VCW2 446 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Trim34aQ99PP6 485 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Myh4Q5SX39 1939 aa10.18□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Myh13B1AR69 1938 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Bicdl1A0JNT9 577 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Cyp3a57D3YYZ0 503 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Trim34bJ3QNR8 485 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 TsksO54887 585 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Mdm2P23804 489 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Cyp2d10P24456 504 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Sgsm2Q80U12 1005 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Bin2D3Z6Q9 489 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Ift57Q8BXG3 429 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Ubn2Q80WC1 1314 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Togaram1Q6A070 1776 aaKnown RBP10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 1700006A11RikB9EHI3 544 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Nol10Q5RJG1 687 aaKnown RBP10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Ppp6r1Q7TSI3 856 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Htatsf1Q8BGC0 757 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Sp8Q8BMJ8 486 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Nek11Q8C0Q4 628 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Ak2Q9WTP6 239 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Ccne2Q9Z238 404 aa10.17□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Pde8bE9Q4S1 865 aa10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Sept1P42209 366 aa10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Rfx1P48377 963 aa10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 NpeppsQ11011 920 aa10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Ifit1bl2Q3U687 466 aa10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Rsph3aQ3UFY4 516 aa10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 StrcQ8VIM6 1809 aa10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Spata31d1bE9QA57 1361 aa10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Strn4P58404 760 aa10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Atp1b3P97370 278 aa10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Col4a5Q63ZW6 1691 aa10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Dctn1O08788 1281 aa10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Snrpa1P57784 255 aaKnown RBP10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Sf3b3Q921M3 1217 aaKnown RBP10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Ppp4r3bQ922R5 820 aa10.16□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Heg1E9Q7X6 1337 aa10.15□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Rbm8a2A0A0N4SUH6 174 aa10.15□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Rbm8aQ9CWZ3 174 aa10.15□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms