RNA–Protein interactions for RNA: ENSMUST00000056601.10

Vps53-201, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps53, Length 2,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-201ENSMUST00000056601 Plppr3Q7TPB0 716 aa17.03■□□□□ 0.32
Vps53-201ENSMUST00000056601 Lrrc8aQ80WG5 810 aa17.03■□□□□ 0.32
Vps53-201ENSMUST00000056601 Dnaaf2Q8BPI1 814 aa17.03■□□□□ 0.32
Vps53-201ENSMUST00000056601 Rhot2Q8JZN7 620 aa17.03■□□□□ 0.32
Vps53-201ENSMUST00000056601 Otud6bQ8K2H2 294 aa17.03■□□□□ 0.32
Vps53-201ENSMUST00000056601 Pcdhb15Q91Y04 786 aa17.03■□□□□ 0.32
Vps53-201ENSMUST00000056601 TrhQ62361 256 aa17.02■□□□□ 0.32
Vps53-201ENSMUST00000056601 StrbpQ91WM1 672 aaKnown RBP17.02■□□□□ 0.32
Vps53-201ENSMUST00000056601 Tubb6Q922F4 447 aa17.02■□□□□ 0.32
Vps53-201ENSMUST00000056601 PhaxQ9JJT9 385 aaKnown RBP17.02■□□□□ 0.32
Vps53-201ENSMUST00000056601 Frat1P70339 274 aa17.02■□□□□ 0.32
Vps53-201ENSMUST00000056601 Slu7Q8BHJ9 585 aa17.02■□□□□ 0.32
Vps53-201ENSMUST00000056601 Hnrnpul1Q8VDM6 859 aaKnown RBP17.02■□□□□ 0.32
Vps53-201ENSMUST00000056601 CenpqQ9CPQ5 267 aa17.02■□□□□ 0.32
Vps53-201ENSMUST00000056601 Ccdc155Q80VJ8 648 aa17.02■□□□□ 0.31
Vps53-201ENSMUST00000056601 Safb2Q80YR5 991 aaKnown RBP17.02■□□□□ 0.31
Vps53-201ENSMUST00000056601 Chd2E9PZM4 1827 aaKnown RBP17.01■□□□□ 0.31
Vps53-201ENSMUST00000056601 Tbc1d4Q8BYJ6 1307 aa17.01■□□□□ 0.31
Vps53-201ENSMUST00000056601 SympkQ80X82 1284 aa17.01■□□□□ 0.31
Vps53-201ENSMUST00000056601 Ano10Q8BH79 659 aa17.01■□□□□ 0.31
Vps53-201ENSMUST00000056601 TimelessQ9R1X4 1197 aa17.01■□□□□ 0.31
Vps53-201ENSMUST00000056601 Atp10bB1AWN4 1474 aa17.01■□□□□ 0.31
Vps53-201ENSMUST00000056601 Mst1rQ62190 1378 aa17.01■□□□□ 0.31
Vps53-201ENSMUST00000056601 Ube2oQ6ZPJ3 1288 aa17.01■□□□□ 0.31
Vps53-201ENSMUST00000056601 Nup153E9Q3G8 1462 aaKnown RBP17.01■□□□□ 0.31
Vps53-201ENSMUST00000056601 Flt4P35917 1363 aa17■□□□□ 0.31
Vps53-201ENSMUST00000056601 Stx1aO35526 288 aa17■□□□□ 0.31
Vps53-201ENSMUST00000056601 Clec11aO88200 328 aa17■□□□□ 0.31
Vps53-201ENSMUST00000056601 Kiaa0232Q80U59 1396 aaKnown RBP17■□□□□ 0.31
Vps53-201ENSMUST00000056601 Rbbp8nlA2ABX0 614 aa17■□□□□ 0.31
Vps53-201ENSMUST00000056601 HellsQ60848 821 aa17■□□□□ 0.31
Vps53-201ENSMUST00000056601 Ano8Q6PB70 1060 aa17■□□□□ 0.31
Vps53-201ENSMUST00000056601 Mtmr3Q8K296 1196 aa17■□□□□ 0.31
Vps53-201ENSMUST00000056601 Tmem94Q7TSH8 1360 aa17■□□□□ 0.31
Vps53-201ENSMUST00000056601 Mon2Q80TL7 1715 aa16.99■□□□□ 0.31
Vps53-201ENSMUST00000056601 Limch1Q3UH68 1057 aa16.99■□□□□ 0.31
Vps53-201ENSMUST00000056601 Ift57Q8BXG3 429 aa16.99■□□□□ 0.31
Vps53-201ENSMUST00000056601 Kcnk13Q8R1P5 405 aa16.99■□□□□ 0.31
Vps53-201ENSMUST00000056601 Tomm22Q9CPQ3 142 aa16.99■□□□□ 0.31
Vps53-201ENSMUST00000056601 4930548H24RikQ9D496 437 aa16.99■□□□□ 0.31
Vps53-201ENSMUST00000056601 Abcc12Q80WJ6 1366 aa16.99■□□□□ 0.31
Vps53-201ENSMUST00000056601 Zkscan4Q5SZT6 480 aa16.99■□□□□ 0.31
Vps53-201ENSMUST00000056601 Ccer1Q9CQL2 403 aa16.99■□□□□ 0.31
Vps53-201ENSMUST00000056601 Cct2P80314 535 aaKnown RBP16.98■□□□□ 0.31
Vps53-201ENSMUST00000056601 Atp1a3Q6PIC6 1013 aa16.98■□□□□ 0.31
Vps53-201ENSMUST00000056601 Gpatch3Q8BIY1 525 aa16.98■□□□□ 0.31
Vps53-201ENSMUST00000056601 Lrrfip2Q91WK0 415 aa16.98■□□□□ 0.31
Vps53-201ENSMUST00000056601 Zeb2Q9R0G7 1215 aa16.98■□□□□ 0.31
Vps53-201ENSMUST00000056601 Ccdc112A0AUP1 442 aa16.98■□□□□ 0.31
Vps53-201ENSMUST00000056601 Ms4a1P19437 291 aa16.98■□□□□ 0.31
Vps53-201ENSMUST00000056601 Pes1Q9EQ61 584 aaKnown RBP16.98■□□□□ 0.31
Vps53-201ENSMUST00000056601 D430041D05RikF6ZGR6 1678 aa16.97■□□□□ 0.31
Vps53-201ENSMUST00000056601 RubcnlQ3TD16 648 aa16.97■□□□□ 0.31
Vps53-201ENSMUST00000056601 Nek11Q8C0Q4 628 aa16.97■□□□□ 0.31
Vps53-201ENSMUST00000056601 Ddx41Q91VN6 622 aaKnown RBP16.97■□□□□ 0.31
Vps53-201ENSMUST00000056601 Atp2b1G5E829 1220 aa16.97■□□□□ 0.31
Vps53-201ENSMUST00000056601 Ddx46Q569Z5 1032 aaKnown RBP16.97■□□□□ 0.31
Vps53-201ENSMUST00000056601 Vps54Q5SPW0 977 aa16.97■□□□□ 0.31
Vps53-201ENSMUST00000056601 GpkowQ56A08 488 aa16.97■□□□□ 0.31
Vps53-201ENSMUST00000056601 DbnlQ62418 436 aa16.97■□□□□ 0.31
Vps53-201ENSMUST00000056601 Ccdc158Q8CDI6 1109 aa16.97■□□□□ 0.31
Vps53-201ENSMUST00000056601 Tmem119Q8R138 280 aa16.97■□□□□ 0.31
Vps53-201ENSMUST00000056601 Dnaaf4Q8R368 420 aa16.97■□□□□ 0.31
Vps53-201ENSMUST00000056601 Kdm6aO70546 1401 aa16.96■□□□□ 0.31
Vps53-201ENSMUST00000056601 Alpk3Q924C5 1678 aa16.96■□□□□ 0.31
Vps53-201ENSMUST00000056601 TrdnE9Q9K5 693 aa16.96■□□□□ 0.31
Vps53-201ENSMUST00000056601 Adora1Q60612 326 aa16.96■□□□□ 0.31
Vps53-201ENSMUST00000056601 Mrpl44Q9CY73 333 aaKnown RBP16.96■□□□□ 0.31
Vps53-201ENSMUST00000056601 Dusp10Q9ESS0 483 aa16.96■□□□□ 0.31
Vps53-201ENSMUST00000056601 Zkscan5Q9Z1D8 819 aa16.96■□□□□ 0.31
Vps53-201ENSMUST00000056601 Rrp1P56183 494 aaKnown RBP16.96■□□□□ 0.3
Vps53-201ENSMUST00000056601 Dnajc10Q9DC23 793 aa16.96■□□□□ 0.3
Vps53-201ENSMUST00000056601 Taf7Q9R1C0 341 aa16.96■□□□□ 0.3
Vps53-201ENSMUST00000056601 Prl7a2O54831 253 aa16.95■□□□□ 0.3
Vps53-201ENSMUST00000056601 AppP12023 770 aa16.95■□□□□ 0.3
Vps53-201ENSMUST00000056601 Hspa2P17156 633 aa16.95■□□□□ 0.3
Vps53-201ENSMUST00000056601 Tpm1P58771 284 aa16.95■□□□□ 0.3
Vps53-201ENSMUST00000056601 Dhx38Q80X98 1228 aa16.95■□□□□ 0.3
Vps53-201ENSMUST00000056601 Q8C5K5 320 aa16.95■□□□□ 0.3
Vps53-201ENSMUST00000056601 Aox2Q5SGK3 1345 aa16.95■□□□□ 0.3
Vps53-201ENSMUST00000056601 Igfbp6P47880 238 aa16.95■□□□□ 0.3
Vps53-201ENSMUST00000056601 Dhx40Q6PE54 779 aaKnown RBP16.95■□□□□ 0.3
Vps53-201ENSMUST00000056601 Golph3lQ8R088 285 aaKnown RBP16.95■□□□□ 0.3
Vps53-201ENSMUST00000056601 Tmem109Q3UBX0 243 aa16.94■□□□□ 0.3
Vps53-201ENSMUST00000056601 C5P06684 1680 aa16.94■□□□□ 0.3
Vps53-201ENSMUST00000056601 Sh3bp1P55194 680 aa16.94■□□□□ 0.3
Vps53-201ENSMUST00000056601 Cdca8Q8BHX3 289 aa16.94■□□□□ 0.3
Vps53-201ENSMUST00000056601 Q8BZJ8 459 aa16.94■□□□□ 0.3
Vps53-201ENSMUST00000056601 Fam114a1Q9D281 569 aa16.94■□□□□ 0.3
Vps53-201ENSMUST00000056601 MpndQ3TV65 487 aa16.93■□□□□ 0.3
Vps53-201ENSMUST00000056601 Fsd1Q7TPM6 496 aa16.93■□□□□ 0.3
Vps53-201ENSMUST00000056601 Nxf7Q80SZ6 620 aaKnown RBP16.93■□□□□ 0.3
Vps53-201ENSMUST00000056601 Snw1Q9CSN1 536 aaKnown RBP16.93■□□□□ 0.3
Vps53-201ENSMUST00000056601 Pus3Q9JI38 481 aa16.93■□□□□ 0.3
Vps53-201ENSMUST00000056601 L1td1Q587J6 782 aaKnown RBP16.93■□□□□ 0.3
Vps53-201ENSMUST00000056601 Pms1Q8K119 917 aa16.93■□□□□ 0.3
Vps53-201ENSMUST00000056601 Elf2Q9JHC9 593 aa16.93■□□□□ 0.3
Vps53-201ENSMUST00000056601 LratQ9JI60 231 aa16.93■□□□□ 0.3
Vps53-201ENSMUST00000056601 Ppp1r37Q8BKR5 712 aa16.92■□□□□ 0.3
Vps53-201ENSMUST00000056601 Als2Q920R0 1651 aa16.92■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms