RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Mxd3Q80US8 206 aa8.39□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Mrps5Q99N87 432 aaKnown RBP8.39□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Fam84aQ9D650 292 aa8.39□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Ankrd44B2RXR6 993 aa8.39□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Cfap70D3YVL2 1141 aa8.39□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Lmnb1P14733 588 aaKnown RBP8.39□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Ddx46Q569Z5 1032 aaKnown RBP8.39□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Gjd4Q8BSD4 364 aa8.39□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Pet2A2AHY8 747 aa8.39□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Abl1P00520 1123 aa8.39□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Prkg1P0C605 671 aa8.39□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Myoz2Q9JJW5 264 aa8.39□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Bin2D3Z6Q9 489 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 MecomP14404 1042 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Ppp1r21Q3TDD9 780 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Ripor2Q80U16 1078 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Tgfb2P27090 414 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 SowahdQ8BY98 327 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Chmp5Q9D7S9 219 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Abca15E9PWH4 1668 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Ptpn23Q6PB44 1692 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Atp6v0a2P15920 856 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Gpr182P43142 395 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Znf692Q3U381 531 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Washc4Q3UMB9 1173 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Ufl1Q8CCJ3 793 aaKnown RBP8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Ttc14Q9CSP9 761 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Stk32bQ9JJX8 414 aa8.38□□□□□ -1.07
Bdnf-201ENSMUST00000053317 AK157302I3ITR1 129 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Fam83bQ0VBM2 1012 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Isca1Q9D924 129 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Irs4Q9Z0Y7 1216 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Mapkapk5O54992 473 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Atp2b3Q0VF55 1220 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Gsdma2Q32M21 443 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Kiaa0753Q6A000 959 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Ptrh1Q8BW00 204 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 HlfQ8BW74 295 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Gtf2iQ9ESZ8 998 aaKnown RBP8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Eif6O55135 245 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Hmox1P14901 289 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Csrnp1P59054 583 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Mum1Q6DID5 682 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Atxn2lQ7TQH0 1049 aaKnown RBP8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Ubn2Q80WC1 1314 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 UtrnE9Q6R7 3430 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Zfyve9A2A8R0 1397 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Robo1O89026 1612 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Cavin2Q63918 418 aaKnown RBP8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Morc2aQ69ZX6 1030 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Cfap69Q8BH53 942 aa8.37□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Adcy9P51830 1353 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Speer4dL7N216 212 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 CrcpO35427 148 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Ier5O89113 308 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Ftl2P49945 183 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 4930504O13RikQ8C5Z9 145 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Tbc1d7Q9D0K0 293 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Eddm13E9Q7F5 164 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Rrp12Q6P5B0 1295 aaKnown RBP8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Fbxo2Q80UW2 297 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Dnai1Q8C0M8 701 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Slc51aQ8R000 340 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Tomm22Q9CPQ3 142 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Prl3d3A0A0M6L0J6 224 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Glt1d1A4FUP9 346 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Spon1Q8VCC9 807 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Pik3ap1Q9EQ32 811 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Fer1l6E0CZ42 1862 aa8.36□□□□□ -1.07
Bdnf-201ENSMUST00000053317 HellsQ60848 821 aa8.35□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Ppm1mQ8BU27 406 aa8.35□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Foxo4Q9WVH3 505 aa8.35□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Zbtb3Q91X45 518 aa8.35□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Ripk4Q9ERK0 786 aa8.35□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Sult6b1P0CC03 303 aa8.35□□□□□ -1.07
Bdnf-201ENSMUST00000053317 MsnP26041 577 aaKnown RBP8.35□□□□□ -1.07
Bdnf-201ENSMUST00000053317 EgfrQ01279 1210 aa8.35□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Map3k12Q60700 888 aa8.35□□□□□ -1.07
Bdnf-201ENSMUST00000053317 ErfeQ6PGN1 340 aa8.35□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Fam13aQ8BGI4 693 aa8.35□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Tmem87bQ8BKU8 555 aa8.35□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Mrpl12Q9DB15 201 aaKnown RBP8.35□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Il1rapl2Q9ERS6 686 aa8.35□□□□□ -1.07
Bdnf-201ENSMUST00000053317 GorabQ8BRM2 368 aa8.34□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Eya2O08575 532 aa8.34□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Csf1rP09581 977 aa8.34□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Ttll12Q3UDE2 639 aa8.34□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Fhdc1Q3ULZ2 1149 aa8.34□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Lmod1Q8BVA4 595 aa8.34□□□□□ -1.07
Bdnf-201ENSMUST00000053317 VgfQ0VGU4 617 aa8.34□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Psd3Q2PFD7 1037 aa8.34□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Dis3l2Q8CI75 870 aaKnown RBP8.34□□□□□ -1.07
Bdnf-201ENSMUST00000053317 FanclQ9CR14 375 aa8.34□□□□□ -1.07
Bdnf-201ENSMUST00000053317 Mdc1Q5PSV9 1707 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 AtrnQ9WU60 1428 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Prl3d2F6R3P9 224 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Npy5rO70342 466 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Prl7d1P04769 244 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 CalcaP70160 136 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Atp8b2P98199 1209 aa8.33□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms