RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 D430041D05RikF6ZGR6 1678 aa15.84■□□□□ 0.13
Nup88-201ENSMUST00000035283 Cfap58B2RW38 873 aa15.84■□□□□ 0.13
Nup88-201ENSMUST00000035283 Ube2oQ6ZPJ3 1288 aa15.84■□□□□ 0.13
Nup88-201ENSMUST00000035283 Tmem94Q7TSH8 1360 aa15.84■□□□□ 0.13
Nup88-201ENSMUST00000035283 Eif3aP23116 1344 aaKnown RBP15.83■□□□□ 0.13
Nup88-201ENSMUST00000035283 Mtx1P47802 317 aa15.83■□□□□ 0.12
Nup88-201ENSMUST00000035283 Neurod6P48986 337 aa15.83■□□□□ 0.12
Nup88-201ENSMUST00000035283 Plppr3Q7TPB0 716 aa15.83■□□□□ 0.12
Nup88-201ENSMUST00000035283 Dnaaf2Q8BPI1 814 aa15.83■□□□□ 0.12
Nup88-201ENSMUST00000035283 Aox2Q5SGK3 1345 aa15.83■□□□□ 0.12
Nup88-201ENSMUST00000035283 RubcnlQ3TD16 648 aa15.83■□□□□ 0.12
Nup88-201ENSMUST00000035283 Zfp397Q7TNK4 527 aa15.83■□□□□ 0.12
Nup88-201ENSMUST00000035283 C5P06684 1680 aa15.82■□□□□ 0.12
Nup88-201ENSMUST00000035283 HellsQ60848 821 aa15.82■□□□□ 0.12
Nup88-201ENSMUST00000035283 Ppp1r10Q80W00 888 aaKnown RBP15.82■□□□□ 0.12
Nup88-201ENSMUST00000035283 Lrrc8aQ80WG5 810 aa15.82■□□□□ 0.12
Nup88-201ENSMUST00000035283 Arap3Q8R5G7 1538 aa15.82■□□□□ 0.12
Nup88-201ENSMUST00000035283 Als2Q920R0 1651 aa15.82■□□□□ 0.12
Nup88-201ENSMUST00000035283 Ubn2Q80WC1 1314 aa15.82■□□□□ 0.12
Nup88-201ENSMUST00000035283 Tbc1d4Q8BYJ6 1307 aa15.82■□□□□ 0.12
Nup88-201ENSMUST00000035283 Abcc12Q80WJ6 1366 aa15.82■□□□□ 0.12
Nup88-201ENSMUST00000035283 DbnlQ62418 436 aa15.82■□□□□ 0.12
Nup88-201ENSMUST00000035283 Irgm2A0A140LIF8 407 aa15.81■□□□□ 0.12
Nup88-201ENSMUST00000035283 Adora1Q60612 326 aa15.81■□□□□ 0.12
Nup88-201ENSMUST00000035283 Cep135Q6P5D4 1140 aa15.81■□□□□ 0.12
Nup88-201ENSMUST00000035283 Dhx38Q80X98 1228 aa15.81■□□□□ 0.12
Nup88-201ENSMUST00000035283 Dnajc10Q9DC23 793 aa15.81■□□□□ 0.12
Nup88-201ENSMUST00000035283 Frat1P70339 274 aa15.8■□□□□ 0.12
Nup88-201ENSMUST00000035283 Vps54Q5SPW0 977 aa15.8■□□□□ 0.12
Nup88-201ENSMUST00000035283 Atp1a3Q6PIC6 1013 aa15.8■□□□□ 0.12
Nup88-201ENSMUST00000035283 Hook1Q8BIL5 728 aa15.8■□□□□ 0.12
Nup88-201ENSMUST00000035283 Ppp1r37Q8BKR5 712 aa15.8■□□□□ 0.12
Nup88-201ENSMUST00000035283 R3hcc1Q8BSI6 488 aa15.8■□□□□ 0.12
Nup88-201ENSMUST00000035283 Tmem119Q8R138 280 aa15.8■□□□□ 0.12
Nup88-201ENSMUST00000035283 Hmg20bQ9Z104 317 aa15.8■□□□□ 0.12
Nup88-201ENSMUST00000035283 Rbbp8nlA2ABX0 614 aa15.8■□□□□ 0.12
Nup88-201ENSMUST00000035283 Ttll7A4Q9F0 912 aa15.8■□□□□ 0.12
Nup88-201ENSMUST00000035283 Kcnk13Q8R1P5 405 aa15.8■□□□□ 0.12
Nup88-201ENSMUST00000035283 Lrrfip2Q91WK0 415 aa15.8■□□□□ 0.12
Nup88-201ENSMUST00000035283 Dusp10Q9ESS0 483 aa15.8■□□□□ 0.12
Nup88-201ENSMUST00000035283 Pus3Q9JI38 481 aa15.8■□□□□ 0.12
Nup88-201ENSMUST00000035283 Ppm1mQ8BU27 406 aa15.79■□□□□ 0.12
Nup88-201ENSMUST00000035283 Pdia6Q922R8 440 aaKnown RBP15.79■□□□□ 0.12
Nup88-201ENSMUST00000035283 BcorQ8CGN4 1759 aa15.79■□□□□ 0.12
Nup88-201ENSMUST00000035283 Ddx46Q569Z5 1032 aaKnown RBP15.79■□□□□ 0.12
Nup88-201ENSMUST00000035283 Golph3lQ8R088 285 aaKnown RBP15.79■□□□□ 0.12
Nup88-201ENSMUST00000035283 Snw1Q9CSN1 536 aaKnown RBP15.79■□□□□ 0.12
Nup88-201ENSMUST00000035283 Kdm6aO70546 1401 aa15.79■□□□□ 0.12
Nup88-201ENSMUST00000035283 Atp2b1G5E829 1220 aa15.78■□□□□ 0.12
Nup88-201ENSMUST00000035283 Prl7a2O54831 253 aa15.78■□□□□ 0.12
Nup88-201ENSMUST00000035283 Clec11aO88200 328 aa15.78■□□□□ 0.12
Nup88-201ENSMUST00000035283 Cct2P80314 535 aaKnown RBP15.78■□□□□ 0.12
Nup88-201ENSMUST00000035283 Tmem109Q3UBX0 243 aa15.78■□□□□ 0.12
Nup88-201ENSMUST00000035283 Taf3Q5HZG4 932 aa15.78■□□□□ 0.12
Nup88-201ENSMUST00000035283 Nlrp9bQ66X22 1003 aa15.78■□□□□ 0.12
Nup88-201ENSMUST00000035283 Rhot2Q8JZN7 620 aa15.78■□□□□ 0.12
Nup88-201ENSMUST00000035283 LratQ9JI60 231 aa15.78■□□□□ 0.12
Nup88-201ENSMUST00000035283 Dhx40Q6PE54 779 aaKnown RBP15.78■□□□□ 0.12
Nup88-201ENSMUST00000035283 Safb2Q80YR5 991 aaKnown RBP15.78■□□□□ 0.12
Nup88-201ENSMUST00000035283 Ano10Q8BH79 659 aa15.78■□□□□ 0.12
Nup88-201ENSMUST00000035283 Rassf8Q8CJ96 419 aa15.78■□□□□ 0.12
Nup88-201ENSMUST00000035283 Nxf7Q80SZ6 620 aaKnown RBP15.77■□□□□ 0.12
Nup88-201ENSMUST00000035283 Hnrnpul1Q8VDM6 859 aaKnown RBP15.77■□□□□ 0.12
Nup88-201ENSMUST00000035283 4930548H24RikQ9D496 437 aa15.77■□□□□ 0.12
Nup88-201ENSMUST00000035283 Taf7Q9R1C0 341 aa15.77■□□□□ 0.12
Nup88-201ENSMUST00000035283 Nid2O88322 1403 aa15.77■□□□□ 0.12
Nup88-201ENSMUST00000035283 NpeppsQ11011 920 aa15.77■□□□□ 0.11
Nup88-201ENSMUST00000035283 Limch1Q3UH68 1057 aa15.77■□□□□ 0.11
Nup88-201ENSMUST00000035283 GpkowQ56A08 488 aa15.77■□□□□ 0.11
Nup88-201ENSMUST00000035283 Slu7Q8BHJ9 585 aa15.77■□□□□ 0.11
Nup88-201ENSMUST00000035283 Fam43aQ8BUP8 424 aa15.77■□□□□ 0.11
Nup88-201ENSMUST00000035283 Nek11Q8C0Q4 628 aa15.77■□□□□ 0.11
Nup88-201ENSMUST00000035283 CenpqQ9CPQ5 267 aa15.77■□□□□ 0.11
Nup88-201ENSMUST00000035283 Stx1aO35526 288 aa15.76■□□□□ 0.11
Nup88-201ENSMUST00000035283 Ccdc158Q8CDI6 1109 aa15.76■□□□□ 0.11
Nup88-201ENSMUST00000035283 Mtmr3Q8K296 1196 aa15.76■□□□□ 0.11
Nup88-201ENSMUST00000035283 Ubxn4Q8VCH8 506 aa15.76■□□□□ 0.11
Nup88-201ENSMUST00000035283 Ddx41Q91VN6 622 aaKnown RBP15.76■□□□□ 0.11
Nup88-201ENSMUST00000035283 PhaxQ9JJT9 385 aaKnown RBP15.76■□□□□ 0.11
Nup88-201ENSMUST00000035283 Zeb2Q9R0G7 1215 aa15.76■□□□□ 0.11
Nup88-201ENSMUST00000035283 Sh3bp5Q9Z131 463 aa15.76■□□□□ 0.11
Nup88-201ENSMUST00000035283 Ccdc112A0AUP1 442 aa15.76■□□□□ 0.11
Nup88-201ENSMUST00000035283 Zkscan4Q5SZT6 480 aa15.76■□□□□ 0.11
Nup88-201ENSMUST00000035283 Dis3l2Q8CI75 870 aaKnown RBP15.76■□□□□ 0.11
Nup88-201ENSMUST00000035283 Otud6bQ8K2H2 294 aa15.76■□□□□ 0.11
Nup88-201ENSMUST00000035283 Tubb6Q922F4 447 aa15.76■□□□□ 0.11
Nup88-201ENSMUST00000035283 Ercc3P49135 783 aa15.75■□□□□ 0.11
Nup88-201ENSMUST00000035283 Smarcc2Q6PDG5 1213 aa15.75■□□□□ 0.11
Nup88-201ENSMUST00000035283 Mb21d2Q8C525 428 aa15.75■□□□□ 0.11
Nup88-201ENSMUST00000035283 TrdnE9Q9K5 693 aa15.75■□□□□ 0.11
Nup88-201ENSMUST00000035283 XpcP51612 930 aa15.75■□□□□ 0.11
Nup88-201ENSMUST00000035283 Ptcd1Q8C2E4 695 aaKnown RBP15.75■□□□□ 0.11
Nup88-201ENSMUST00000035283 Usp44Q8C2S0 711 aa15.75■□□□□ 0.11
Nup88-201ENSMUST00000035283 NmiO35309 314 aa15.74■□□□□ 0.11
Nup88-201ENSMUST00000035283 Surf1P09925 306 aa15.74■□□□□ 0.11
Nup88-201ENSMUST00000035283 MpndQ3TV65 487 aa15.74■□□□□ 0.11
Nup88-201ENSMUST00000035283 Mrpl44Q9CY73 333 aaKnown RBP15.74■□□□□ 0.11
Nup88-201ENSMUST00000035283 TimelessQ9R1X4 1197 aa15.74■□□□□ 0.11
Nup88-201ENSMUST00000035283 Rrp1P56183 494 aaKnown RBP15.74■□□□□ 0.11
Nup88-201ENSMUST00000035283 Ift57Q8BXG3 429 aa15.74■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 75.2 ms