RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Mrps27Q8BK72 415 aaKnown RBP12.7□□□□□ -0.38
Msh3-201ENSMUST00000022220 Rbm17Q8JZX4 405 aaKnown RBP12.7□□□□□ -0.38
Msh3-201ENSMUST00000022220 Rbm33Q9CXK9 1231 aaKnown RBP12.7□□□□□ -0.38
Msh3-201ENSMUST00000022220 Syde2E9PUP1 1314 aa12.7□□□□□ -0.38
Msh3-201ENSMUST00000022220 Cops6O88545 324 aa12.69□□□□□ -0.38
Msh3-201ENSMUST00000022220 MarsQ68FL6 902 aaKnown RBP12.69□□□□□ -0.38
Msh3-201ENSMUST00000022220 Gpatch3Q8BIY1 525 aa12.69□□□□□ -0.38
Msh3-201ENSMUST00000022220 Vps53Q8CCB4 832 aa12.69□□□□□ -0.38
Msh3-201ENSMUST00000022220 Kiaa0556Q8C753 1610 aa12.69□□□□□ -0.38
Msh3-201ENSMUST00000022220 Mctp1E9PV86 951 aa12.69□□□□□ -0.38
Msh3-201ENSMUST00000022220 Rbm26Q6NZN0 1012 aaKnown RBP12.69□□□□□ -0.38
Msh3-201ENSMUST00000022220 Otud6bQ8K2H2 294 aa12.69□□□□□ -0.38
Msh3-201ENSMUST00000022220 Cep57l1Q8VDS7 400 aa12.69□□□□□ -0.38
Msh3-201ENSMUST00000022220 TnmdQ9EP64 317 aa12.69□□□□□ -0.38
Msh3-201ENSMUST00000022220 Ercc6lQ8BHK9 1240 aa12.69□□□□□ -0.38
Msh3-201ENSMUST00000022220 Oas2E9Q9A9 742 aa12.69□□□□□ -0.38
Msh3-201ENSMUST00000022220 Ube2hP62257 183 aa12.69□□□□□ -0.38
Msh3-201ENSMUST00000022220 Pmfbp1Q9WVQ0 1022 aa12.69□□□□□ -0.38
Msh3-201ENSMUST00000022220 Xrn1P97789 1719 aaKnown RBP12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Gm12185Q5NCB2 835 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Znf771Q8BJ90 317 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Evc2Q8K1G2 1220 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Nup133Q8R0G9 1155 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Slc14a2Q8R4T9 930 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 LlphQ9D945 130 aaKnown RBP12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 PtpruB1AUH1 1446 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Fbln2P37889 1221 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Usp25P57080 1055 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Zdhhc9P59268 364 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Srek1Q8BZX4 494 aaKnown RBP12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Ccdc158Q8CDI6 1109 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 CenpqQ9CPQ5 267 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Ces1hD3Z298 562 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Ppp1r21Q3TDD9 780 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Tbc1d31Q6NXY1 996 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Bms1Q6PGF5 1284 aaKnown RBP12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 SrrtQ99MR6 875 aaKnown RBP12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Rai14Q9EP71 979 aaKnown RBP12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Sil1Q9EPK6 465 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Plekho1Q9JIY0 408 aa12.68□□□□□ -0.38
Msh3-201ENSMUST00000022220 Serpinb6bO08804 377 aa12.67□□□□□ -0.38
Msh3-201ENSMUST00000022220 IntuQ059U7 942 aa12.67□□□□□ -0.38
Msh3-201ENSMUST00000022220 Cep55Q8BT07 462 aa12.67□□□□□ -0.38
Msh3-201ENSMUST00000022220 Atf7Q8R0S1 413 aa12.67□□□□□ -0.38
Msh3-201ENSMUST00000022220 Cdc42bpgQ80UW5 1551 aa12.67□□□□□ -0.38
Msh3-201ENSMUST00000022220 Tsr2Q8C8T8 191 aa12.67□□□□□ -0.38
Msh3-201ENSMUST00000022220 ParvgQ9ERD8 331 aa12.67□□□□□ -0.38
Msh3-201ENSMUST00000022220 CltcQ68FD5 1675 aaKnown RBP12.67□□□□□ -0.38
Msh3-201ENSMUST00000022220 Zkscan8Q8BSL0 588 aa12.67□□□□□ -0.38
Msh3-201ENSMUST00000022220 EngaseQ8BX80 734 aa12.67□□□□□ -0.38
Msh3-201ENSMUST00000022220 Ncbp3Q8BZR9 615 aaKnown RBP12.67□□□□□ -0.38
Msh3-201ENSMUST00000022220 Krt84Q99M73 603 aa12.67□□□□□ -0.38
Msh3-201ENSMUST00000022220 ZwintQ9CQU5 252 aa12.67□□□□□ -0.38
Msh3-201ENSMUST00000022220 Stx6Q9JKK1 255 aa12.67□□□□□ -0.38
Msh3-201ENSMUST00000022220 Stk36Q69ZM6 1316 aa12.66□□□□□ -0.38
Msh3-201ENSMUST00000022220 Prl3d3A0A0M6L0J6 224 aa12.66□□□□□ -0.38
Msh3-201ENSMUST00000022220 Pla2g4fQ50L41 855 aa12.66□□□□□ -0.38
Msh3-201ENSMUST00000022220 Ifit2Q64112 472 aa12.66□□□□□ -0.38
Msh3-201ENSMUST00000022220 Ano8Q6PB70 1060 aa12.66□□□□□ -0.38
Msh3-201ENSMUST00000022220 Fez2Q6TYB5 348 aa12.66□□□□□ -0.38
Msh3-201ENSMUST00000022220 Ppp1r37Q8BKR5 712 aa12.66□□□□□ -0.38
Msh3-201ENSMUST00000022220 Esco1Q69Z69 843 aa12.66□□□□□ -0.38
Msh3-201ENSMUST00000022220 Pdzrn3Q69ZS0 1063 aa12.66□□□□□ -0.38
Msh3-201ENSMUST00000022220 Gimap8Q75N62 688 aa12.66□□□□□ -0.38
Msh3-201ENSMUST00000022220 Ak2Q9WTP6 239 aa12.66□□□□□ -0.38
Msh3-201ENSMUST00000022220 Kdm6aO70546 1401 aa12.66□□□□□ -0.38
Msh3-201ENSMUST00000022220 Eif2ak4Q9QZ05 1648 aa12.66□□□□□ -0.38
Msh3-201ENSMUST00000022220 Akap12Q9WTQ5 1684 aa12.65□□□□□ -0.38
Msh3-201ENSMUST00000022220 Card6E9PWH2 1175 aa12.65□□□□□ -0.38
Msh3-201ENSMUST00000022220 Sult6b1P0CC03 303 aa12.65□□□□□ -0.38
Msh3-201ENSMUST00000022220 Tpm1P58771 284 aa12.65□□□□□ -0.38
Msh3-201ENSMUST00000022220 Gas2l3Q3UWW6 683 aa12.65□□□□□ -0.38
Msh3-201ENSMUST00000022220 Sik1Q60670 779 aa12.65□□□□□ -0.38
Msh3-201ENSMUST00000022220 Ano6Q6P9J9 911 aa12.65□□□□□ -0.38
Msh3-201ENSMUST00000022220 Zfp397Q7TNK4 527 aa12.65□□□□□ -0.38
Msh3-201ENSMUST00000022220 Dcaf5Q80T85 946 aa12.65□□□□□ -0.38
Msh3-201ENSMUST00000022220 Rufy2Q8R4C2 606 aa12.65□□□□□ -0.38
Msh3-201ENSMUST00000022220 Lrrfip2Q91WK0 415 aa12.65□□□□□ -0.38
Msh3-201ENSMUST00000022220 Krt85Q9Z2T6 507 aa12.65□□□□□ -0.38
Msh3-201ENSMUST00000022220 ImmtQ8CAQ8 757 aaKnown RBP12.65□□□□□ -0.38
Msh3-201ENSMUST00000022220 Tmem2Q5FWI3 1383 aa12.65□□□□□ -0.38
Msh3-201ENSMUST00000022220 Speer4dL7N216 212 aa12.65□□□□□ -0.39
Msh3-201ENSMUST00000022220 Zfp51Q3U4L8 781 aa12.65□□□□□ -0.39
Msh3-201ENSMUST00000022220 Cep135Q6P5D4 1140 aa12.65□□□□□ -0.39
Msh3-201ENSMUST00000022220 Ppp6r1Q7TSI3 856 aa12.65□□□□□ -0.39
Msh3-201ENSMUST00000022220 Fam84aQ9D650 292 aa12.65□□□□□ -0.39
Msh3-201ENSMUST00000022220 Hdac6Q9Z2V5 1149 aa12.65□□□□□ -0.39
Msh3-201ENSMUST00000022220 AglF8VPN4 1532 aa12.65□□□□□ -0.39
Msh3-201ENSMUST00000022220 Dusp9Q7TNL7 452 aa12.64□□□□□ -0.39
Msh3-201ENSMUST00000022220 4930548H24RikQ9D496 437 aa12.64□□□□□ -0.39
Msh3-201ENSMUST00000022220 Mroh1E0CZ22 1640 aa12.64□□□□□ -0.39
Msh3-201ENSMUST00000022220 Gm7347D3YYI9 267 aa12.64□□□□□ -0.39
Msh3-201ENSMUST00000022220 Speer4aF8VPX6 267 aa12.64□□□□□ -0.39
Msh3-201ENSMUST00000022220 Ddx19aQ61655 478 aaKnown RBP12.64□□□□□ -0.39
Msh3-201ENSMUST00000022220 Rad17Q6NXW6 688 aa12.64□□□□□ -0.39
Msh3-201ENSMUST00000022220 Riok1Q922Q2 567 aa12.64□□□□□ -0.39
Msh3-201ENSMUST00000022220 Ccdc39Q9D5Y1 937 aa12.64□□□□□ -0.39
Msh3-201ENSMUST00000022220 Mx2Q9WVP9 655 aa12.64□□□□□ -0.39
Msh3-201ENSMUST00000022220 Eya2O08575 532 aa12.64□□□□□ -0.39
Msh3-201ENSMUST00000022220 Dnajc5P60904 198 aa12.63□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms