RNA–Protein interactions for RNA: ENST00000639809.1

SPIN3-229, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,118 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-229	ENST00000639809	ATP23	Q9Y6H3	246 aa		13.85	□□□□□ -0.19
SPIN3-229	ENST00000639809	LMX1B	O60663	402 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	BPGM	P07738	259 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	IGHV4-31	P0DP07	118 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	UQCRB	P14927	111 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	ARRB2	P32121	409 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	RYK	P34925	604 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	IDH2	P48735	452 aa	Known RBP	13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	PDLIM4	P50479	330 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	ANXA11	P50995	505 aa	Known RBP	13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	GNA13	Q14344	377 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	SLC17A1	Q14916	467 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	KLHL24	Q6TFL4	600 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	CCDC103	Q8IW40	242 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	POMGNT2	Q8NAT1	580 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	NEURL3	Q96EH8	262 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	SF3B5	Q9BWJ5	86 aa	Known RBP	13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	DPY30	Q9C005	99 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	MED4	Q9NPJ6	270 aa		13.84	□□□□□ -0.19
SPIN3-229	ENST00000639809	TMED7-TICAM2	A0A0A6YYA0	188 aa		13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	SCN2B	O60939	215 aa		13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	SLC1A3	P43003	542 aa		13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	CLNS1A	P54105	237 aa	Known RBP	13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	MAGOH	P61326	146 aa	Known RBP	13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	GPAT3	Q53EU6	434 aa		13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	FAM166A	Q6J272	317 aa		13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	OR52E4	Q8NGH9	312 aa		13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	TRNT1	Q96Q11	434 aa	Known RBP	13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	PIMREG	Q9BSJ6	248 aa		13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	OR11A1	Q9GZK7	315 aa		13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	MANSC1	Q9H8J5	431 aa		13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	SLC7A10	Q9NS82	523 aa		13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	KCNS2	Q9ULS6	477 aa		13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	TMED7	Q9Y3B3	224 aa		13.83	□□□□□ -0.2
SPIN3-229	ENST00000639809	YLPM1	P49750	1951 aa	Known RBP	13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809		A0A1W2PR80	420 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	OR6C65	A6NJZ3	312 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	BCAS1	O75363	584 aa	Predicted RBP	13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	SPAG7	O75391	227 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	CREB1	P16220	341 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	SRD5A1	P18405	259 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	HNF1A	P20823	631 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	CHI3L1	P36222	383 aa	Predicted RBP	13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	LRRC74A	Q0VAA2	488 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	FUT5	Q11128	374 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	GSTA3	Q16772	222 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	SWI5	Q1ZZU3	235 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	C3orf36	Q3SXR2	165 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	HSP90B2P	Q58FF3	399 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	ZNF440	Q8IYI8	595 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	CLEC4F	Q8N1N0	589 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	TRIML2	Q8N7C3	387 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	ZNF540	Q8NDQ6	660 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	RAB8B	Q92930	207 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	MARCO	Q9UEW3	520 aa	Predicted RBP	13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	OSGIN1	Q9UJX0	560 aa		13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.82	□□□□□ -0.2
SPIN3-229	ENST00000639809	HEATR1	Q9H583	2144 aa	Known RBP	13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	LOC390937	A0A1W2PQ73	354 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	AGAP5	A6NIR3	686 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	VWC2L	B2RUY7	222 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	PDE5A	O76074	875 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	GPI	P06744	558 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	ZNF16	P17020	682 aa	Predicted RBP	13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	FOXG1	P55316	489 aa	Predicted RBP	13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	SNRPD2	P62316	118 aa	Known RBP	13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	TSPO2	Q5TGU0	170 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	LRRC74B	Q6ZQY2	392 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	OLIG3	Q7RTU3	272 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	NUDCD3	Q8IVD9	361 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	HTRA1	Q92743	480 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	ZG16B	Q96DA0	208 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	KCNS3	Q9BQ31	491 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	SLC35A5	Q9BS91	424 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	KATNB1	Q9BVA0	655 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	C1QTNF6	Q9BXI9	259 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	AKTIP	Q9H8T0	292 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	SSU72	Q9NP77	194 aa	Known RBP	13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	BTNL2	Q9UIR0	455 aa		13.81	□□□□□ -0.2
SPIN3-229	ENST00000639809	TMEM72	A0PK05	275 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	CFAP73	A6NFT4	308 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	HMGN4	O00479	90 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	VAMP5	O95183	116 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	CPSF4	O95639	269 aa	Known RBP	13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	SERPINE1	P05121	402 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	IMPDH2	P12268	514 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	TACR3	P29371	465 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	ETV4	P43268	484 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	NR4A2	P43354	598 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	PLAUR	Q03405	335 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	PDCD2	Q16342	344 aa	Predicted RBP	13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	MST1L	Q2TV78	715 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	KRTAP24-1	Q3LI83	254 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	AAED1	Q7RTV5	226 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	ANKRD46	Q86W74	232 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms