RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.91□□□□□ -0.18
CLN6-219ENST00000637329 FAM69AQ5T7M9 428 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 MEDAGQ5VYS4 303 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 OR5M10Q6IEU7 315 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 C3orf33Q6P1S2 294 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 ADGRG3Q86Y34 549 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 CCDC103Q8IW40 242 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 LNX2Q8N448 690 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 IQCF1Q8N6M8 205 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 WDSUB1Q8N9V3 476 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 SLC25A43Q8WUT9 341 aaPredicted RBP13.91□□□□□ -0.18
CLN6-219ENST00000637329 IPCEF1Q8WWN9 437 aaPredicted RBP13.91□□□□□ -0.18
CLN6-219ENST00000637329 DDIT4LQ96D03 193 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 SAMD8Q96LT4 415 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 GPX7Q96SL4 187 aaPredicted RBP13.91□□□□□ -0.18
CLN6-219ENST00000637329 UTP23Q9BRU9 249 aaKnown RBP13.91□□□□□ -0.18
CLN6-219ENST00000637329 UBQLN3Q9H347 655 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 PROK2Q9HC23 129 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 NANSQ9NR45 359 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 CLN6Q9NWW5 311 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 HIF3AQ9Y2N7 669 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 HRH3Q9Y5N1 445 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 LAMA5O15230 3695 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 SMG1Q96Q15 3661 aaKnown RBP13.91□□□□□ -0.18
CLN6-219ENST00000637329 KNTC1P50748 2209 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 HEATR5AQ86XA9 2040 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 TRAV27A0A087WT01 109 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 TMEM72A0PK05 275 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 C2orf72A6NCS6 295 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 ARGFXA6NJG6 315 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 BHLHE40O14503 412 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 OR2T1O43869 369 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 AHSA1O95433 338 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 CH25HO95992 272 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 CLPTM1O96005 669 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 TSPAN19P0C672 248 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 ASAH2BP0C7U1 165 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 ZNF17P17021 662 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 DSCR4P56555 118 aaPredicted RBP13.9□□□□□ -0.18
CLN6-219ENST00000637329 EFNB1P98172 346 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 SELENBP1Q13228 472 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 FHL1Q13642 323 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 TUBA3CQ13748 450 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 OCLNQ16625 522 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 TIGD3Q6B0B8 471 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 ACSM5Q6NUN0 579 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 ARHGAP11AQ6P4F7 1023 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 TUBA3EQ6PEY2 450 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 ZNF773Q6PK81 442 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 ARSKQ6UWY0 536 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 FAM26EQ8N5C1 309 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 OR1J4Q8NGS1 313 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 TMEM163Q8TC26 289 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 FN3KQ9H479 309 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 MCCC2Q9HCC0 563 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 SERINC1Q9NRX5 453 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 STMN3Q9NZ72 180 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 LRFN1Q9P244 771 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 FBXL2Q9UKC9 423 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 VDAC3Q9Y277 283 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 SLC6A5Q9Y345 797 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 MAST4O15021 2626 aa13.9□□□□□ -0.18
CLN6-219ENST00000637329 M0R3G1 203 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 SURF4O15260 269 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 FAM20BO75063 409 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 CBR3O75828 277 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 BGLAPP02818 100 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 FUT1P19526 365 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 EEF1B2P24534 225 aaKnown RBP13.89□□□□□ -0.19
CLN6-219ENST00000637329 FMO3P31513 532 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 UQCRC1P31930 480 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 CLK1P49759 484 aaKnown RBP13.89□□□□□ -0.19
CLN6-219ENST00000637329 SLC35A2P78381 396 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 OC90Q02509 493 aaPredicted RBP13.89□□□□□ -0.19
CLN6-219ENST00000637329 SNAPC1Q16533 368 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 GLYR1Q49A26 553 aaPredicted RBP13.89□□□□□ -0.19
CLN6-219ENST00000637329 CLEC12AQ5QGZ9 265 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 ATP1A1-AS1Q5TC04 95 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 AGAP7PQ5VUJ5 663 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 C1orf140Q5VVS0 124 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 ISLR2Q6UXK2 745 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 MAMDC2Q7Z304 686 aaPredicted RBP13.89□□□□□ -0.19
CLN6-219ENST00000637329 MDGA2Q7Z553 956 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 NANOGNBQ7Z5D8 188 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 ZNF227Q86WZ6 799 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 GTPBP8Q8N3Z3 284 aaPredicted RBP13.89□□□□□ -0.19
CLN6-219ENST00000637329 ZNF248Q8NDW4 579 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 BPIFB6Q8NFQ5 453 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 OR4Q3Q8NH05 313 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 KCNE4Q8WWG9 221 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 KTI12Q96EK9 354 aaPredicted RBP13.89□□□□□ -0.19
CLN6-219ENST00000637329 PLEKHA8Q96JA3 519 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 AGAP4Q96P64 663 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 PTDSS2Q9BVG9 487 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 DUSP21Q9H596 190 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 TVP23BQ9NYZ1 205 aa13.89□□□□□ -0.19
CLN6-219ENST00000637329 CNOT2Q9NZN8 540 aaKnown RBP13.89□□□□□ -0.19
CLN6-219ENST00000637329 SNTNA6NMZ2 147 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 M0R129 80 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 IDH3BO43837 385 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms