RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 BNIP2Q12982 314 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 CEACAM7Q14002 265 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 SCARB2Q14108 478 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 HSP90B2PQ58FF3 399 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 RUNDC3AQ59EK9 446 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 PAQR6Q6TCH4 344 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 ZNF704Q6ZNC4 412 aaPredicted RBP12.22□□□□□ -0.45
PNKP-228ENST00000637325 C20orf204Q6ZNR8 217 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 DHDDSQ86SQ9 333 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 TGIF2LYQ8IUE0 185 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 PIGTQ969N2 578 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 SLC35B4Q969S0 331 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 MUCL1Q96DR8 90 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 ZNF607Q96SK3 696 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 CCL19Q99731 98 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 PARPBPQ9NWS1 579 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 CHST2Q9Y4C5 530 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 C2CD3Q4AC94 2353 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 ALPK2Q86TB3 2170 aa12.22□□□□□ -0.45
PNKP-228ENST00000637325 TRBV5-3A0A0A0MS03 114 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 CIB4A0PJX0 185 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 ELOA3DA6NLF2 546 aaPredicted RBP12.21□□□□□ -0.45
PNKP-228ENST00000637325 CCT8L1PA6NM43 557 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 RAMP1O60894 148 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 SMPD2O60906 423 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 SERPINB7O75635 380 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 GGT1P19440 569 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 IGHV1-2P23083 117 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 EDNRAP25101 427 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 LOXP28300 417 aaPredicted RBP12.21□□□□□ -0.45
PNKP-228ENST00000637325 H3F3AP84243 136 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 HOXC5Q00444 222 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 NFYCQ13952 458 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 TAB1Q15750 504 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 ELOA3BQ3SY89 546 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 OTUD3Q5T2D3 398 aaPredicted RBP12.21□□□□□ -0.45
PNKP-228ENST00000637325 C1orf140Q5VVS0 124 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 METTL21CQ5VZV1 264 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 FBXW9Q5XUX1 488 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 CASP12Q6UXS9 341 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 DLEU7Q6UYE1 221 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 LSRQ86X29 649 aaPredicted RBP12.21□□□□□ -0.45
PNKP-228ENST00000637325 C10orf111Q8N326 155 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 ELOA3Q8NG57 546 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 TSPEARQ8WU66 669 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 C3orf49Q96BT1 292 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 CPPED1Q9BRF8 314 aaPredicted RBP12.21□□□□□ -0.45
PNKP-228ENST00000637325 TMEM120AQ9BXJ8 343 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 IKZF5Q9H5V7 419 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 ZNF385DQ9H6B1 395 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 TMEM38AQ9H6F2 299 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 ESRP2Q9H6T0 727 aaKnown RBP12.21□□□□□ -0.45
PNKP-228ENST00000637325 ADPRHL2Q9NX46 363 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 UPB1Q9UBR1 384 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 ANGPT4Q9Y264 503 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 SLC9A8Q9Y2E8 581 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 GMEB1Q9Y692 573 aa12.21□□□□□ -0.45
PNKP-228ENST00000637325 FLNAP21333 2647 aaKnown RBP12.21□□□□□ -0.46
PNKP-228ENST00000637325 MTORP42345 2549 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 PRORSD1PA6NEY8 169 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 LIPT2A6NK58 231 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 AKR7A3O95154 331 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 AHSA1O95433 338 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 CD3EP07766 207 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 VIMP08670 466 aaKnown RBP12.2□□□□□ -0.46
PNKP-228ENST00000637325 GTF2E2P29084 291 aaKnown RBP12.2□□□□□ -0.46
PNKP-228ENST00000637325 AQP1P29972 269 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 ADSLP30566 484 aaPredicted RBP12.2□□□□□ -0.46
PNKP-228ENST00000637325 ARFIP2P53365 341 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 NCALDP61601 193 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 SF3A3Q12874 501 aaKnown RBP eCLIP12.2□□□□□ -0.46
PNKP-228ENST00000637325 CYP51A1Q16850 503 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 TMEM225Q6GV28 225 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 DHRS4L2Q6PKH6 230 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 GPAT4Q86UL3 456 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 P3H2Q8IVL5 708 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 DPP10Q8N608 796 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 TMEM99Q8N816 258 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 HIPK4Q8NE63 616 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 BHLHE22Q8NFJ8 381 aaPredicted RBP12.2□□□□□ -0.46
PNKP-228ENST00000637325 OR52E4Q8NGH9 312 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 RNF217Q8TC41 542 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 STK35Q8TDR2 534 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 ANKRD27Q96NW4 1050 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 CGREF1Q99674 301 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 PIP5K1AQ99755 562 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 ASB6Q9NWX5 421 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 SELENONQ9NZV5 590 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 FLVCR1Q9Y5Y0 555 aa12.2□□□□□ -0.46
PNKP-228ENST00000637325 CLOCKO15516 846 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 ARHGEF9O43307 516 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 RAD51DO75771 328 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 PLAUP00749 431 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 COX5AP20674 150 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 RGS8P57771 180 aaPredicted RBP12.19□□□□□ -0.46
PNKP-228ENST00000637325 MTPNP58546 118 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 ADAM8P78325 824 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 NKX6-1P78426 367 aaPredicted RBP12.19□□□□□ -0.46
PNKP-228ENST00000637325 FAPQ12884 760 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 SLC17A1Q14916 467 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms