RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 TVP23AA6NH52 213 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 SMAD9O15198 467 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 F13BP05160 661 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 RPS15P62841 145 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 PRICKLE4Q2TBC4 344 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 ABHD13Q7L211 337 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 CSNK1A1LQ8N752 337 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 OR2T35Q8NGX2 323 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 SEC22CQ9BRL7 303 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 KLF15Q9UIH9 416 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 PILRAQ9UKJ1 303 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 CABIN1Q9Y6J0 2220 aa12.9□□□□□ -0.34
CACNA1A-228ENST00000636610 PRR32B1ATL7 298 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 TPD52L2O43399 206 aaKnown RBP12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 PLRG1O43660 514 aaKnown RBP12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 CBX7O95931 251 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 FBXO45P0C2W1 286 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 GDNFP39905 211 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 KIR2DL1P43626 348 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 VEGFCP49767 419 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 SELENOPP49908 381 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 ITPRIPL2Q3MIP1 535 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 PYHIN1Q6K0P9 492 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 RSC1A1Q92681 617 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 GHITMQ9H3K2 345 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 METTL17Q9H7H0 456 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 OR10H1Q9Y4A9 318 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 C2orf16Q68DN1 1984 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 OR6C68A6NDL8 312 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 A8MUA0 341 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 DOK2O60496 412 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 CRYZL1O95825 349 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 H2AFB2P0C5Z0 115 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 CFL1P23528 166 aaKnown RBP12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 SIRPAP78324 504 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 PSG6Q00889 435 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 C9orf50Q5SZB4 431 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 FHL5Q5TD97 284 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 DMKNQ6E0U4 476 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 PRR23CQ6ZRP0 262 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 AVL9Q8NBF6 648 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 CAMKVQ8NCB2 501 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 OR2T4Q8NH00 348 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 FLVCR1-AS1Q8TAF5 88 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 HERVK_113Q902F9 699 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 ULBP3Q9BZM4 244 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 FOLH1BQ9HBA9 442 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 C2orf42Q9NWW7 574 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 SPATA2Q9UM82 520 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 RP1P56715 2156 aa12.89□□□□□ -0.35
CACNA1A-228ENST00000636610 GPR89AB7ZAQ6 455 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 I3L521 148 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 BRINP1O60477 761 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 PTP4A3O75365 173 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 AGR2O95994 175 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 EGFP01133 1207 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 GPR89BP0CG08 455 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 OR8G3PP0DMU2 310 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 ZNF250P15622 560 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 MAOAP21397 527 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 MAOBP27338 520 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 UBE2MP61081 183 aaKnown RBP12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 SLC25A25Q6KCM7 469 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 LUZP2Q86TE4 346 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 GPALPP1Q8IXQ4 340 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 SLC35F2Q8IXU6 374 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 OR52I2Q8NH67 350 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 MOSPD2Q8NHP6 518 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 SUN5Q8TC36 379 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 SP7Q8TDD2 431 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 NR4A3Q92570 626 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 RBM18Q96H35 190 aaKnown RBP12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 ELF4Q99607 663 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 KLHDC3Q9BQ90 382 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 ST6GALNAC2Q9UJ37 374 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 GTF2A1LQ9UNN4 478 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 A0A0B4J2E0 115 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 A0A1B0GX12 115 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 CYR61O00622 381 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 IFNA16P05015 189 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 THBS1P07996 1170 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 TMIGD3P0DMS9 266 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 ANXA3P12429 323 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 GBX2P52951 348 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 NRG3P56975 720 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 NANOS3P60323 173 aaKnown RBP12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 STX4Q12846 297 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 PLA2G7Q13093 441 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 PON3Q15166 354 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 HSD17B12Q53GQ0 312 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 TIGD3Q6B0B8 471 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 Q6ZTK2 550 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 TMPRSS11FQ6ZWK6 438 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 FAM109AQ8N4B1 249 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 RCBTB1Q8NDN9 531 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 ZNF680Q8NEM1 530 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 Q96M85 177 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 WDR92Q96MX6 357 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 SPACA6W5XKT8 324 aa12.88□□□□□ -0.35
CACNA1A-228ENST00000636610 MED12Q93074 2177 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms