RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 RSPO3Q9BXY4 272 aaPredicted RBP14.23□□□□□ -0.13
CLN8-209ENST00000635970 MS4A8Q9BY19 250 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 RERGLQ9H628 205 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 EMC7Q9NPA0 242 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 B3GAT2Q9NPZ5 323 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 SLAMF7Q9NQ25 335 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 MAN2C1Q9NTJ4 1040 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 KCNN3Q9UGI6 736 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 ITPR1Q14643 2758 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 SYT5O00445 386 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 PLPP1O14494 284 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 ERI3O43414 337 aaKnown RBP14.22□□□□□ -0.13
CLN8-209ENST00000635970 NSA2O95478 260 aaKnown RBP14.22□□□□□ -0.13
CLN8-209ENST00000635970 IGHA1P01876 353 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 FBLP22087 321 aaKnown RBP14.22□□□□□ -0.13
CLN8-209ENST00000635970 ZNF57Q68EA5 555 aaPredicted RBP14.22□□□□□ -0.13
CLN8-209ENST00000635970 BHLHB9Q6PI77 547 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 SHISA6Q6ZSJ9 500 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 CDH24Q86UP0 819 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 C9orf62Q8N4C0 152 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 SPERTQ8NA61 448 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 OR5T3Q8NGG3 340 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 OSTF1Q92882 214 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 MVB12AQ96EY5 273 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 SLC35G5Q96KT7 338 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 PRR14Q9BWN1 585 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 PINK1Q9BXM7 581 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 HCN3Q9P1Z3 774 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 NUP50Q9UKX7 468 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 AUP1Q9Y679 476 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 SLC22A7Q9Y694 548 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 NBEAQ8NFP9 2946 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 A0A0G2JPF8 293 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 ZSCAN5BA6NJL1 495 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 LEUTXA8MZ59 168 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 HNRNPCL2B2RXH8 293 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 HNRNPCL3B7ZW38 293 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 C9J4A7 227 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 DNAJB6O75190 326 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 HNRNPCL4P0DMR1 293 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 CD53P19397 219 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 BSGP35613 385 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 RFX3P48380 749 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 KHKP50053 298 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 CDH11P55287 796 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 STXBP1P61764 594 aaKnown RBP14.22□□□□□ -0.13
CLN8-209ENST00000635970 MRPL14Q6P1L8 145 aaKnown RBP14.22□□□□□ -0.13
CLN8-209ENST00000635970 ABHD13Q7L211 337 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 OR4M1Q8NGD0 313 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 OR5M3Q8NGP4 307 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 SUN3Q8TAQ9 357 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 C17orf62Q9BQA9 187 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 CYSLTR2Q9NS75 346 aa14.22□□□□□ -0.13
CLN8-209ENST00000635970 ELF5Q9UKW6 265 aaPredicted RBP14.22□□□□□ -0.13
CLN8-209ENST00000635970 PCSK5Q92824 1860 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 C7orf66A4D0T2 115 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 C21orf140B9A014 251 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 RTCAO00442 366 aaKnown RBP14.21□□□□□ -0.13
CLN8-209ENST00000635970 AKR7A2O43488 359 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 GALR3O60755 368 aaPredicted RBP14.21□□□□□ -0.13
CLN8-209ENST00000635970 SMIM10L1P0DMW3 83 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 DRD2P14416 443 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 AVPR1BP47901 424 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 HSPB3Q12988 150 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 PLA1AQ53H76 456 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 ATP1A1-AS1Q5TC04 95 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 TMEM64Q6YI46 380 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 NUDT13Q86X67 352 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 KIF18BQ86Y91 864 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 PRSS58Q8IYP2 241 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 UCN3Q969E3 161 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 GAL3ST3Q96A11 431 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 SMIM10Q96HG1 83 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 RBCK1Q9BYM8 510 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.21□□□□□ -0.13
CLN8-209ENST00000635970 MED28Q9H204 178 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 COPZ2Q9P299 210 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 TRPC4Q9UBN4 977 aa14.21□□□□□ -0.13
CLN8-209ENST00000635970 GPN3Q9UHW5 284 aaPredicted RBP14.21□□□□□ -0.13
CLN8-209ENST00000635970 FARSAQ9Y285 508 aaKnown RBP14.21□□□□□ -0.13
CLN8-209ENST00000635970 PKD1L2Q7Z442 2459 aa14.21□□□□□ -0.14
CLN8-209ENST00000635970 PTPRQQ9UMZ3 2332 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 LOC105371267A0A1B0GV96 52 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 B4GALT2O60909 372 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 KLF7O75840 302 aaPredicted RBP14.2□□□□□ -0.14
CLN8-209ENST00000635970 OR12D1P0DN82 309 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 PEPDP12955 493 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 HTR1FP30939 366 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 PER3P56645 1201 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 RPS15P62841 145 aaKnown RBP14.2□□□□□ -0.14
CLN8-209ENST00000635970 IL10RAQ13651 578 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 TRAM2Q15035 370 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 TRAM1Q15629 374 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 SYPL1Q16563 259 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 COL28A1Q2UY09 1125 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 VWA2Q5GFL6 755 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 AADACL4Q5VUY2 407 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 HBMQ6B0K9 141 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 TOR1AIP2Q8NFQ8 470 aa14.2□□□□□ -0.14
CLN8-209ENST00000635970 OR2L5Q8NG80 312 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms