RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 VNN3Q9NY84 501 aa2.62□□□□□ -1.99
PSPC1-208ENST00000635562 C1RLQ9NZP8 487 aa2.62□□□□□ -1.99
PSPC1-208ENST00000635562 CCDC59Q9P031 241 aaKnown RBP2.62□□□□□ -1.99
PSPC1-208ENST00000635562 EPHA6Q9UF33 1036 aa2.62□□□□□ -1.99
PSPC1-208ENST00000635562 SMPXQ9UHP9 88 aa2.62□□□□□ -1.99
PSPC1-208ENST00000635562 KIF25Q9UIL4 384 aa2.62□□□□□ -1.99
PSPC1-208ENST00000635562 IKZF2Q9UKS7 526 aa2.62□□□□□ -1.99
PSPC1-208ENST00000635562 ACSL5Q9ULC5 683 aa2.62□□□□□ -1.99
PSPC1-208ENST00000635562 PADI3Q9ULW8 664 aa2.62□□□□□ -1.99
PSPC1-208ENST00000635562 PSG11Q9UQ72 335 aa2.62□□□□□ -1.99
PSPC1-208ENST00000635562 RIPK3Q9Y572 518 aa2.62□□□□□ -1.99
PSPC1-208ENST00000635562 EVPLQ92817 2033 aa2.62□□□□□ -1.99
PSPC1-208ENST00000635562 ZFYVE9O95405 1425 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 AQRO60306 1485 aaKnown RBP eCLIP2.61□□□□□ -1.992e-6■■□□□ 13.8
PSPC1-208ENST00000635562 ZNF518AQ6AHZ1 1483 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 TRAV24A0A0B4J272 114 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 TRBV7-9A0A0J9YWB2 115 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 A0A1B0GVT2 93 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 C5orf60A6NFR6 353 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 SHISA7A6NL88 538 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 VSTM2BA6NLU5 285 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 M0QZ24 198 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 M0R036 132 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 PDHXO00330 501 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 ARPC1BO15143 372 aaKnown RBP2.61□□□□□ -1.99
PSPC1-208ENST00000635562 SLC31A2O15432 143 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 CFLARO15519 480 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 SGCEO43556 437 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 PLPP2O43688 288 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 ITM2AO43736 263 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 SCO2O43819 266 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 CHST1O43916 411 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 AIREO43918 545 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 DPM1O60762 260 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 NDUFS7O75251 213 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 SH3BGRLO75368 114 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 ATP6AP2O75787 350 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 SC5DO75845 299 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 ANP32DO95626 131 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 SNAP29O95721 258 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 LDOC1O95751 146 aaPredicted RBP2.61□□□□□ -1.99
PSPC1-208ENST00000635562 BAG3O95817 575 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 APOC1P02654 83 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 FGGP02679 453 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 GAPDHP04406 335 aaKnown RBP2.61□□□□□ -1.99
PSPC1-208ENST00000635562 TCRBP04435 133 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 ALPLP05186 524 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 HIST1H2AGP0C0S8 130 aaPredicted RBP2.61□□□□□ -1.99
PSPC1-208ENST00000635562 NBEAP1P0C6P0 100 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 LINC00614P0C842 121 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 T-ENOLP0DO92 83 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 SLC2A1P11166 492 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 PMCHP20382 165 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 HTR2CP28335 458 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 CSKP41240 450 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 SLC1A1P43005 524 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 GABRA4P48169 554 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 IDH2P48735 452 aaKnown RBP2.61□□□□□ -1.99
PSPC1-208ENST00000635562 XKP51811 444 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 PGGT1BP53609 377 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 PLA2G16P53816 162 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 ATP1B3P54709 279 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 TMEM33P57088 247 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 TAS2R60P59551 318 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 RAB10P61026 200 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 KCNJ2P63252 427 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 FLI1Q01543 452 aaPredicted RBP2.61□□□□□ -1.99
PSPC1-208ENST00000635562 IL10RBQ08334 325 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 TRAF3Q13114 568 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 FLOT2Q14254 428 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 TMEM132DQ14C87 1099 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 PSG5Q15238 335 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 TAF1AQ15573 450 aaPredicted RBP2.61□□□□□ -1.99
PSPC1-208ENST00000635562 SLC9A3R2Q15599 337 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 CDKN3Q16667 212 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 EIF2S3LQ2VIR3 472 aaKnown RBP2.61□□□□□ -1.99
PSPC1-208ENST00000635562 ZNF658BQ4V348 819 aaPredicted RBP2.61□□□□□ -1.99
PSPC1-208ENST00000635562 IDNKQ5T6J7 187 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 HACD4Q5VWC8 232 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 GGNBP1Q5YKI7 109 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 LCN10Q6JVE6 187 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 UQCC3Q6UW78 93 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 CERS6Q6ZMG9 384 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 C3P1Q6ZMU1 363 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 GCNT7Q6ZNI0 430 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 C17orf107Q6ZR85 190 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 ZNF621Q6ZSS3 439 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 ASB18Q6ZVZ8 466 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 MOB2Q70IA6 237 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 TIPARPQ7Z3E1 657 aaKnown RBP2.61□□□□□ -1.99
PSPC1-208ENST00000635562 DPPA2Q7Z7J5 298 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 SETD3Q86TU7 594 aaPredicted RBP2.61□□□□□ -1.99
PSPC1-208ENST00000635562 PLA2G4DQ86XP0 818 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 TMEM25Q86YD3 366 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 CALHM1Q8IU99 346 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.61□□□□□ -1.99
PSPC1-208ENST00000635562 APRG1Q8IVJ8 170 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 BEST3Q8N1M1 668 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 Q8N402 240 aa2.61□□□□□ -1.99
PSPC1-208ENST00000635562 RIBC1Q8N443 379 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms