RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 OR6M1Q8NGM8 313 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 OR4L1Q8NH43 312 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 C8orf46Q8TAG6 207 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM172AQ8WUF8 416 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 PATE1Q8WXA2 126 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 RXFP2Q8WXD0 754 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 SMPDL3AQ92484 453 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF524Q96C55 264 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 RAB39BQ96DA2 213 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 OMA1Q96E52 524 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 CATSPER2Q96P56 530 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 PSKH2Q96QS6 385 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 LYSMD1Q96S90 227 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 WRAP53Q9BUR4 548 aaKnown RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 NMNAT2Q9BZQ4 307 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 STRADBQ9C0K7 418 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 SIRPDQ9H106 197 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC26A1Q9H2B4 701 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 FNDC4Q9H6D8 234 aaPredicted RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF665Q9H7R5 613 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 UCK1Q9HA47 277 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 RDH14Q9HBH5 336 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 MRPL40Q9NQ50 206 aaKnown RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF71Q9NQZ8 489 aaPredicted RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 DYRK4Q9NR20 520 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM212BQ9NTI7 297 aaPredicted RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 NDUFA13Q9P0J0 144 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 COX16Q9P0S2 106 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF319Q9P2F9 582 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 DNAJC12Q9UKB3 198 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 POMT2Q9UKY4 750 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 GAB2Q9UQC2 676 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 ATP6V1DQ9Y5K8 247 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 AP1M2Q9Y6Q5 423 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 NCOA6Q14686 2063 aaPredicted RBP2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 ESPL1Q14674 2120 aa2.11□□□□□ -2.07
SMARCB1-208ENST00000634926 STAB1Q9NY15 2570 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 SPG11Q96JI7 2443 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 IGHV4-4A0A075B6R2 117 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 hCG_38984A0A1B0GV85 526 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 TMEM89A2RUT3 159 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 SIGLEC16A6NMB1 481 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 H3BMH7 237 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 BLOC1S5-TXNDC5H3BN57 136 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 LMX1BO60663 402 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 RAD1O60671 282 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 TRMUO75648 421 aaKnown RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 CDC123O75794 336 aaPredicted RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 STK17BO94768 372 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 AKR7A3O95154 331 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 CLDN1O95832 211 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 IFNB1P01574 187 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 PCCBP05166 539 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 HIST1H2AGP0C0S8 130 aaPredicted RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 PRSS56P0CW18 603 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 FUT1P19526 365 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 GPX3P22352 226 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 GLRA1P23415 457 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 AK4P27144 223 aaPredicted RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 SDC4P31431 198 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 TIMP3P35625 211 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 FEN1P39748 380 aaKnown RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 MDH1P40925 334 aaKnown RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 SOX3P41225 446 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 CAPZBP47756 277 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 LEPRP48357 1165 aaKnown RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 KLK7P49862 253 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 CCL11P51671 97 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 STC1P52823 247 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 NDST2P52849 883 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 GEMP55040 296 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 KRTAP10-1P60331 282 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 RHOAP61586 193 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 AP1S1P61966 158 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 NUCB2P80303 420 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 GUCY2DQ02846 1103 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC25A11Q02978 314 aaKnown RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 GABPB1Q06547 395 aaPredicted RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 PDZK1IP1Q13113 114 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 SCGB2A2Q13296 93 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 RFTN1Q14699 578 aaPredicted RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 CEBPEQ15744 281 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 IGFBP7Q16270 282 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 DPYSL2Q16555 572 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 CARTPTQ16568 116 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 C3AR1Q16581 482 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 GPAT3Q53EU6 434 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 PYCR3Q53H96 274 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 SPANXN4Q5MJ08 99 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 HENMT1Q5T8I9 393 aaKnown RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 CAPN13Q6MZZ7 669 aaPredicted RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 PNCKQ6P2M8 343 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 WDR59Q6PJI9 974 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 LRRC31Q6UY01 552 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 RFLNAQ6ZTI6 216 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 HSD11B1LQ7Z5J1 315 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 YRDCQ86U90 279 aaKnown RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 GKN2Q86XP6 184 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms