RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 ACTA2P62736 377 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 ACTG2P63267 376 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 NNATQ16517 81 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 RNF44Q7L0R7 432 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 ZNF687Q8N1G0 1237 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 SYS1Q8N2H4 156 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 LSMEM1Q8N8F7 131 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 OR11H4Q8NGC9 324 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 LGALS14Q8TCE9 139 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 ZPLD1Q8TCW7 415 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 DACT3Q96B18 629 aaPredicted RBP10.34□□□□□ -0.75
VARS2-213ENST00000625423 DERL3Q96Q80 235 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 ZCCHC4Q9H5U6 513 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 AUNIPQ9H7T9 357 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 BEX1Q9HBH7 125 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 CPNE7Q9UBL6 633 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 RPS6KB2Q9UBS0 482 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 A0A0J9YY10 115 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 IDSB3KWA1 339 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 PSMD9O00233 223 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 SELENOFO60613 162 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 WNT1P04628 370 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 HNRNPA2B1P22626 353 aaKnown RBP10.34□□□□□ -0.75
VARS2-213ENST00000625423 OR3A3P47888 321 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 PON3Q15166 354 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 ZNHIT3Q15649 155 aaPredicted RBP10.34□□□□□ -0.75
VARS2-213ENST00000625423 CDONQ4KMG0 1287 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 ULK3Q6PHR2 472 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 KIAA1324Q6UXG2 1013 aaKnown RBP10.34□□□□□ -0.75
VARS2-213ENST00000625423 LINC00114Q6XXX2 140 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 EMC7Q9NPA0 242 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 MRPL15Q9P015 296 aaKnown RBP10.34□□□□□ -0.75
VARS2-213ENST00000625423 SPATA2Q9UM82 520 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 TRABD2BA6NFA1 517 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 CDC123O75794 336 aaPredicted RBP10.33□□□□□ -0.76
VARS2-213ENST00000625423 ADRB1P08588 477 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 ANXA3P12429 323 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 P2RX3P56373 397 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 RAB38P57729 211 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 C19orf57Q0VDD7 668 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 ILF3Q12906 894 aaKnown RBP eCLIP10.33□□□□□ -0.76
VARS2-213ENST00000625423 GAS6Q14393 721 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 ANGPT1Q15389 498 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 HSD17B12Q53GQ0 312 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 CD276Q5ZPR3 534 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 FRMD1Q8N878 549 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 POMGNT2Q8NAT1 580 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 OR6K6Q8NGW6 343 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 ADAMTS14Q8WXS8 1223 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 HOXB13Q92826 284 aaPredicted RBP10.33□□□□□ -0.76
VARS2-213ENST00000625423 SGTBQ96EQ0 304 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 OR2M2Q96R28 347 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 TCEAL2Q9H3H9 227 aaPredicted RBP10.33□□□□□ -0.76
VARS2-213ENST00000625423 RANBP3Q9H6Z4 567 aaPredicted RBP10.33□□□□□ -0.76
VARS2-213ENST00000625423 MKKSQ9NPJ1 570 aaPredicted RBP10.33□□□□□ -0.76
VARS2-213ENST00000625423 NRIP3Q9NQ35 241 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 DZANK1Q9NVP4 752 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 NCDNQ9UBB6 729 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 CAMK2AQ9UQM7 478 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 ARHGEF17Q96PE2 2063 aaPredicted RBP10.33□□□□□ -0.76
VARS2-213ENST00000625423 SERPINI2O75830 405 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 H2AFB2P0C5Z0 115 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 GRPRP30550 384 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 MAGEB1P43366 347 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 SNTB2Q13425 540 aaKnown RBP10.33□□□□□ -0.76
VARS2-213ENST00000625423 GSG1Q2KHT4 349 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 ZNF542PQ5EBM4 170 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 RPL22L1Q6P5R6 122 aaKnown RBP10.33□□□□□ -0.76
VARS2-213ENST00000625423 CMTM4Q8IZR5 234 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 GIMAP1Q8WWP7 306 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 GCDHQ92947 438 aaPredicted RBP10.33□□□□□ -0.76
VARS2-213ENST00000625423 SPACA7Q96KW9 195 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 LMF2Q9BU23 707 aaKnown RBP10.33□□□□□ -0.76
VARS2-213ENST00000625423 SLC25A18Q9H1K4 315 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 FAM60AQ9NP50 221 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 NOX4Q9NPH5 578 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.33□□□□□ -0.76
VARS2-213ENST00000625423 MSRAQ9UJ68 235 aa10.33□□□□□ -0.76
VARS2-213ENST00000625423 TGFBR3LH3BV60 316 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 TNFRSF10CO14798 259 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 NOS1APO75052 506 aaPredicted RBP10.32□□□□□ -0.76
VARS2-213ENST00000625423 GATBO75879 557 aaKnown RBP10.32□□□□□ -0.76
VARS2-213ENST00000625423 GGTLC2Q14390 218 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 ST3GAL2Q16842 350 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 HES5Q5TA89 166 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 OVCH1Q7RTY7 1134 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 RCBTB1Q8NDN9 531 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 OR14A16Q8NHC5 309 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 RASD2Q96D21 266 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 MRGPRX1Q96LB2 322 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 HSPA12BQ96MM6 686 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 GPR137Q96N19 417 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 C2orf42Q9NWW7 574 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 NKIRAS2Q9NYR9 191 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 COPZ2Q9P299 210 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 PCDHGA9Q9Y5G4 932 aaKnown RBP10.32□□□□□ -0.76
VARS2-213ENST00000625423 OR6C68A6NDL8 312 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 OR2W5A6NFC9 320 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 ACOD1A6NK06 481 aa10.32□□□□□ -0.76
VARS2-213ENST00000625423 FAM171A2A8MVW0 826 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms