RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CPNE2Q96FN4 548 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-229ENST00000622668 KATNB1Q9BVA0 655 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 SLC19A3Q9BZV2 496 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 LOC102725191A0A1B0GVB3 256 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 CLDN24A6NM45 220 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 CLCA1A8K7I4 914 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 ZNF814B7Z6K7 855 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 M0R082 166 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 FOXS1O43638 330 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 PRAMEF4O60810 478 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 LILRB5O75023 590 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 GYPBP06028 91 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 C8BP07358 591 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 ANKRD34CP0C6C1 535 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 GGT1P19440 569 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 PEBP1P30086 187 aaKnown RBP8.32□□□□□ -1.08
HDAC9-229ENST00000622668 CAPGP40121 348 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 MAGEA12P43365 314 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 MXD1Q05195 221 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 SCRN3Q0VDG4 424 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 CLN3Q13286 438 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 PRAMEF9Q5VWM5 478 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 VASNQ6EMK4 673 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 SLC18B1Q6NT16 456 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 CAMKMTQ7Z624 323 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 LSM14AQ8ND56 463 aaKnown RBP8.32□□□□□ -1.08
HDAC9-229ENST00000622668 ZNF417Q8TAU3 575 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 TMEM203Q969S6 136 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 FBXO17Q96EF6 278 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 C10orf90Q96M02 699 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 ZNF587Q96SQ5 575 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-229ENST00000622668 SECISBP2Q96T21 854 aaKnown RBP8.32□□□□□ -1.08
HDAC9-229ENST00000622668 CCDC106Q9BWC9 280 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 HDHD5Q9BXW7 423 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 ACTR6Q9GZN1 396 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 AKIRIN1Q9H9L7 192 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-229ENST00000622668 LANCL2Q9NS86 450 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 CAB39Q9Y376 341 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-229ENST00000622668 HS3ST3B1Q9Y662 390 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 SLC35F4A4IF30 521 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 LOC110117498-PIK3R3F6TDL0 507 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 VAMP5O95183 116 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 PUDPQ08623 228 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 C19orf18Q8NEA5 215 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 OR4C3Q8NH37 302 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 USB1Q9BQ65 265 aaKnown RBP8.32□□□□□ -1.08
HDAC9-229ENST00000622668 C8orf4Q9NR00 106 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 DECR2Q9NUI1 292 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 TP53TG5Q9Y2B4 290 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 PKDREJQ9NTG1 2253 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 CEP295Q9C0D2 2601 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 A0A1B0GTH9 108 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 ANKRD30BLA7E2S9 258 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 ZNF195O14628 629 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 KLK8O60259 260 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 DLGAP3O95886 979 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 ITGB2P05107 769 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 TMIGD3P0DMS9 266 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-229ENST00000622668 DRD5P21918 477 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 CD96P40200 585 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 SQSTM1Q13501 440 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 H1FNTQ75WM6 255 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-229ENST00000622668 SLC43A2Q8N370 569 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 SUMF1Q8NBK3 374 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 OR13C2Q8NGS9 318 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 ABHD5Q8WTS1 349 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 LRR1Q96L50 414 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 SLC25A18Q9H1K4 315 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 MED16Q9Y2X0 877 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 PCDHGA7Q9Y5G6 932 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 A0A1W2PPV9 198 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 PRAMEF27A3QJZ7 478 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 ECDO95905 644 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-229ENST00000622668 IFNA6P05013 189 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 SP1P08047 785 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 CNR1P21554 472 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 SELPLGQ14242 412 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 EBPQ15125 230 aaKnown RBP8.31□□□□□ -1.08
HDAC9-229ENST00000622668 C11orf88Q6PI97 169 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 YTHDF3Q7Z739 585 aaKnown RBP8.31□□□□□ -1.08
HDAC9-229ENST00000622668 TRAPPC6BQ86SZ2 158 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 GID4Q8IVV7 300 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 MAML2Q8IZL2 1156 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-229ENST00000622668 CLIP4Q8N3C7 705 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 OR1J2Q8NGS2 313 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 BORCS8Q96FH0 119 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 TEX37Q96LM6 180 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 OR52D1Q9H346 318 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 POLE3Q9NRF9 147 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 QPCTLQ9NXS2 382 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 LRCH1Q9Y2L9 728 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 PMF1-BGLAPU3KQ54 211 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 SLC22A31A6NKX4 558 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 C12orf71A8MTZ7 269 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 HEXAP06865 529 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 COX6B1P14854 86 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 FKBP2P26885 142 aaKnown RBP8.31□□□□□ -1.08
HDAC9-229ENST00000622668 HNRNPFP52597 415 aaKnown RBP8.31□□□□□ -1.08
HDAC9-229ENST00000622668 MFAP5Q13361 173 aa8.31□□□□□ -1.08
HDAC9-229ENST00000622668 ZBED5Q49AG3 693 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms