RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 LINC01555Q8NAE3 123 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 RELL2Q8NC24 303 aaPredicted RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 COX14Q96I36 57 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 PLA2G12AQ9BZM1 189 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 AICDAQ9GZX7 198 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 KLHL31Q9H511 634 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 XKR8Q9H6D3 395 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 EGLN3Q9H6Z9 239 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 DUSP22Q9NRW4 184 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 C19orf12Q9NSK7 152 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 ACSS1Q9NUB1 689 aaPredicted RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 TESQ9UGI8 421 aaKnown RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 GPR52Q9Y2T5 361 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 GOLGA4Q13439 2230 aaKnown RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 SUSD5O60279 629 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 NTN1O95631 604 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 RNH1P13489 461 aaKnown RBP11.5□□□□□ -0.57
LITAF-221ENST00000622633 DDTP30046 118 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 S100A11P31949 105 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 SSR2P43308 183 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 CCR6P51684 374 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 CSNK1G2P78368 415 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 COL9A2Q14055 689 aaPredicted RBP11.5□□□□□ -0.57
LITAF-221ENST00000622633 KRT33BQ14525 404 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 MELKQ14680 651 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 ARHGAP19Q14CB8 494 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 TMEM52BQ4KMG9 183 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 TMEM31Q5JXX7 168 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 FAM46CQ5VWP2 391 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 RNLSQ5VYX0 342 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 METRNLQ641Q3 311 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 ZNF660Q6AZW8 331 aaPredicted RBP11.5□□□□□ -0.57
LITAF-221ENST00000622633 ZNF793Q6ZN11 406 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 ETV3LQ6ZN32 361 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 MORN4Q8NDC4 146 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 OR2L5Q8NG80 312 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 TMEM163Q8TC26 289 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 SPATA5L1Q9BVQ7 753 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 ABCG5Q9H222 651 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 GAB2Q9UQC2 676 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 SLC9A8Q9Y2E8 581 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 SLC27A6Q9Y2P4 619 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 MRPS23Q9Y3D9 190 aaKnown RBP11.5□□□□□ -0.57
LITAF-221ENST00000622633 TMEM218A2RU14 115 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 IGLON5A6NGN9 336 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 RFXAPO00287 272 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 RRP8O43159 456 aaKnown RBP11.5□□□□□ -0.57
LITAF-221ENST00000622633 ERAL1O75616 437 aaKnown RBP11.5□□□□□ -0.57
LITAF-221ENST00000622633 TIMP1P01033 207 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 TCRBP04435 133 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 CPEP16870 476 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 PPP2R1BP30154 601 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 P2RY2P41231 377 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 NPBWR1P48145 328 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 GAS1P54826 345 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 RPS25P62851 125 aaKnown RBP11.5□□□□□ -0.57
LITAF-221ENST00000622633 CDK5Q00535 292 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 ZNF234Q14588 700 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 LASP1Q14847 261 aaKnown RBP11.5□□□□□ -0.57
LITAF-221ENST00000622633 CD300LDQ6UXZ3 194 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 SLC29A4Q7RTT9 530 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 LRRTM4Q86VH4 590 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 OR10K1Q8NGX5 313 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 GCDHQ92947 438 aaPredicted RBP11.5□□□□□ -0.57
LITAF-221ENST00000622633 C1GALT1C1Q96EU7 318 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 C16orf58Q96GQ5 468 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 CDCA3Q99618 268 aaPredicted RBP11.5□□□□□ -0.57
LITAF-221ENST00000622633 UNKLQ9H9P5 680 aaKnown RBP11.5□□□□□ -0.57
LITAF-221ENST00000622633 NLGN3Q9NZ94 848 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 CHTOPQ9Y3Y2 248 aaKnown RBP11.5□□□□□ -0.57
LITAF-221ENST00000622633 NUBP2Q9Y5Y2 271 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 KCNE3Q9Y6H6 103 aa11.5□□□□□ -0.57
LITAF-221ENST00000622633 A0A087X0M5 115 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 A0A0A6YYD5 115 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 A0A1B0GX30 115 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 PGRMC2O15173 223 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 LATO43561 262 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 SSNA1O43805 119 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 CRTAPO75718 401 aaPredicted RBP11.49□□□□□ -0.57
LITAF-221ENST00000622633 KRT33AO76009 404 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 HPXP02790 462 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 C8orf89P0DMQ9 161 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 TFPIP10646 304 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 CAV3P56539 151 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 EFNB1P98172 346 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 FUT5Q11128 374 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 CLINT1Q14677 625 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 NTRK2Q16620 822 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 C1orf94Q6P1W5 598 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 FGD2Q7Z6J4 655 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 LAPTM4BQ86VI4 370 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 ETFBKMTQ8IXQ9 262 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 SYT14Q8NB59 555 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 TM9SF4Q92544 642 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 FGF11Q92914 225 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 RNFT2Q96EX2 444 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 EGLN1Q9GZT9 426 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 PCBD2Q9H0N5 130 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 HDHD2Q9H0R4 259 aa11.49□□□□□ -0.57
LITAF-221ENST00000622633 LTBP2Q14767 1821 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms