RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 NKX2-6A6NCS4 301 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 LIPT2A6NK58 231 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 ELOA3DA6NLF2 546 aaPredicted RBP12.77□□□□□ -0.36
CBWD3-217ENST00000621474 FTCDNL1E5RQL4 147 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 FZD7O75084 574 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 SEMG1P04279 462 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 FCGR2AP12318 317 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 ATP6V1B2P21281 511 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 CBX1P83916 185 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 MS4A2Q01362 244 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 PIN1Q13526 163 aaPredicted RBP12.77□□□□□ -0.36
CBWD3-217ENST00000621474 ELOA3BQ3SY89 546 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 IQCCQ4KMZ1 466 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 C1orf140Q5VVS0 124 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 ABLIM2Q6H8Q1 611 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 PPP4R4Q6NUP7 873 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 DEF8Q6ZN54 512 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 FCRLAQ7L513 359 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 P4HA3Q7Z4N8 544 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 P3H2Q8IVL5 708 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 ELOA3Q8NG57 546 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 STK35Q8TDR2 534 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 ASB5Q8WWX0 329 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 LZICQ8WZA0 190 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 SLC47A1Q96FL8 570 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 PSD2Q9BQI7 771 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 TIGARQ9NQ88 270 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 SLC7A7Q9UM01 511 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 A4GNTQ9UNA3 340 aa12.77□□□□□ -0.36
CBWD3-217ENST00000621474 TRAPPC13A5PLN9 417 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 FAM90A27PA6NNH2 459 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 C19orf84I3L1E1 186 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 J3KTA2 159 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 FFAR1O14842 300 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 CYTIPO60759 359 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 SS18L1O75177 396 aaPredicted RBP12.77□□□□□ -0.37
CBWD3-217ENST00000621474 PRSS23O95084 383 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 SYNGR4O95473 234 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 IL18BPO95998 194 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 PNMTP11086 282 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 FPR1P21462 350 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 GRNP28799 593 aaKnown RBP12.77□□□□□ -0.37
CBWD3-217ENST00000621474 P2RY4P51582 365 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 CSNK2A1P68400 391 aaPredicted RBP12.77□□□□□ -0.37
CBWD3-217ENST00000621474 IFI44LQ53G44 452 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 OR2A2Q6IF42 318 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 PGM2L1Q6PCE3 622 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 GDF7Q7Z4P5 450 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 GEMIN6Q8WXD5 167 aaKnown RBP12.77□□□□□ -0.37
CBWD3-217ENST00000621474 STARD4Q96DR4 205 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 C7orf34Q96L11 122 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 SFXN3Q9BWM7 321 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 JKAMPQ9P055 326 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 ACTR3BQ9P1U1 418 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 CLEC4AQ9UMR7 237 aa12.77□□□□□ -0.37
CBWD3-217ENST00000621474 ASH1LQ9NR48 2969 aaKnown RBP12.76□□□□□ -0.37
CBWD3-217ENST00000621474 PKDREJQ9NTG1 2253 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 DNPH1O43598 174 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 PRKD3O94806 890 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 CGAP01215 116 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 CRHP06850 196 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 IDUAP35475 653 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 RPS5P46782 204 aaKnown RBP12.76□□□□□ -0.37
CBWD3-217ENST00000621474 TRIM25Q14258 630 aaKnown RBP12.76□□□□□ -0.37
CBWD3-217ENST00000621474 OR7A5Q15622 319 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 FAM214BQ7L5A3 538 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 NKAIN4Q8IVV8 208 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 CCDC103Q8IW40 242 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 TAAR8Q969N4 342 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 SLC41A3Q96GZ6 507 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 GMPPAQ96IJ6 420 aaPredicted RBP12.76□□□□□ -0.37
CBWD3-217ENST00000621474 PRRC1Q96M27 445 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 BTBD10Q9BSF8 475 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 THTPAQ9BU02 230 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 PRRG4Q9BZD6 226 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 MAN2C1Q9NTJ4 1040 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 RPS6KA6Q9UK32 745 aa12.76□□□□□ -0.37
CBWD3-217ENST00000621474 SAMD4AQ9UPU9 718 aaKnown RBP12.76□□□□□ -0.37
CBWD3-217ENST00000621474 ALPK2Q86TB3 2170 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 TCRBV5S2A0A599 114 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 ZNF716A6NP11 495 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 DVL2O14641 736 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 ACOT8O14734 319 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 GYG2O15488 501 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 OR5F1O95221 314 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 AGTR1P30556 359 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 OPRM1P35372 400 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 YAP1P46937 504 aaKnown RBP12.75□□□□□ -0.37
CBWD3-217ENST00000621474 OR2B6P58173 313 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 VLDLRP98155 873 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 LTBQ06643 244 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 RNPS1Q15287 305 aaKnown RBP12.75□□□□□ -0.37
CBWD3-217ENST00000621474 SLC25A35Q3KQZ1 300 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 LCN8Q6JVE9 175 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 CYP2R1Q6VVX0 501 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 FKBP9P1Q75LS8 142 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 MAMDC2Q7Z304 686 aaPredicted RBP12.75□□□□□ -0.37
CBWD3-217ENST00000621474 BTLAQ7Z6A9 289 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 TUSC5Q8IXB3 177 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 CCDC124Q96CT7 223 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms