RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 GLYR1Q49A26 553 aaPredicted RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 SLC35D2Q76EJ3 337 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 NKAIN3Q8N8D7 197 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 C4orf32Q8N8J7 132 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 RELL2Q8NC24 303 aaPredicted RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 DUSP19Q8WTR2 217 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 C1orf74Q96LT6 269 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 C1QTNF2Q9BXJ5 285 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 YIPF1Q9Y548 306 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 OR1A2Q9Y585 309 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 PDE4DIPQ5VU43 2346 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 HPGDSO60760 199 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 FZD7O75084 574 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 CLEC3BP05452 202 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 CD1EP15812 388 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ANXA7P20073 488 aaKnown RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 PLA2G5P39877 138 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 RNF144AP50876 292 aaPredicted RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 SGSHP51688 502 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 LILRA4P59901 499 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 LTBQ06643 244 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 SMAD4Q13485 552 aaKnown RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 MOGAT2Q3SYC2 334 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ENPP6Q6UWR7 440 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 MEX3BQ6ZN04 569 aaKnown RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 METTL27Q8N6F8 245 aaPredicted RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 MS4A4EQ96PG1 132 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 SLC7A7Q9UM01 511 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 GAB2Q9UQC2 676 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 TOPAZ1Q8N9V7 1692 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 LOC102723532A0A0G2JNH3 316 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 E5RGE8 158 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 KIAA0355O15063 1070 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ALPIP09923 528 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 CD1DP15813 335 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 PCP4P48539 62 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 TMEM183BQ1AE95 376 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 Q6ZNX1 250 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 GPR155Q7Z3F1 870 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 FRMD1Q8N878 549 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 GPR174Q9BXC1 333 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ERVMER34-1Q9H9K5 563 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 DCAF13Q9NV06 445 aaKnown RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 A1L4Q6 167 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 C11orf98E9PRG8 122 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 RNASET2O00584 256 aaKnown RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 HPNP05981 417 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 SLC2A1P11166 492 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 USF1P22415 310 aaPredicted RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 CCKARP32238 428 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 EPHA4P54764 986 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 HSF1Q00613 529 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 SHHQ15465 462 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ACOT6Q3I5F7 207 aaPredicted RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 BCL7AQ4VC05 210 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 SLX4IPQ5VYV7 408 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF321PQ8N8H1 164 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 NUP37Q8NFH4 326 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 OR1J2Q8NGS2 313 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 OR13C4Q8NGS5 318 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 TMEM163Q8TC26 289 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ALG12Q9BV10 488 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 CLMPQ9H6B4 373 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 CDH20Q9HBT6 801 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 STEAP1Q9UHE8 339 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 LOC105369274A0A096LPK9 316 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 OR6C68A6NDL8 312 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 TRIM77I1YAP6 450 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 MTX2O75431 263 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 POP7O75817 140 aaKnown RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 SNAI1O95863 264 aaPredicted RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 HBQ1P09105 142 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF44P15621 663 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 SOX18P35713 384 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 LIPNQ5VXI9 398 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ALKAL2Q6UX46 152 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 GRINAQ7Z429 371 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 OR4N4Q8N0Y3 316 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 CLRN3Q8NCR9 226 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 THAP3Q8WTV1 239 aaPredicted RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 LMF1Q96S06 567 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 VAMP8Q9BV40 100 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ST6GALNAC5Q9BVH7 336 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 RAB18Q9NP72 206 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 LIN7CQ9NUP9 197 aaKnown RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 PTPRZ1P23471 2315 aaPredicted RBP6.71□□□□□ -1.33
COLCA1-205ENST00000620864 MT-ND4P03905 459 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 ASGR2P07307 311 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 THBS1P07996 1170 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 FGF4P08620 206 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 CRHBPP24387 322 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 CEACAM7Q14002 265 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 LDLRAD1Q5T700 205 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 IL34Q6ZMJ4 242 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 ST8SIA4Q92187 359 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 ELF4Q99607 663 aaPredicted RBP6.71□□□□□ -1.33
COLCA1-205ENST00000620864 ARHGDIGQ99819 225 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 TOLLIPQ9H0E2 274 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 EHFQ9NZC4 300 aa6.71□□□□□ -1.33
COLCA1-205ENST00000620864 SPEF2Q9C093 1822 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms