RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 HNF4GQ14541 408 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 GGTA1PQ4G0N0 100 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 OLFML2AQ68BL7 652 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 IL34Q6ZMJ4 242 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.59□□□□□ -0.87
VPS11-207ENST00000620429 SLC30A8Q8IWU4 369 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 OR4A4PQ8NGN8 299 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 OR6K2Q8NGY2 324 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 POC1BQ8TC44 478 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 GEMIN6Q8WXD5 167 aaKnown RBP9.59□□□□□ -0.87
VPS11-207ENST00000620429 SORCS1Q8WY21 1168 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 PIGKQ92643 395 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 GCDHQ92947 438 aaPredicted RBP9.59□□□□□ -0.87
VPS11-207ENST00000620429 MTERF1Q99551 399 aaKnown RBP9.59□□□□□ -0.87
VPS11-207ENST00000620429 SEC61A2Q9H9S3 476 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 ZFYVE1Q9HBF4 777 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 TREM1Q9NP99 234 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 LHX9Q9NQ69 397 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 SPG21Q9NZD8 308 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 KCND3Q9UK17 655 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 SLC22A14Q9Y267 594 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 ENPP4Q9Y6X5 453 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 CCDC88CQ9P219 2028 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 PRSS47A8MTI9 375 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 FADS1O60427 444 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 PRAMEF4O60810 478 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 OR2F2O95006 317 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 SERPIND1P05546 499 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 LINC00614P0C842 121 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 NME1P15531 152 aaKnown RBP9.59□□□□□ -0.87
VPS11-207ENST00000620429 TYRP1P17643 537 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 GLP1RP43220 463 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 KIR3DL2P43630 455 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 F2RL1P55085 397 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 RHOAP61586 193 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 ACSM2AQ08AH3 577 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 NAE1Q13564 534 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 OR2F1Q13607 317 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 SURF2Q15527 256 aaPredicted RBP9.59□□□□□ -0.87
VPS11-207ENST00000620429 TRAM1Q15629 374 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 ZNF805Q5CZA5 627 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 RNASE10Q5GAN6 216 aaKnown RBP9.59□□□□□ -0.87
VPS11-207ENST00000620429 ARMC12Q5T9G4 340 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 CPTPQ5TA50 214 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 PRAMEF9Q5VWM5 478 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 ACSM2BQ68CK6 577 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 TPGS2Q68CL5 300 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 ANKRD33Q7Z3H0 272 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 OR2AK2Q8NG84 335 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 OR56A3Q8NH54 315 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 MYLIPQ8WY64 445 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 LRIG1Q96JA1 1093 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 PRDM6Q9NQX0 595 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 MMP26Q9NRE1 261 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 RCE1Q9Y256 329 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 FCF1Q9Y324 198 aaKnown RBP9.59□□□□□ -0.87
VPS11-207ENST00000620429 A0A0G2JK05 382 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 H7C1Q1 480 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 PRODHO43272 600 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 SOX14O95416 240 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 CLDN7O95471 211 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 CD160O95971 181 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 IGFBP1P08833 259 aaPredicted RBP9.58□□□□□ -0.88
VPS11-207ENST00000620429 TBXA2RP21731 343 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 ACKR3P25106 362 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 AOAHP28039 575 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 NRG3P56975 720 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 RAP1AP62834 184 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 HTRA4P83105 476 aaPredicted RBP9.58□□□□□ -0.88
VPS11-207ENST00000620429 SORDQ00796 357 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 GAMTQ14353 236 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 RBM39Q14498 530 aaKnown RBP9.58□□□□□ -0.88
VPS11-207ENST00000620429 USF2Q15853 346 aaPredicted RBP9.58□□□□□ -0.88
VPS11-207ENST00000620429 ANXA8L1Q5VT79 327 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 CLEC9AQ6UXN8 241 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 ZNF783Q6ZMS7 281 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 ZNF546Q86UE3 836 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 PRSS35Q8N3Z0 413 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 AUTS2Q8WXX7 1259 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 ROBO4Q8WZ75 1007 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 ATG10Q9H0Y0 220 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 SIRT7Q9NRC8 400 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 TMEM100Q9NV29 134 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 TVP23BQ9NYZ1 205 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 VPS29Q9UBQ0 182 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 SLC35A3Q9Y2D2 325 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 ZNF840PA6NDX5 716 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 ACOD1A6NK06 481 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 H3BN98 237 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 H7C4K7 107 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 OR12D1P0DN82 309 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 HMGA1P17096 107 aaKnown RBP9.58□□□□□ -0.88
VPS11-207ENST00000620429 CPT2P23786 658 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 GAGE1Q13065 139 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 C2orf68Q2NKX9 166 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 ALG11Q2TAA5 492 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 GFOD2Q3B7J2 385 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 PLEKHN1Q494U1 663 aaPredicted RBP9.58□□□□□ -0.88
VPS11-207ENST00000620429 TMEM31Q5JXX7 168 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 COX20Q5RI15 118 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms