RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 TIMP1P01033 207 aa12.02□□□□□ -0.49
SKP2-209ENST00000620197 PSMB1P20618 241 aaKnown RBP12.02□□□□□ -0.49
SKP2-209ENST00000620197 ZP3P21754 424 aa12.02□□□□□ -0.49
SKP2-209ENST00000620197 ZNF81P51508 661 aa12.02□□□□□ -0.49
SKP2-209ENST00000620197 RPS4XP62701 263 aaKnown RBP12.02□□□□□ -0.49
SKP2-209ENST00000620197 KLHL12Q53G59 568 aa12.02□□□□□ -0.49
SKP2-209ENST00000620197 ZNF626Q68DY1 528 aa12.02□□□□□ -0.49
SKP2-209ENST00000620197 BEST4Q8NFU0 473 aa12.02□□□□□ -0.49
SKP2-209ENST00000620197 TRIM43Q96BQ3 446 aaPredicted RBP12.02□□□□□ -0.49
SKP2-209ENST00000620197 OR14A2Q96R54 314 aa12.02□□□□□ -0.49
SKP2-209ENST00000620197 MYADMQ96S97 322 aa12.02□□□□□ -0.49
SKP2-209ENST00000620197 LIN7BQ9HAP6 207 aa12.02□□□□□ -0.49
SKP2-209ENST00000620197 BRD7Q9NPI1 651 aa12.02□□□□□ -0.49
SKP2-209ENST00000620197 DNAJB12Q9NXW2 375 aaKnown RBP12.02□□□□□ -0.49
SKP2-209ENST00000620197 COPS3Q9UNS2 423 aa12.02□□□□□ -0.49
SKP2-209ENST00000620197 FOXJ3Q9UPW0 622 aa12.02□□□□□ -0.49
SKP2-209ENST00000620197 CYR61O00622 381 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 SNAPC5O75971 98 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 IL5P05113 134 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 CLTBP09497 229 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 GIPP09681 153 aaPredicted RBP12.01□□□□□ -0.49
SKP2-209ENST00000620197 SRMP19623 302 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 PTGS2P35354 604 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 HCCSP53701 268 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 ILF3Q12906 894 aaKnown RBP eCLIP12.01□□□□□ -0.49
SKP2-209ENST00000620197 METTL11BQ5VVY1 283 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 RGS7BPQ6MZT1 257 aaPredicted RBP12.01□□□□□ -0.49
SKP2-209ENST00000620197 ZAR1Q86SH2 424 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 EXD3Q8N9H8 876 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 CDRT4Q8N9R6 151 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 SPPL3Q8TCT6 385 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 THEM6Q8WUY1 208 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 CCDC86Q9H6F5 360 aaKnown RBP12.01□□□□□ -0.49
SKP2-209ENST00000620197 MGAT4CQ9UBM8 478 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 FLVCR2Q9UPI3 526 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 FANCMQ8IYD8 2048 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 GPRIN2O60269 458 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 AK1P00568 194 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 FCARP24071 287 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 VSX2P58304 361 aaPredicted RBP12.01□□□□□ -0.49
SKP2-209ENST00000620197 GPR68Q15743 365 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 TP53I3Q53FA7 332 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 TJAP1Q5JTD0 557 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 OR6V1Q8N148 313 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 ARL14Q8N4G2 192 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.01□□□□□ -0.49
SKP2-209ENST00000620197 NPEPL1Q8NDH3 523 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 NSMAFQ92636 917 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 TNFRSF13CQ96RJ3 184 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 GPX7Q96SL4 187 aaPredicted RBP12.01□□□□□ -0.49
SKP2-209ENST00000620197 SHARPINQ9H0F6 387 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 TAS2R5Q9NYW4 299 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 CXXC1Q9P0U4 656 aaPredicted RBP12.01□□□□□ -0.49
SKP2-209ENST00000620197 A0A1W2PPL8 197 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 A8MXK9 166 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 NPIPB9F8W1W9 429 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 NKX2-2O95096 273 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 EML2O95834 649 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 HIST1H1CP16403 213 aaKnown RBP12.01□□□□□ -0.49
SKP2-209ENST00000620197 DIO1P49895 249 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 BLVRAP53004 296 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 FAM78AQ5JUQ0 283 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 FCRL6Q6DN72 434 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 PWWP2BQ6NUJ5 590 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 OVCH2Q7RTZ1 564 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 SLC36A1Q7Z2H8 476 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 TMEM52Q8NDY8 209 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 OR2T35Q8NGX2 323 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 RSC1A1Q92681 617 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 RBPMSQ93062 196 aaKnown RBP12.01□□□□□ -0.49
SKP2-209ENST00000620197 CNN2Q99439 309 aaKnown RBP12.01□□□□□ -0.49
SKP2-209ENST00000620197 OR51V1Q9H2C8 321 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 PCOLCE2Q9UKZ9 415 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 PCDHGA5Q9Y5G8 931 aa12.01□□□□□ -0.49
SKP2-209ENST00000620197 CPAMD8Q8IZJ3 1885 aa12□□□□□ -0.49
SKP2-209ENST00000620197 SNRPGP15A8MWD9 76 aa12□□□□□ -0.49
SKP2-209ENST00000620197 CTSVO60911 334 aa12□□□□□ -0.49
SKP2-209ENST00000620197 IFNGR1P15260 489 aa12□□□□□ -0.49
SKP2-209ENST00000620197 MAT2AP31153 395 aaKnown RBP12□□□□□ -0.49
SKP2-209ENST00000620197 IGFALSP35858 605 aa12□□□□□ -0.49
SKP2-209ENST00000620197 MAP2K6P52564 334 aa12□□□□□ -0.49
SKP2-209ENST00000620197 TCTE1Q5JU00 501 aa12□□□□□ -0.49
SKP2-209ENST00000620197 SLC35D3Q5M8T2 416 aa12□□□□□ -0.49
SKP2-209ENST00000620197 B3GNTL1Q67FW5 361 aaPredicted RBP12□□□□□ -0.49
SKP2-209ENST00000620197 ARHGEF39Q8N4T4 335 aa12□□□□□ -0.49
SKP2-209ENST00000620197 CYB561A3Q8NBI2 242 aa12□□□□□ -0.49
SKP2-209ENST00000620197 OR52I2Q8NH67 350 aa12□□□□□ -0.49
SKP2-209ENST00000620197 OR4C6Q8NH72 309 aa12□□□□□ -0.49
SKP2-209ENST00000620197 ARMC5Q96C12 935 aa12□□□□□ -0.49
SKP2-209ENST00000620197 ASB16Q96NS5 453 aa12□□□□□ -0.49
SKP2-209ENST00000620197 NCDNQ9UBB6 729 aa12□□□□□ -0.49
SKP2-209ENST00000620197 RCE1Q9Y256 329 aa12□□□□□ -0.49
SKP2-209ENST00000620197 MAB21L2Q9Y586 359 aa12□□□□□ -0.49
SKP2-209ENST00000620197 A0A0C4DFX4 3053 aa12□□□□□ -0.49
SKP2-209ENST00000620197 B3GALNT1O75752 331 aa12□□□□□ -0.49
SKP2-209ENST00000620197 GYPBP06028 91 aa12□□□□□ -0.49
SKP2-209ENST00000620197 LCN1P31025 176 aa12□□□□□ -0.49
SKP2-209ENST00000620197 NANOS3P60323 173 aaKnown RBP12□□□□□ -0.49
SKP2-209ENST00000620197 RPS15P62841 145 aaKnown RBP12□□□□□ -0.49
SKP2-209ENST00000620197 LINC01590Q5TEZ4 76 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms