RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 ACTL9Q8TC94 416 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SNAPC3Q92966 411 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 LRRC61Q9BV99 259 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 FADS3Q9Y5Q0 445 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PCDH15Q96QU1 1955 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 FAM181BA6NEQ2 426 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 HMX3A6NHT5 357 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 C17orf112F2Z3M2 114 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 YY2O15391 372 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 EIF4E2O60573 245 aaKnown RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 ABLIM3O94929 683 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 C1GALT1C1LP0DN25 315 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 MAGP20916 626 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 CTSSP25774 331 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 ABCD3P28288 659 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 GRIA1P42261 906 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 JAM2P57087 298 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SNTB2Q13425 540 aaKnown RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 KIAA1614Q5VZ46 1190 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 P2RY8Q86VZ1 359 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 AENQ8WTP8 325 aaKnown RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 THEM6Q8WUY1 208 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OXNAD1Q96HP4 312 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 COL21A1Q96P44 957 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 HBEGFQ99075 208 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 TMEM150BA6NC51 233 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 ITGAMP11215 1152 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 TEAD1P28347 426 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 GNG2P59768 71 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 GALNT1Q10472 559 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 CBLBQ13191 982 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 KLHDC8AQ8IYD2 350 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 ZZZ3Q8IYH5 903 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PQLC1Q8N2U9 271 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SNRNP27Q8WVK2 155 aaKnown RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 ROBO4Q8WZ75 1007 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 ITPKCQ96DU7 683 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 ZNF764Q96H86 408 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 SMOQ99835 787 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 ZFP57Q9NU63 452 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PILRBQ9UKJ0 227 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 A0A0B4J293 547 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 NDUFS8O00217 210 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PIRO00625 290 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 HOXA3O43365 443 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 ITIH1P19827 911 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 GIFP27352 417 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 NKX6-1P78426 367 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 OR4F5Q8NH21 305 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SCPEP1Q9HB40 452 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 C8orf4Q9NR00 106 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 C16orf97H3BN30 126 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ARL6IP5O75915 188 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 MT-ND2P03891 347 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 TCTN3Q6NUS6 607 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 BIVMQ86UB2 503 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 LILRA2Q8N149 483 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ARMC10Q8N2F6 343 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 B3GNT7Q8NFL0 401 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 GEMIN6Q8WXD5 167 aaKnown RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 BPIFA2Q96DR5 249 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 SLC35E1Q96K37 410 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ZIM3Q96PE6 472 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ZNF317Q96PQ6 595 aaPredicted RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 LANCL2Q9NS86 450 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 CLEC4EQ9ULY5 219 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 HS3ST2Q9Y278 367 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ZNF860A6NHJ4 632 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 EPOP01588 193 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 SNCAP37840 140 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 PPP5CP53041 499 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 PGGT1BP53609 377 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 RAB14P61106 215 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 TCEAL4Q96EI5 215 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 C9orf16Q9BUW7 83 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 BEX1Q9HBH7 125 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 DLL4Q9NR61 685 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 TPST2O60704 377 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ZGLP1P0C6A0 271 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 PRKCAP17252 672 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 FMO3P31513 532 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 IL2RGP31785 369 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 ASPAP45381 313 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 PPT1P50897 306 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 UBE2KP61086 200 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 DUSP8Q13202 625 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 SCARB2Q14108 478 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 FAHD2BQ6P2I3 314 aaPredicted RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 ZNF788Q6ZQV5 615 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 FAHD2AQ96GK7 314 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 METTL8Q9H825 291 aaKnown RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 CLN8Q9UBY8 286 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 LAMP3Q9UQV4 416 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 CORINQ9Y5Q5 1042 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 POM121CA8CG34 1229 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 BUD23O43709 281 aaKnown RBP3.09□□□□□ -1.91
LPP-220ENST00000617246 TFP02787 698 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 HNRNPCP07910 306 aaKnown RBP eCLIP3.09□□□□□ -1.915e-6■■■□□ 15.4
LPP-220ENST00000617246 SMIM17P0DL12 118 aa3.09□□□□□ -1.91
LPP-220ENST00000617246 FASP25445 335 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms