RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PIGQQ9BRB3 760 aa13.35□□□□□ -0.27
UBXN1-218ENST00000616865 PRR14Q9BWN1 585 aa13.35□□□□□ -0.27
UBXN1-218ENST00000616865 RSPO3Q9BXY4 272 aaPredicted RBP13.35□□□□□ -0.27
UBXN1-218ENST00000616865 OR2B2Q9GZK3 357 aa13.35□□□□□ -0.27
UBXN1-218ENST00000616865 UBQLN3Q9H347 655 aa13.35□□□□□ -0.27
UBXN1-218ENST00000616865 CTPS2Q9NRF8 586 aa13.35□□□□□ -0.27
UBXN1-218ENST00000616865 SERINC1Q9NRX5 453 aa13.35□□□□□ -0.27
UBXN1-218ENST00000616865 STOML1Q9UBI4 398 aa13.35□□□□□ -0.27
UBXN1-218ENST00000616865 MRPS18CQ9Y3D5 142 aaKnown RBP13.35□□□□□ -0.27
UBXN1-218ENST00000616865 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 TCRBV3S1A0A5B6 114 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 TMEM229AB2RXF0 380 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 HPNP05981 417 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 RAP2AP10114 183 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 EPXP11678 715 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 CXCR1P25024 350 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 SLC1A3P43003 542 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 YAP1P46937 504 aaKnown RBP13.34□□□□□ -0.27
UBXN1-218ENST00000616865 POLR2HP52434 150 aaKnown RBP13.34□□□□□ -0.27
UBXN1-218ENST00000616865 FOXF1Q12946 379 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 CCNIQ14094 377 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 KEAP1Q14145 624 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 NPTX1Q15818 432 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 NSUN5P2Q63ZY6 315 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 AAGABQ6PD74 315 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 GRINAQ7Z429 371 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 BIVMQ86UB2 503 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 PM20D2Q8IYS1 436 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 WFDC11Q8NEX6 87 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 OR4D11Q8NGI4 311 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 OR5M1Q8NGP8 315 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 DNAJA4Q8WW22 397 aaPredicted RBP13.34□□□□□ -0.27
UBXN1-218ENST00000616865 STMN2Q93045 179 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 MRGPRX4Q96LA9 322 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 KLHDC3Q9BQ90 382 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 WFDC6Q9BQY6 131 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 FNDC11Q9BVV2 318 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 AMBRA1Q9C0C7 1298 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 POLR2J2Q9GZM3 115 aaKnown RBP13.34□□□□□ -0.27
UBXN1-218ENST00000616865 POLR2J3Q9H1A7 115 aaKnown RBP13.34□□□□□ -0.27
UBXN1-218ENST00000616865 ENPP4Q9Y6X5 453 aa13.34□□□□□ -0.27
UBXN1-218ENST00000616865 A0A1B0GWA3 101 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 TRAPPC13A5PLN9 417 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 ELOA3DA6NLF2 546 aaPredicted RBP13.33□□□□□ -0.28
UBXN1-218ENST00000616865 B4DXG7 233 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 SHISA8B8ZZ34 492 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 ZIC3O60481 467 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 ADAM11O75078 769 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 ZNF17P17021 662 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 PRKCAP17252 672 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 CCNA2P20248 432 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 APOBEC1P41238 236 aaKnown RBP13.33□□□□□ -0.28
UBXN1-218ENST00000616865 ACTR3P61158 418 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 SORDQ00796 357 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 SF3B4Q15427 424 aaKnown RBP eCLIP13.33□□□□□ -0.281e-7■■□□□ 12
UBXN1-218ENST00000616865 ELOA3BQ3SY89 546 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 NHSL2Q5HYW2 709 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 ALG10BQ5I7T1 473 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 VASNQ6EMK4 673 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 ZNF613Q6PF04 617 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 ULK3Q6PHR2 472 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 KIF18BQ86Y91 864 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 ADGRG5Q8IZF4 528 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 GTPBP8Q8N3Z3 284 aaPredicted RBP13.33□□□□□ -0.28
UBXN1-218ENST00000616865 ATP6V1C2Q8NEY4 427 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 ELOA3Q8NG57 546 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 CANT1Q8WVQ1 401 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 SMPDL3BQ92485 455 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 PRRC1Q96M27 445 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 ZNF347Q96SE7 839 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 PLEKHF2Q9H8W4 249 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 IL1RAPQ9NPH3 570 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 CAMK2AQ9UQM7 478 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 SPIN1Q9Y657 262 aaPredicted RBP13.33□□□□□ -0.28
UBXN1-218ENST00000616865 ABCA2Q9BZC7 2435 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 DOCK7Q96N67 2140 aa13.33□□□□□ -0.28
UBXN1-218ENST00000616865 TMED7-TICAM2A0A0A6YYA0 188 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 OR2M5A3KFT3 312 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 C7orf72A4D263 438 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 MBD3L4A6NDZ8 208 aaPredicted RBP13.32□□□□□ -0.28
UBXN1-218ENST00000616865 MBD3L3A6NE82 208 aaPredicted RBP13.32□□□□□ -0.28
UBXN1-218ENST00000616865 MBD3L5A6NJ08 208 aaPredicted RBP13.32□□□□□ -0.28
UBXN1-218ENST00000616865 CD8B2A6NJW9 211 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 EEF1E1-BLOC1S5C9J1V9 151 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 LINC01387J3KSC0 135 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 EEF1E1O43324 174 aaKnown RBP13.32□□□□□ -0.28
UBXN1-218ENST00000616865 OR5F1O95221 314 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 GOSR1O95249 250 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 MT-ND1P03886 318 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 PNMTP11086 282 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 RHCEP18577 417 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 HTR2AP28223 471 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 ADH6P28332 368 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 TACR3P29371 465 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 SMIM11AP58511 58 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 VLDLRP98155 873 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 LTBQ06643 244 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 LSMEM1Q8N8F7 131 aa13.32□□□□□ -0.28
UBXN1-218ENST00000616865 MBD3L2Q8NHZ7 208 aaPredicted RBP13.32□□□□□ -0.28
UBXN1-218ENST00000616865 LINC01560Q8TB33 94 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms