RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 PRSS50Q9UI38 385 aa16.76■□□□□ 0.27
CDX1-202ENST00000616154 MAGED1Q9Y5V3 778 aaPredicted RBP16.76■□□□□ 0.27
CDX1-202ENST00000616154 A0A1W2PP18 115 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 DPRXA6NFQ7 191 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 ZNF724A8MTY0 619 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 RNF223E7ERA6 249 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 ADAM11O75078 769 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 CRLF1O75462 422 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 FESP07332 822 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 THBS1P07996 1170 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 BMP2P12643 396 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 CDKN1AP38936 164 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 DMTNQ08495 405 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 GTDC1Q4AE62 458 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 SSX8Q7RTT4 187 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 SLC25A43Q8WUT9 341 aaPredicted RBP16.75■□□□□ 0.27
CDX1-202ENST00000616154 VPS33AQ96AX1 596 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 TRIM2Q9C040 744 aa16.75■□□□□ 0.27
CDX1-202ENST00000616154 PAIP1Q9H074 479 aaKnown RBP16.75■□□□□ 0.27
CDX1-202ENST00000616154 QRSL1Q9H0R6 528 aaKnown RBP16.75■□□□□ 0.27
CDX1-202ENST00000616154 THUMPD1Q9NXG2 353 aaKnown RBP16.75■□□□□ 0.27
CDX1-202ENST00000616154 CLDN24A6NM45 220 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 NR5A2O00482 541 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 LYZL6O75951 148 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 COX4I1P13073 169 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 COX5AP20674 150 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 PGGHGQ32M88 737 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 LRIF1Q5T3J3 769 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 SNX32Q86XE0 403 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 DPP10Q8N608 796 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 PNPT1Q8TCS8 783 aaKnown RBP16.74■□□□□ 0.27
CDX1-202ENST00000616154 CMTM5Q96DZ9 223 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 OR5B2Q96R09 309 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 ZNF300Q96RE9 604 aaPredicted RBP16.74■□□□□ 0.27
CDX1-202ENST00000616154 REG4Q9BYZ8 158 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 SLCO5A1Q9H2Y9 848 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 ARL8BQ9NVJ2 186 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 CALML5Q9NZT1 146 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 P2RX2Q9UBL9 471 aa16.74■□□□□ 0.27
CDX1-202ENST00000616154 BBIP1A8MTZ0 92 aa16.73■□□□□ 0.27
CDX1-202ENST00000616154 FBP2O00757 339 aa16.73■□□□□ 0.27
CDX1-202ENST00000616154 DBIP07108 87 aaKnown RBP16.73■□□□□ 0.27
CDX1-202ENST00000616154 TFPTP0C1Z6 253 aa16.73■□□□□ 0.27
CDX1-202ENST00000616154 T-ENOLP0DO92 83 aa16.73■□□□□ 0.27
CDX1-202ENST00000616154 NR2F1P10589 423 aa16.73■□□□□ 0.27
CDX1-202ENST00000616154 EDNRAP25101 427 aa16.73■□□□□ 0.27
CDX1-202ENST00000616154 FKBP2P26885 142 aaKnown RBP16.73■□□□□ 0.27
CDX1-202ENST00000616154 APOBEC1P41238 236 aaKnown RBP16.73■□□□□ 0.27
CDX1-202ENST00000616154 CYLC2Q14093 348 aaPredicted RBP16.73■□□□□ 0.27
CDX1-202ENST00000616154 PPA1Q15181 289 aa16.73■□□□□ 0.27
CDX1-202ENST00000616154 STK11Q15831 433 aa16.73■□□□□ 0.27
CDX1-202ENST00000616154 DNM1P46Q6ZS02 220 aa16.73■□□□□ 0.27
CDX1-202ENST00000616154 GRINAQ7Z429 371 aa16.73■□□□□ 0.27
CDX1-202ENST00000616154 MAPK1IP1LQ8NDC0 245 aa16.73■□□□□ 0.27
CDX1-202ENST00000616154 CNOT9Q92600 299 aaKnown RBP16.73■□□□□ 0.27
CDX1-202ENST00000616154 TRAF4Q9BUZ4 470 aaPredicted RBP16.73■□□□□ 0.27
CDX1-202ENST00000616154 GRIP2Q9C0E4 1043 aa16.73■□□□□ 0.27
CDX1-202ENST00000616154 SERINC1Q9NRX5 453 aa16.73■□□□□ 0.27
CDX1-202ENST00000616154 PCDHB14Q9Y5E9 798 aa16.73■□□□□ 0.27
CDX1-202ENST00000616154 FBN1P35555 2871 aaKnown RBP16.73■□□□□ 0.27
CDX1-202ENST00000616154 MXRA5Q9NR99 2828 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 A0A096LPI6 279 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 CYP7B1O75881 506 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 PGM3O95394 542 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 ANP32DO95626 131 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 IGHV4-39P01824 125 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 ETFAP13804 333 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 IGHV1-2P23083 117 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 ACVR1BP36896 505 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 CLK1P49759 484 aaKnown RBP16.72■□□□□ 0.27
CDX1-202ENST00000616154 DIO1P49895 249 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 CRISP3P54108 245 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 DSTNP60981 165 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 CSNK2A1P68400 391 aaPredicted RBP16.72■□□□□ 0.27
CDX1-202ENST00000616154 MERTKQ12866 999 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 FAPQ12884 760 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 FADDQ13158 208 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 GNA13Q14344 377 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 SYT14P1Q58G82 188 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 TIMM23BQ5SRD1 257 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 C6orf10Q5SRN2 563 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 PRAMEF8Q5VWM4 474 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 PRAMEF7Q5VXH5 474 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 ABLIM2Q6H8Q1 611 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 TMPPEQ6ZT21 453 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 GALNT5Q7Z7M9 940 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 DTX2Q86UW9 622 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 RETREG3Q86VR2 466 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 P2RY8Q86VZ1 359 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 SLC38A5Q8WUX1 472 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 WDR60Q8WVS4 1066 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 MUCL1Q96DR8 90 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 AURKBQ96GD4 344 aaPredicted RBP16.72■□□□□ 0.27
CDX1-202ENST00000616154 CISD1Q9NZ45 108 aaKnown RBP16.72■□□□□ 0.27
CDX1-202ENST00000616154 CHRNA9Q9UGM1 479 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 TAGLN3Q9UI15 199 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 NDUFAF1Q9Y375 327 aa16.72■□□□□ 0.27
CDX1-202ENST00000616154 IGKV3D-15A0A087WSY6 115 aa16.71■□□□□ 0.27
CDX1-202ENST00000616154 TRBV5-3A0A0A0MS03 114 aa16.71■□□□□ 0.27
CDX1-202ENST00000616154 CDHR4A6H8M9 788 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms