RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 SPTSSAQ969W0 71 aa13.68□□□□□ -0.22
SNPH-203ENST00000614659 RELTQ969Z4 430 aa13.68□□□□□ -0.22
SNPH-203ENST00000614659 EGLN3Q9H6Z9 239 aa13.68□□□□□ -0.22
SNPH-203ENST00000614659 AK6Q9Y3D8 172 aaKnown RBP13.68□□□□□ -0.22
SNPH-203ENST00000614659 TFP02787 698 aa13.68□□□□□ -0.22
SNPH-203ENST00000614659 RAB3AP20336 220 aa13.68□□□□□ -0.22
SNPH-203ENST00000614659 CADM4Q8NFZ8 388 aa13.68□□□□□ -0.22
SNPH-203ENST00000614659 OR5T2Q8NGG2 359 aa13.68□□□□□ -0.22
SNPH-203ENST00000614659 LILRB4Q8NHJ6 448 aa13.68□□□□□ -0.22
SNPH-203ENST00000614659 PDXPQ96GD0 296 aa13.68□□□□□ -0.22
SNPH-203ENST00000614659 MKRN2Q9H000 416 aaKnown RBP13.68□□□□□ -0.22
SNPH-203ENST00000614659 FGF21Q9NSA1 209 aa13.68□□□□□ -0.22
SNPH-203ENST00000614659 USP36Q9P275 1121 aaKnown RBP13.68□□□□□ -0.22
SNPH-203ENST00000614659 CA5BQ9Y2D0 317 aa13.68□□□□□ -0.22
SNPH-203ENST00000614659 A0A0G2JMP0 313 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 TMEM129A0AVI4 362 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 H0YGG7 62 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 GOSR2O14653 212 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 MBTPS2O43462 519 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 SRYQ05066 204 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 C11orf91Q3C1V1 193 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 GTPBP8Q8N3Z3 284 aaPredicted RBP13.67□□□□□ -0.22
SNPH-203ENST00000614659 ZNF709Q8N972 641 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 SIMC1Q8NDZ2 872 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 OR4M2Q8NGB6 313 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 SGPP1Q9BX95 441 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 CDCA4Q9BXL8 241 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 UNKLQ9H9P5 680 aaKnown RBP13.67□□□□□ -0.22
SNPH-203ENST00000614659 FBXO8Q9NRD0 319 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 MRPL15Q9P015 296 aaKnown RBP13.67□□□□□ -0.22
SNPH-203ENST00000614659 OR5K3A6NET4 321 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 B8ZZF3 427 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 LDB3O75112 727 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 DIRAS3O95661 229 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 EVI2BP34910 448 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 CAMK2DQ13557 499 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 PTPRRQ15256 657 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 LNX2Q8N448 690 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 OR7G1Q8NGA0 311 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 OR52I1Q8NGK6 324 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 OR51Q1Q8NH59 317 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 GIMAP5Q96F15 307 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 MSLNLQ96KJ4 702 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 CNTNAP3BQ96NU0 1288 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 PPA2Q9H2U2 334 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 LY75O60449 1722 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 F8W036 122 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 P2RX6O15547 441 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 ARRB2P32121 409 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 BLOC1S1P78537 153 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 NKAPLQ5M9Q1 402 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 CYHR1Q6ZMK1 362 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 OR7G2Q8NG99 324 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 OR14K1Q8NGZ2 314 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 ARL11Q969Q4 196 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 OR5B12Q96R08 314 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 ZNF701Q9NV72 531 aaPredicted RBP13.67□□□□□ -0.22
SNPH-203ENST00000614659 SHISA7A6NL88 538 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 SCGB2A1O75556 95 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 POLR2IP36954 125 aaKnown RBP13.67□□□□□ -0.22
SNPH-203ENST00000614659 ERVK-25P63136 954 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 FCRLBQ6BAA4 426 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 WDR88Q6ZMY6 472 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 OR4F15Q8NGB8 312 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 RADILQ96JH8 1075 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 COQ3Q9NZJ6 369 aa13.67□□□□□ -0.22
SNPH-203ENST00000614659 A0A1W2PPC4 97 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 IFNA5P01569 189 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 SLC35E2P0CK97 266 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 NIPSNAP1Q9BPW8 284 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 TMEM121BQ9BXQ6 578 aaPredicted RBP13.66□□□□□ -0.22
SNPH-203ENST00000614659 HHLA2Q9UM44 414 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 TRAV27A0A087WT01 109 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 SLC43A1O75387 559 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 RAB3DO95716 219 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 PEX11BO96011 259 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 EXOSC7Q15024 291 aaKnown RBP13.66□□□□□ -0.22
SNPH-203ENST00000614659 LEXMQ3ZCV2 418 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 Q6ZPB1 254 aaPredicted RBP13.66□□□□□ -0.22
SNPH-203ENST00000614659 RPL3LQ92901 407 aaKnown RBP13.66□□□□□ -0.22
SNPH-203ENST00000614659 SYT3Q9BQG1 590 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 C6orf106Q9H6K1 298 aaPredicted RBP13.66□□□□□ -0.22
SNPH-203ENST00000614659 RBFOX1Q9NWB1 397 aaKnown RBP13.66□□□□□ -0.22
SNPH-203ENST00000614659 TMEM212A6NML5 194 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 LINC01565O15544 149 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 PLRG1O43660 514 aaKnown RBP13.66□□□□□ -0.22
SNPH-203ENST00000614659 IFNA17P01571 189 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 APLNRP35414 380 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 RPS25P62851 125 aaKnown RBP13.66□□□□□ -0.22
SNPH-203ENST00000614659 MFSD12Q6NUT3 480 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 DPY19L2P2Q6ZN68 376 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 NANOGP1Q8N7R0 232 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 ZNF454Q8N9F8 522 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 DOK4Q8TEW6 326 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 ELMOD3Q96FG2 381 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 TXNDC15Q96J42 360 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 ELF4Q99607 663 aaPredicted RBP13.66□□□□□ -0.22
SNPH-203ENST00000614659 CDX2Q99626 313 aaPredicted RBP13.66□□□□□ -0.22
SNPH-203ENST00000614659 DUSP21Q9H596 190 aa13.66□□□□□ -0.22
SNPH-203ENST00000614659 NRIP3Q9NQ35 241 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms