RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 NOX4Q9NPH5 578 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 ADAM18Q9Y3Q7 739 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 NPFFR2Q9Y5X5 522 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 ANKRD34BA5PLL1 514 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 SERINC4A6NH21 518 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 NPIPA5E9PKD4 350 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 SPINT1O43278 529 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 CTSVO60911 334 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 GATBO75879 557 aaKnown RBP8.02□□□□□ -1.13
LIG4-204ENST00000611712 SSTR2P30874 369 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 GDNFP39905 211 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 LBX1P52954 281 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 NSDHLQ15738 373 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 GFOD2Q3B7J2 385 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 CCDC157Q569K6 752 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 LRFN4Q6PJG9 635 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 PRSS45Q7RTY3 260 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 FRMD1Q8N878 549 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 LSM14AQ8ND56 463 aaKnown RBP8.02□□□□□ -1.13
LIG4-204ENST00000611712 ADAMTS18Q8TE60 1221 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 THAP3Q8WTV1 239 aaPredicted RBP8.02□□□□□ -1.13
LIG4-204ENST00000611712 CCDC107Q8WV48 283 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 RASD2Q96D21 266 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 OR2M2Q96R28 347 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 NRIP3Q9NQ35 241 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 LHX9Q9NQ69 397 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 UBQLN2Q9UHD9 624 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 ACAD8Q9UKU7 415 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 NPIPA1Q9UND3 350 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 FARSAQ9Y285 508 aaKnown RBP8.02□□□□□ -1.13
LIG4-204ENST00000611712 ZNF281Q9Y2X9 895 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 DOCK6Q96HP0 2047 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 UTRNP46939 3433 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 TRAV18A0A075B6X5 111 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 PRAMEF27A3QJZ7 478 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 H7C1C5 153 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 CDC40O60508 579 aaKnown RBP eCLIP8.01□□□□□ -1.13
LIG4-204ENST00000611712 SDC3O75056 442 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 HIST1H1CP16403 213 aaKnown RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 S1PR1P21453 382 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 TPMTP51580 245 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 NR0B1P51843 470 aaKnown RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 LCN6P62502 163 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 DBPQ10586 325 aaPredicted RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 FGL2Q14314 439 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 ZNF79Q15937 498 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 MAPK14Q16539 360 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 HACD4Q5VWC8 232 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 MRM1Q6IN84 353 aaKnown RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 ESPNLQ6ZVH7 1005 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 KLHL15Q96M94 604 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 FOXN4Q96NZ1 517 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 RPP25Q9BUL9 199 aaKnown RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 CRISPLD2Q9H0B8 497 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 MIXL1Q9H2W2 232 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 UBQLN4Q9NRR5 601 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 MAN2C1Q9NTJ4 1040 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 FBXO34Q9NWN3 711 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 A0A0B4J203 849 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 A0A1B0GVI7 797 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 CDC14CA4D256 554 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 TNFRSF10CO14798 259 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 P2RX6O15547 441 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 SELENOFO60613 162 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 GALR3O60755 368 aaPredicted RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 EIF4EP06730 217 aaKnown RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 PGCP20142 388 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 BDH1Q02338 343 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 TCTE1Q5JU00 501 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 GLT8D1Q68CQ7 371 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 WBP2NLQ6ICG8 309 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 DNM1P34Q6PK57 102 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 TMEM184AQ6ZMB5 413 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 SLC35F3Q8IY50 421 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 OR2L13Q8N349 312 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 C19orf47Q8N9M1 422 aaKnown RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 GPR148Q8TDV2 347 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 GIMAP1Q8WWP7 306 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 RSC1A1Q92681 617 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 THRSPQ92748 146 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 DAZLQ92904 295 aaKnown RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 MSANTD3Q96H12 275 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 Q96M85 177 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 ORAI3Q9BRQ5 295 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 PLA2G2FQ9BZM2 168 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 C8orf33Q9H7E9 229 aaPredicted RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 SEC61A2Q9H9S3 476 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 IFT46Q9NQC8 304 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 WSB2Q9NYS7 404 aaPredicted RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 SERTAD3Q9UJW9 196 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 PLCL2Q9UPR0 1127 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 DHDHQ9UQ10 334 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 LSM2Q9Y333 95 aaKnown RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 PTPRDP23468 1912 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 DSPPQ9NZW4 1301 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 IGKV1-8A0A0C4DH67 115 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 HYAL3O43820 417 aaPredicted RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 TFP02787 698 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 MAOAP21397 527 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 C1orf189Q5VU69 101 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms