RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ANGPTL4Q9BY76 406 aa19.58■□□□□ 0.72
USP6NL-204ENST00000606752 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.58■□□□□ 0.72
USP6NL-204ENST00000606752 INMTO95050 263 aa19.57■□□□□ 0.72
USP6NL-204ENST00000606752 RPS5P46782 204 aaKnown RBP19.57■□□□□ 0.72
USP6NL-204ENST00000606752 TBCEQ15813 527 aaPredicted RBP19.57■□□□□ 0.72
USP6NL-204ENST00000606752 ACER2Q5QJU3 275 aa19.57■□□□□ 0.72
USP6NL-204ENST00000606752 PRAMEF20Q5VT98 475 aa19.57■□□□□ 0.72
USP6NL-204ENST00000606752 NXNL2Q5VZ03 156 aa19.57■□□□□ 0.72
USP6NL-204ENST00000606752 SLC22A10Q63ZE4 541 aa19.57■□□□□ 0.72
USP6NL-204ENST00000606752 B3GNTL1Q67FW5 361 aaPredicted RBP19.57■□□□□ 0.72
USP6NL-204ENST00000606752 JMJD6Q6NYC1 403 aaPredicted RBP19.57■□□□□ 0.72
USP6NL-204ENST00000606752 DPY19L2P2Q6ZN68 376 aa19.57■□□□□ 0.72
USP6NL-204ENST00000606752 WDSUB1Q8N9V3 476 aa19.57■□□□□ 0.72
USP6NL-204ENST00000606752 OR2M3Q8NG83 312 aa19.57■□□□□ 0.72
USP6NL-204ENST00000606752 STK35Q8TDR2 534 aa19.57■□□□□ 0.72
USP6NL-204ENST00000606752 FKRPQ9H9S5 495 aa19.57■□□□□ 0.72
USP6NL-204ENST00000606752 GPN2Q9H9Y4 310 aaPredicted RBP19.57■□□□□ 0.72
USP6NL-204ENST00000606752 HINT3Q9NQE9 182 aaKnown RBP19.57■□□□□ 0.72
USP6NL-204ENST00000606752 MRPS18AQ9NVS2 196 aaKnown RBP19.57■□□□□ 0.72
USP6NL-204ENST00000606752 H2AFY2Q9P0M6 372 aaPredicted RBP19.57■□□□□ 0.72
USP6NL-204ENST00000606752 ZNF229Q9UJW7 825 aa19.57■□□□□ 0.72
USP6NL-204ENST00000606752 HIF3AQ9Y2N7 669 aa19.57■□□□□ 0.72
USP6NL-204ENST00000606752 CNOT1A5YKK6 2376 aaKnown RBP19.57■□□□□ 0.72
USP6NL-204ENST00000606752 CUL9Q8IWT3 2517 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 ZC3H12DA2A288 527 aaKnown RBP19.56■□□□□ 0.72
USP6NL-204ENST00000606752 CCL3P10147 92 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 NOS3P29474 1203 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 ZNF41P51814 821 aaPredicted RBP19.56■□□□□ 0.72
USP6NL-204ENST00000606752 IRF3Q14653 427 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 INPP5JQ15735 1006 aaPredicted RBP19.56■□□□□ 0.72
USP6NL-204ENST00000606752 SLC25A53Q5H9E4 307 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 ZNF362Q5T0B9 420 aaPredicted RBP19.56■□□□□ 0.72
USP6NL-204ENST00000606752 ARHGAP11AQ6P4F7 1023 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 IGF2-ASQ6U949 168 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 C5orf46Q6UWT4 87 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 TMPRSS7Q7RTY8 843 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 CLVS1Q8IUQ0 354 aaPredicted RBP19.56■□□□□ 0.72
USP6NL-204ENST00000606752 CPOQ8IVL8 374 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 PSMF1Q92530 271 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 FCGR1BQ92637 280 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 NTNG2Q96CW9 530 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 TMEM80Q96HE8 168 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 ASCL3Q9NQ33 180 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 VDAC3Q9Y277 283 aa19.56■□□□□ 0.72
USP6NL-204ENST00000606752 RIIAD1A6NNX1 92 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 MCIDASD6RGH6 385 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 BLOC1S5-TXNDC5H3BN57 136 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 MT-ATP6P00846 226 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 BGLAPP02818 100 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 HIST1H2ABP04908 130 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 HK1P19367 917 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 RPL4P36578 427 aaKnown RBP19.55■□□□□ 0.72
USP6NL-204ENST00000606752 GP2P55259 537 aaKnown RBP19.55■□□□□ 0.72
USP6NL-204ENST00000606752 CNPY1Q3B7I2 92 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 KLHL22Q53GT1 634 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 SYT6Q5T7P8 510 aaPredicted RBP19.55■□□□□ 0.72
USP6NL-204ENST00000606752 ZNF468Q5VIY5 522 aaPredicted RBP19.55■□□□□ 0.72
USP6NL-204ENST00000606752 UBE2UQ5VVX9 321 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 C1QL3Q5VWW1 255 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 HIST3H2AQ7L7L0 130 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 CXXC5Q7LFL8 322 aaKnown RBP19.55■□□□□ 0.72
USP6NL-204ENST00000606752 FADS6Q8N9I5 356 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 C9orf43Q8TAL5 461 aaPredicted RBP19.55■□□□□ 0.72
USP6NL-204ENST00000606752 HIST1H2ACQ93077 130 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 KIAA1143Q96AT1 154 aaPredicted RBP19.55■□□□□ 0.72
USP6NL-204ENST00000606752 THOC3Q96J01 351 aaKnown RBP19.55■□□□□ 0.72
USP6NL-204ENST00000606752 MRGPRX4Q96LA9 322 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 ERMAPQ96PL5 475 aaPredicted RBP19.55■□□□□ 0.72
USP6NL-204ENST00000606752 GPX7Q96SL4 187 aaPredicted RBP19.55■□□□□ 0.72
USP6NL-204ENST00000606752 PTGES2Q9H7Z7 377 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 CHRNA9Q9UGM1 479 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 RSL24D1Q9UHA3 163 aaKnown RBP19.55■□□□□ 0.72
USP6NL-204ENST00000606752 COMMD3-BMI1R4GMX3 469 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 PCSK5Q92824 1860 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 ANKRD33BA6NCL7 494 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 ACVR2AP27037 513 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 MTNR1AP48039 350 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 MAP2K6P52564 334 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 CDH11P55287 796 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 DCAF10Q5QP82 559 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 FAM69AQ5T7M9 428 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 C1orf140Q5VVS0 124 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 IGFN1Q86VF2 1251 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 OR4K17Q8NGC6 315 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 NPAS1Q99742 590 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 PTDSS2Q9BVG9 487 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 PROK2Q9HC23 129 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 NRIP3Q9NQ35 241 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 FBXL2Q9UKC9 423 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 IER3IP1Q9Y5U9 82 aa19.55■□□□□ 0.72
USP6NL-204ENST00000606752 IRGMA1A4Y4 181 aa19.54■□□□□ 0.72
USP6NL-204ENST00000606752 ARPC3O15145 178 aa19.54■□□□□ 0.72
USP6NL-204ENST00000606752 IFNGP01579 166 aa19.54■□□□□ 0.72
USP6NL-204ENST00000606752 TSPAN19P0C672 248 aa19.54■□□□□ 0.72
USP6NL-204ENST00000606752 AQP2P41181 271 aa19.54■□□□□ 0.72
USP6NL-204ENST00000606752 FOXF1Q12946 379 aa19.54■□□□□ 0.72
USP6NL-204ENST00000606752 PLPPR5Q32ZL2 321 aa19.54■□□□□ 0.72
USP6NL-204ENST00000606752 GXYLT1Q4G148 440 aa19.54■□□□□ 0.72
USP6NL-204ENST00000606752 GPR107Q5VW38 600 aa19.54■□□□□ 0.72
USP6NL-204ENST00000606752 PLBD1Q6P4A8 553 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms