RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 RRADP55042 308 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SH3BGRP55822 239 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 Q0VFX4 171 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ATP1A4Q13733 1029 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 IRF3Q14653 427 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.15□□□□□ -0.621e-17■■□□□ 12.3
NEDD8-MDP1-203ENST00000604306 PLPPR5Q32ZL2 321 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ACER2Q5QJU3 275 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 DCAF10Q5QP82 559 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 AADACL4Q5VUY2 407 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 UBE2UQ5VVX9 321 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ISLR2Q6UXK2 745 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 AHSA2Q719I0 299 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ASCL5Q7RTU5 278 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 MAMDC2Q7Z304 686 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ADGRG3Q86Y34 549 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PLCZ1Q86YW0 608 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 STX19Q8N4C7 294 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 IQCF1Q8N6M8 205 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SCAIQ8N9R8 606 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ANKK1Q8NFD2 765 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 OR13F1Q8NGS4 319 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PSMF1Q92530 271 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 C1GALT1C1Q96EU7 318 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ZNF582Q96NG8 517 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SNX18Q96RF0 628 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 LHPPQ9H008 270 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 NRIP3Q9NQ35 241 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SACM1LQ9NTJ5 587 aa11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 MRPS18CQ9Y3D5 142 aaKnown RBP11.15□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TRAV27A0A087WT01 109 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 NPIPB13A6NJU9 1138 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 RIIAD1A6NNX1 92 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 NPIPB4C9JG80 1138 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MAN1A2O60476 641 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 AHSA1O95433 338 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CH25HO95992 272 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 HIST1H2ABP04908 130 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CELA2AP08217 269 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ZNF3P17036 446 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PAICSP22234 425 aaKnown RBP11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ACVR2AP27037 513 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 DCKP27707 260 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 HTR1FP30939 366 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CASRP41180 1078 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 EMX1Q04741 257 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ZNF91Q05481 1191 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ST3GAL4Q11206 333 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 RAB39AQ14964 217 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TOMM34Q15785 309 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SGCBQ16585 318 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CLEC12AQ5QGZ9 265 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SYT6Q5T7P8 510 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 C1orf140Q5VVS0 124 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 GPR139Q6DWJ6 353 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 C3orf33Q6P1S2 294 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 IL20RBQ6UXL0 311 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 THSD4Q6ZMP0 1018 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 HIST3H2AQ7L7L0 130 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CLEC1AQ8NC01 280 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ADPRHL1Q8NDY3 354 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 OR4K17Q8NGC6 315 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 OR5M3Q8NGP4 307 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MFSD8Q8NHS3 518 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 RORBQ92753 470 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 HIST1H2ACQ93077 130 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 DDIT4LQ96D03 193 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TNFRSF13CQ96RJ3 184 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 IL4I1Q96RQ9 567 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 IFT27Q9BW83 186 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 RNF32Q9H0A6 362 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 GALNT9Q9HCQ5 603 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 FGF20Q9NP95 211 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 FANCFQ9NPI8 374 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ACOT13Q9NPJ3 140 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SERINC1Q9NRX5 453 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 HAO2Q9NYQ3 351 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ERVK-18Q9QC07 812 aa11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 WARS2Q9UGM6 360 aaKnown RBP11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 DIMT1Q9UNQ2 313 aaKnown RBP11.14□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SPEGQ15772 3267 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 TMEM72A0PK05 275 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SLC22A31A6NKX4 558 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ZNF99A8MXY4 864 aaPredicted RBP11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 IGHMP01871 453 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MT-ND2P03891 347 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 P04436 131 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CD14P08571 375 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 LIFP15018 202 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 MTNR1AP48039 350 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CYB561P49447 251 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 DSCR4P56555 118 aaPredicted RBP11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ZP4Q12836 540 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 POU4F2Q12837 409 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 SELENBP1Q13228 472 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 PMS2P3Q13401 168 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 CXXC5Q7LFL8 322 aaKnown RBP11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 ZNF367Q7RTV3 350 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 NANOGNBQ7Z5D8 188 aa11.13□□□□□ -0.63
NEDD8-MDP1-203ENST00000604306 GTPBP8Q8N3Z3 284 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms