RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 RCBTB1Q8NDN9 531 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 LMF2Q9BU23 707 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 SLCO1C1Q9NYB5 712 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 WSB2Q9NYS7 404 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 UCHL1P09936 223 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 ANKRD34CP0C6C1 535 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 EN2P19622 333 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 CXCL3P19876 107 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 EDNRAP25101 427 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 CAPZA2P47755 286 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 TPMTP51580 245 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 CDONQ4KMG0 1287 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 MANEAQ5SRI9 462 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 SYS1Q8N2H4 156 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 OR13H1Q8NG92 308 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 OR51Q1Q8NH59 317 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 RIT1Q92963 219 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 VSTM2LQ96N03 204 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 DERL3Q96Q80 235 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 CACNG6Q9BXT2 260 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 ABRACLQ9P1F3 81 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 HCN3Q9P1Z3 774 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 RPS6KB2Q9UBS0 482 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 NUBP2Q9Y5Y2 271 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 TDRD6O60522 2096 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 PSMD9O00233 223 aa18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 ARL6IP5O75915 188 aa18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 MT-ND4P03905 459 aa18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 ADRB1P08588 477 aa18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 ST6GAL1P15907 406 aa18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 UBE2IP63279 158 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 HACD4Q5VWC8 232 aa18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 SLC22A18ASQ8N1D0 253 aa18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 POMGNT2Q8NAT1 580 aa18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 OR6K6Q8NGW6 343 aa18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 LGALS14Q8TCE9 139 aa18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 SGTBQ96EQ0 304 aa18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 GAS2L1Q99501 681 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 AUNIPQ9H7T9 357 aa18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 POT1Q9NUX5 634 aa18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 MPDZO75970 2070 aa18.55■□□□□ 0.56
SHKBP1-225ENST00000600733 A0A0A6YYC8 382 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 IDSB3KWA1 339 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 I3L1I5 382 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 SERPINI2O75830 405 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 GRPRP30550 384 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 ERV3-1Q14264 604 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 GGTLC2Q14390 218 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 FGFBP1Q14512 234 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 PON3Q15166 354 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 TMEM92Q6UXU6 159 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 NPEPL1Q8NDH3 523 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 ZNF671Q8TAW3 534 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 RASD2Q96D21 266 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 MS4A3Q96HJ5 214 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 OR51J1Q9H342 316 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 ZFP64Q9NPA5 681 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 MKKSQ9NPJ1 570 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 LRIT1Q9P2V4 623 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 NCDNQ9UBB6 729 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 EML5Q05BV3 1969 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 OR6C68A6NDL8 312 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 MAGEB1P43366 347 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 GAS6Q14393 721 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 RPL22L1Q6P5R6 122 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 BEST4Q8NFU0 473 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 OR4C3Q8NH37 302 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 OR14A16Q8NHC5 309 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 RBM18Q96H35 190 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 ZCCHC4Q9H5U6 513 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 TEKT2Q9UIF3 430 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 GON4LQ3T8J9 2241 aa18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 TP53BP1Q12888 1972 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-225ENST00000600733 C4orf47A7E2U8 309 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 FAM171A2A8MVW0 826 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 IFI6P09912 130 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 DIO1P49895 249 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 PITPNAQ00169 270 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 HSD17B12Q53GQ0 312 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 ZNF550Q7Z398 422 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 ZNF687Q8N1G0 1237 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 HSPA12BQ96MM6 686 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 LMAN2LQ9H0V9 348 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 C2orf42Q9NWW7 574 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 STMN3Q9NZ72 180 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 MGAT4AQ9UM21 535 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 SPATA2Q9UM82 520 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 WNT1P04628 370 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 SPI1P17947 270 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 AKT2P31751 481 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 ERVK-25P63136 954 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 MAT1AQ00266 395 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 STX4Q12846 297 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 ZNF267Q14586 743 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 ZNF141Q15928 474 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 ZNF767PQ75MW2 155 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 SLC43A2Q8N370 569 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 GPBAR1Q8TDU6 330 aa18.53■□□□□ 0.56
SHKBP1-225ENST00000600733 GCDHQ92947 438 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms