RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 MRPL2Q5T653 305 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 TSPO2Q5TGU0 170 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 OR7E24Q6IFN5 339 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 WDR93Q6P2C0 686 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 CLEC2AQ6UVW9 174 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 LRRC74BQ6ZQY2 392 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 SSX8Q7RTT4 187 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 AAED1Q7RTV5 226 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 GPAT4Q86UL3 456 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 TMEM99Q8N816 258 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 WDR31Q8NA23 367 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 PMM1Q92871 262 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 REPIN1Q9BWE0 567 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 PARD6BQ9BYG5 372 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 AIG1Q9NVV5 245 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 RLIMQ9NVW2 624 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 PARPBPQ9NWS1 579 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 TRAPPC4Q9Y296 219 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 SLC9A8Q9Y2E8 581 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 FLVCR1Q9Y5Y0 555 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 ANK3Q12955 4377 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 DNPH1O43598 174 aa15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 EIF1BO60739 113 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 KRT33AO76009 404 aa15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 PGRP06401 933 aa15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 DBIP07108 87 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 SLC1A3P43003 542 aa15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 SLC16A1P53985 500 aa15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 SPATA19Q7Z5L4 167 aa15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 VRK2Q86Y07 508 aa15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 PEX5LQ8IYB4 626 aa15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 OIT3Q8WWZ8 545 aa15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 MUS81Q96NY9 551 aa15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 MANSC1Q9H8J5 431 aa15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 SSU72Q9NP77 194 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 ADPRHL2Q9NX46 363 aa15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 MALT1Q9UDY8 824 aa15.43■□□□□ 0.06
SHKBP1-223ENST00000600552 RNF212BA8MTL3 300 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 A8MV72 311 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 RFXANKO14593 260 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 TLX2O43763 284 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 SNUPNO95149 360 aaKnown RBP15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 ANP32DO95626 131 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 KRT75O95678 551 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 NCF2P19878 526 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 CRATP43155 626 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 SLC25A3Q00325 362 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 EPS8Q12929 822 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 KLHL24Q6TFL4 600 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 CMIPQ8IY22 773 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 KIRREL3Q8IZU9 778 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 MREGQ8N565 214 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 ZNF525Q8N782 197 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 OR52P1PQ8NH57 321 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 AURKBQ96GD4 344 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 FKRPQ9H9S5 495 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 SLC17A5Q9NRA2 495 aa15.42■□□□□ 0.06
SHKBP1-223ENST00000600552 COL6A5A8TX70 2615 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 ATRQ13535 2644 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 ATP6V1G2-DDX39BF2Z307 99 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 ZNF208O43345 1280 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 LY6HO94772 140 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 GPIP06744 558 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 ETFAP13804 333 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 COPZ1P61923 177 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 H3F3AP84243 136 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 TGFBR3Q03167 851 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 SLC17A1Q14916 467 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 HIKESHIQ53FT3 197 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 RPS26P11Q5JNZ5 115 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 TMEM225Q6GV28 225 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 C11orf71Q6IPW1 123 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 OGFOD2Q6N063 350 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 ZNF836Q6ZNA1 936 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 DNM1P46Q6ZS02 220 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 OR9K2Q8NGE7 335 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 FBXO17Q96EF6 278 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 ZNF385AQ96PM9 386 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 TAPBPLQ9BX59 468 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 GRIP2Q9C0E4 1043 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 SLC6A13Q9NSD5 602 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 HAO1Q9UJM8 370 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 AMDHD2Q9Y303 409 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 GPR45Q9Y5Y3 372 aa15.41■□□□□ 0.06
SHKBP1-223ENST00000600552 TRPC5OSA6NMA1 111 aa15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 SLC22A3O75751 556 aa15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 IFNA2P01563 188 aa15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 BCHEP06276 602 aa15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 THBS1P07996 1170 aa15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 PRPS1P60891 318 aa15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 CHRNB3Q05901 458 aa15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 LGALS3BPQ08380 585 aa15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 CARTPTQ16568 116 aa15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 CHRFAM7AQ494W8 412 aa15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 PAQR6Q6TCH4 344 aa15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 FAM168AQ92567 244 aa15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 KCNK17Q96T54 332 aa15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 CACYBPQ9HB71 228 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 P2RX2Q9UBL9 471 aa15.4■□□□□ 0.06
SHKBP1-223ENST00000600552 DCTN4Q9UJW0 460 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms