RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 NSDHLQ15738 373 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 CD226Q15762 336 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 CEP78Q5JTW2 689 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 GPR135Q8IZ08 494 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 SLC38A6Q8IZM9 456 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 OR8H3Q8N146 312 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 YIPF7Q8N8F6 280 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 OR6C4Q8NGE1 309 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 OR8K3Q8NH51 312 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 MOSPD2Q8NHP6 518 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 TRIM63Q969Q1 353 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 SLC25A18Q9H1K4 315 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 CMC2Q9NRP2 79 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 ZNF223Q9UK11 482 aaPredicted RBP10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 SF3B6Q9Y3B4 125 aaKnown RBP10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 RTTNQ86VV8 2226 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 DENND4AQ7Z401 1863 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 DMDP11532 3685 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 CPED1A4D0V7 1026 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 RAD1O60671 282 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 TOXO94900 526 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 HLA-DQA2P01906 255 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 ATF4P18848 351 aaPredicted RBP10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 EDNRAP25101 427 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 TALDO1P37837 337 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 SOX2P48431 317 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 LEG1Q6P5S2 330 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 NOXA1Q86UR1 476 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 TMEM151BQ8IW70 566 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 OR5H6Q8NGV6 325 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 ZNF671Q8TAW3 534 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 GHSRQ92847 366 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 Q96M85 177 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 CCDC32Q9BV29 185 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 FSCN3Q9NQT6 498 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 ING1Q9UK53 422 aaPredicted RBP10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 IKZF2Q9UKS7 526 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 TMEM5Q9Y2B1 443 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 AK6Q9Y3D8 172 aaKnown RBP10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 ATG2AQ2TAZ0 1938 aa10.59□□□□□ -0.71
ARHGEF1-220ENST00000600274 A0A0G2JMP0 313 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 TEX13CA0A0J9YWL9 993 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 A0A0X1KG70 313 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 SERINC4A6NH21 518 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 SHISA7A6NL88 538 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 CHURC1-FNTBB4DL54 471 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 H3BUI4 141 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 SCDO00767 359 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 TSPAN4O14817 238 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 KLF4O43474 513 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 CDC40O60508 579 aaKnown RBP eCLIP10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 RGS9O75916 674 aaPredicted RBP10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 GPANK1O95872 356 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 DCNP07585 359 aaKnown RBP10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 CT45A8P0DMV1 189 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 CT45A9P0DMV2 189 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 ACAA2P42765 397 aaKnown RBP10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 FNTBP49356 437 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 ATP12AP54707 1039 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 BCL2A1Q16548 175 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 CT45A2Q5DJT8 189 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 GARNL3Q5VVW2 1013 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 TSSK4Q6SA08 328 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 TMEM91Q6ZNR0 172 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 LNX2Q8N448 690 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 OR4M2Q8NGB6 313 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 BRIX1Q8TDN6 353 aaKnown RBP10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 CCDC120Q96HB5 630 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 VSTM2LQ96N03 204 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 MESP1Q9BRJ9 268 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 MKL2Q9ULH7 1088 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 SPATA2Q9UM82 520 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 SATB2Q9UPW6 733 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 POLR1CO15160 346 aaPredicted RBP10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 AK1P00568 194 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 NAT2P11245 290 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 PEPDP12955 493 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 TDGQ13569 410 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 PON3Q15166 354 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 ARHGAP40Q5TG30 622 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 LCN1P1Q5VSP4 162 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 ULK3Q6PHR2 472 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 UBQLNLQ8IYU4 475 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 ZNRF4Q8WWF5 429 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 DEDD2Q8WXF8 326 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 PIGKQ92643 395 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 TCTN2Q96GX1 697 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 GAL3ST1Q99999 423 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 MCCC2Q9HCC0 563 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 STMN3Q9NZ72 180 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 MRPL15Q9P015 296 aaKnown RBP10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 PLCL2Q9UPR0 1127 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 SDK2Q58EX2 2172 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 IQCMA0A1B0GVH7 501 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 TRDV1A0A1B0GX56 115 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 NDUFB2O95178 105 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 S1PR1P21453 382 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 GRK6P43250 576 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 RFX2P48378 723 aa10.58□□□□□ -0.72
ARHGEF1-220ENST00000600274 LIMK1P53667 647 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms