RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 MAGEA8P43361 318 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 COMPP49747 757 aaPredicted RBP5.3□□□□□ -1.56
VRK3-220ENST00000600259 IDH3GP51553 393 aaPredicted RBP5.3□□□□□ -1.56
VRK3-220ENST00000600259 CDH15P55291 814 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 CLDN8P56748 225 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 SLC35A1P78382 337 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 KCNJ10P78508 379 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 NAAAQ02083 359 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 TGFBR3Q03167 851 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 LGALS3BPQ08380 585 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 MSMPQ1L6U9 139 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 C3orf36Q3SXR2 165 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 TBRG1Q3YBR2 411 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 FAM174BQ3ZCQ3 159 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 IQCCQ4KMZ1 466 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 ATP6AP1LQ52LC2 224 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 PAQR6Q6TCH4 344 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 CASP12Q6UXS9 341 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 CLECL1Q8IZS7 167 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 CNPY4Q8N129 248 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 ZNF786Q8N393 782 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 TMEM99Q8N816 258 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 FAM169BQ8N8A8 192 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 ZNF540Q8NDQ6 660 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 SEMA6DQ8NFY4 1073 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 MAGEE2Q8TD90 523 aaPredicted RBP5.3□□□□□ -1.56
VRK3-220ENST00000600259 HPS1Q92902 700 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 RAB8BQ92930 207 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 ZHX1-C8orf76Q96EF9 292 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 PPP3R2Q96LZ3 170 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 SLC38A2Q96QD8 506 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 VRK1Q99986 396 aaPredicted RBP5.3□□□□□ -1.56
VRK3-220ENST00000600259 C1orf50Q9BV19 199 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 DUSP26Q9BV47 211 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 KATNB1Q9BVA0 655 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 RACGAP1Q9H0H5 632 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 OR51I1Q9H343 314 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 PIF1Q9H611 641 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 SEC61A2Q9H9S3 476 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 MYOZ1Q9NP98 299 aaPredicted RBP5.3□□□□□ -1.56
VRK3-220ENST00000600259 OBP2BQ9NPH6 170 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 EXOSC3Q9NQT5 275 aaKnown RBP5.3□□□□□ -1.56
VRK3-220ENST00000600259 CA10Q9NS85 328 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 UPB1Q9UBR1 384 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 ZDHHC2Q9UIJ5 367 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 SLC35A3Q9Y2D2 325 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 SLC9A8Q9Y2E8 581 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 TMED7Q9Y3B3 224 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 FKBP7Q9Y680 259 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 ARPC4-TTLL3A0A0A6YYG9 625 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 A0A0A6YYJ9 748 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 TMEM89A2RUT3 159 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 LIPT2A6NK58 231 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 SLCO1B7G3V0H7 640 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 FAAHO00519 579 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 CFLARO15519 480 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 NPHS1O60500 1241 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 EIF1BO60739 113 aaKnown RBP5.29□□□□□ -1.56
VRK3-220ENST00000600259 LGI1O95970 557 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 WNT11O96014 354 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 CHEK2O96017 543 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 IGKV3-15P01624 115 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 CECR9P0C854 216 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 G6PDP11413 515 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 DAOP14920 347 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 CCNA2P20248 432 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 MAPK1P28482 360 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 ALDH3A1P30838 453 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 THBS4P35443 961 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 IDH2P48735 452 aaKnown RBP5.29□□□□□ -1.56
VRK3-220ENST00000600259 KHKP50053 298 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 PPOXP50336 477 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 DVL1P1P54792 670 aaPredicted RBP5.29□□□□□ -1.56
VRK3-220ENST00000600259 SNRPD2P62316 118 aaKnown RBP5.29□□□□□ -1.56
VRK3-220ENST00000600259 TRIP10Q15642 601 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 MAPK11Q15759 364 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 CARTPTQ16568 116 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 SPDYE7PQ495Y7 208 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 SAXO2Q658L1 398 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 OR4F3Q6IEY1 312 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 BHLHB9Q6PI77 547 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 C1orf229Q6ZS94 237 aaPredicted RBP5.29□□□□□ -1.56
VRK3-220ENST00000600259 AAED1Q7RTV5 226 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 HMGN2P46Q86SG4 172 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 MYPOPQ86VE0 399 aaPredicted RBP5.29□□□□□ -1.56
VRK3-220ENST00000600259 CARM1Q86X55 608 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 EPHX4Q8IUS5 362 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 HOMEZQ8IX15 550 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 DDIASQ8IXT1 998 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 LINC01356Q8N9X3 169 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 POMGNT2Q8NAT1 580 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 OR9K2Q8NGE7 335 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 OR8J2Q8NGG1 315 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 OR1K1Q8NGR3 316 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 ZNF563Q8TA94 476 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 ZFAND2BQ8WV99 257 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 XAGE5Q8WWM1 108 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 NEU4Q8WWR8 484 aaPredicted RBP5.29□□□□□ -1.56
VRK3-220ENST00000600259 PMM1Q92871 262 aa5.29□□□□□ -1.56
VRK3-220ENST00000600259 ROPN1LQ96C74 230 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms